Experiment set2IT047 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS08725 +2.3 16.9 flippase compare
MMJJ_RS00415 +2.2 10.9 DedA family protein compare
MMJJ_RS08720 +1.9 15.8 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS04215 +1.7 13.6 DMT family transporter compare
MMJJ_RS04720 +1.6 1.7 IMP dehydrogenase compare
MMJJ_RS08730 +1.3 9.3 glycosyltransferase family 4 protein compare
MMJJ_RS07030 +1.2 10.3 hypothetical protein compare
MMJJ_RS08760 +1.2 7.9 glycosyltransferase family 9 protein compare
MMJJ_RS08750 +1.2 9.2 glycosyltransferase compare
MMJJ_RS08715 +1.2 6.1 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS00480 +1.1 7.8 flippase compare
MMJJ_RS04480 +1.0 2.6 hypothetical protein compare
MMJJ_RS06210 +1.0 5.0 hypothetical protein compare
MMJJ_RS01210 +0.9 2.3 hypothetical protein compare
MMJJ_RS06130 +0.9 3.2 hypothetical protein compare
MMJJ_RS08040 +0.8 6.1 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS09380 +0.8 1.8 hypothetical protein compare
MMJJ_RS08775 +0.8 4.9 PfkB family carbohydrate kinase compare
MMJJ_RS03605 +0.8 2.8 TIGR00297 family protein compare
MMJJ_RS09265 +0.8 2.3 hypothetical protein compare
MMJJ_RS00525 +0.8 1.9 Dabb family protein compare
MMJJ_RS08710 +0.7 4.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS03205 +0.7 3.3 metallophosphoesterase compare
MMJJ_RS05870 +0.7 2.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06975 +0.7 1.8 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08765 +0.7 5.1 glycosyltransferase family 9 protein compare
MMJJ_RS05505 +0.7 6.7 hypothetical protein compare
MMJJ_RS01825 +0.7 2.2 DNA repair and recombination protein RadB compare
MMJJ_RS08780 +0.7 2.8 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS04180 +0.7 1.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS05510 +0.7 3.8 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06055 +0.7 3.8 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS05980 +0.7 3.3 DUF5400 domain-containing protein compare
MMJJ_RS09050 +0.7 2.1 hypothetical protein compare
MMJJ_RS03725 +0.6 1.9 sulfurtransferase TusA family protein compare
MMJJ_RS07280 +0.6 3.8 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS03185 +0.6 0.9 alanine--tRNA ligase compare
MMJJ_RS05035 +0.6 3.6 4Fe-4S binding protein compare
MMJJ_RS06105 +0.6 3.4 DUF99 family protein compare
MMJJ_RS08785 +0.6 2.7 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS05700 +0.6 3.6 metallophosphoesterase compare
MMJJ_RS08025 +0.6 1.7 hypothetical protein compare
MMJJ_RS01010 +0.6 5.3 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06465 +0.6 3.3 hypothetical protein compare
MMJJ_RS05335 +0.6 2.5 heavy metal-binding domain-containing protein compare
MMJJ_RS04825 +0.5 4.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS05695 +0.5 3.1 class III signal peptide-containing protein compare
MMJJ_RS05690 +0.5 4.7 hypothetical protein compare
MMJJ_RS04525 +0.5 2.2 hypothetical protein compare
MMJJ_RS06205 +0.5 2.8 EamA family transporter compare
MMJJ_RS06430 +0.5 2.7 haloacid dehalogenase compare
MMJJ_RS01920 +0.5 3.7 phosphoglycerate mutase compare
MMJJ_RS07270 +0.5 2.9 ribonuclease HII compare
MMJJ_RS04055 +0.5 2.1 hypothetical protein compare
MMJJ_RS08065 +0.5 0.7 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS06740 +0.5 2.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS06135 +0.5 3.3 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS02860 +0.5 1.0 site-specific integrase compare
MMJJ_RS04135 +0.5 2.4 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS05925 +0.5 2.5 DUF2099 family protein compare
MMJJ_RS07825 +0.5 1.7 YciI family protein compare
MMJJ_RS00440 +0.5 2.9 selenide, water dikinase SelD compare
MMJJ_RS06755 +0.5 3.0 diadenylate cyclase compare
MMJJ_RS07640 +0.5 4.0 cache domain-containing protein compare
MMJJ_RS07680 +0.4 2.9 glucose-6-phosphate isomerase compare
MMJJ_RS06275 +0.4 2.0 hypothetical protein compare
MMJJ_RS06450 +0.4 2.8 DUF3343 domain-containing protein compare
MMJJ_RS05985 +0.4 2.7 ABC transporter substrate-binding protein compare
MMJJ_RS07740 +0.4 2.4 DUF2334 domain-containing protein compare
MMJJ_RS06115 +0.4 2.9 pyruvate kinase compare
MMJJ_RS05915 +0.4 1.0 multiprotein bridging factor aMBF1 compare
MMJJ_RS06630 +0.4 3.2 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS03350 +0.4 0.8 hypothetical protein compare
MMJJ_RS06585 +0.4 2.5 alanine racemase compare
MMJJ_RS04245 +0.4 2.2 flavoprotein compare
MMJJ_RS06720 +0.4 2.8 mechanosensitive ion channel family protein compare
MMJJ_RS06470 +0.4 2.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS09390 +0.4 0.7 hypothetical protein compare
MMJJ_RS00170 +0.4 1.8 thioredoxin family protein compare
MMJJ_RS04875 +0.4 0.5 tRNA-Lys compare
MMJJ_RS09325 +0.4 1.6 hypothetical protein compare
MMJJ_RS09070 +0.4 1.8 hypothetical protein compare
MMJJ_RS03285 +0.4 1.5 gamma-glutamylcyclotransferase compare
MMJJ_RS05730 +0.4 2.7 TIM barrel protein compare
MMJJ_RS07635 +0.4 2.1 response regulator transcription factor compare
MMJJ_RS05525 +0.4 1.9 GTP-binding protein compare
MMJJ_RS06190 +0.4 2.7 7-cyano-7-deazaguanine synthase compare
MMJJ_RS08705 +0.4 2.4 AEC family transporter compare
MMJJ_RS05365 +0.4 1.9 DUF2798 domain-containing protein compare
MMJJ_RS06770 +0.4 2.8 hypothetical protein compare
MMJJ_RS04935 +0.4 1.6 4Fe-4S binding protein compare
MMJJ_RS05495 +0.4 2.3 MinD/ParA family protein compare
MMJJ_RS06495 +0.4 0.8 hypothetical protein compare
MMJJ_RS05890 +0.4 2.7 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS07905 +0.4 2.1 DUF89 domain-containing protein compare
MMJJ_RS05410 +0.4 1.9 RecB-family nuclease compare
MMJJ_RS09010 +0.4 1.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS09205 +0.4 1.3 hypothetical protein compare
MMJJ_RS08365 +0.4 1.2 DsrE family protein compare
MMJJ_RS01125 +0.4 1.3 hypothetical protein compare
MMJJ_RS06765 +0.4 2.8 hypothetical protein compare
MMJJ_RS06445 +0.4 3.0 hypothetical protein compare
MMJJ_RS07385 +0.4 2.3 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS07210 +0.3 2.0 AmmeMemoRadiSam system protein B compare
MMJJ_RS07255 +0.3 2.9 hypothetical protein compare
MMJJ_RS06675 +0.3 2.1 TIGR01212 family radical SAM protein compare
MMJJ_RS06080 +0.3 2.4 serine/threonine protein kinase compare
MMJJ_RS06460 +0.3 2.1 cytochrome c compare
MMJJ_RS03380 +0.3 1.0 hypothetical protein compare
MMJJ_RS05685 +0.3 1.3 class III signal peptide-containing protein compare
MMJJ_RS08370 +0.3 1.0 hypothetical protein compare
MMJJ_RS01285 +0.3 1.9 CopG family ribbon-helix-helix protein compare
MMJJ_RS05250 +0.3 1.7 HDIG domain-containing protein compare
MMJJ_RS02285 +0.3 1.2 class III signal peptide-containing protein compare
MMJJ_RS06160 +0.3 2.0 stage II sporulation protein M compare
MMJJ_RS07665 +0.3 2.7 formate dehydrogenase subunit alpha compare
MMJJ_RS08325 +0.3 0.4 glycosyltransferase family 2 protein compare
MMJJ_RS00540 +0.3 1.3 hypothetical protein compare
MMJJ_RS07830 +0.3 2.2 DUF1786 domain-containing protein compare
MMJJ_RS06120 +0.3 1.8 DUF4013 domain-containing protein compare
MMJJ_RS08690 +0.3 1.9 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS01590 +0.3 0.3 adenine phosphoribosyltransferase compare
MMJJ_RS01955 +0.3 2.5 hypothetical protein compare
MMJJ_RS00420 +0.3 1.3 CBS domain-containing protein compare
MMJJ_RS07660 +0.3 1.5 carbonic anhydrase compare
MMJJ_RS06810 +0.3 2.2 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS05965 +0.3 2.4 MFS transporter compare
MMJJ_RS07790 +0.3 2.0 hypothetical protein compare
MMJJ_RS01650 +0.3 2.5 acetolactate synthase large subunit compare
MMJJ_RS05240 +0.3 2.3 type II secretion system F family protein compare
MMJJ_RS01060 +0.3 1.2 ABC transporter ATP-binding protein compare
MMJJ_RS03360 +0.3 0.4 hypothetical protein compare
MMJJ_RS02000 +0.3 0.9 AzlD domain-containing protein compare
MMJJ_RS08580 +0.3 1.1 YkgJ family cysteine cluster protein compare
MMJJ_RS02095 +0.3 1.8 DUF2124 family protein compare
MMJJ_RS05190 +0.3 1.4 gamma carbonic anhydrase family protein compare
MMJJ_RS07610 +0.3 1.3 DUF2119 domain-containing protein compare
MMJJ_RS05350 +0.3 1.7 DUF192 domain-containing protein compare
MMJJ_RS04105 +0.3 2.1 prepilin peptidase compare
MMJJ_RS07500 +0.3 1.7 hypothetical protein compare
MMJJ_RS05195 +0.3 0.8 hypothetical protein compare
MMJJ_RS06440 +0.3 1.5 DUF4870 domain-containing protein compare
MMJJ_RS04090 +0.3 2.1 hypothetical protein compare
MMJJ_RS07420 +0.3 1.4 protease complex subunit PrcB family protein compare
MMJJ_RS08075 +0.3 1.8 ATP-dependent DNA helicase compare
MMJJ_RS05880 +0.3 2.2 hypothetical protein compare
MMJJ_RS02905 +0.3 0.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS06960 +0.3 2.2 CAP domain-containing protein compare
MMJJ_RS05500 +0.3 2.2 hypothetical protein compare
MMJJ_RS07970 +0.3 0.3 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS05885 +0.3 2.0 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS07390 +0.3 1.8 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS09405 +0.3 0.8 hypothetical protein compare
MMJJ_RS04440 +0.3 1.1 hypothetical protein compare
MMJJ_RS09225 +0.2 1.1 hypothetical protein compare
MMJJ_RS08200 +0.2 1.9 surface protein, anchor region compare
MMJJ_RS04780 +0.2 0.8 nucleic acid-binding protein compare
MMJJ_RS07920 +0.2 1.7 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS03690 +0.2 1.1 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS08385 +0.2 1.4 class II SORL domain-containing protein compare
MMJJ_RS07650 +0.2 1.8 formate/nitrite transporter family protein compare
MMJJ_RS05940 +0.2 1.4 HAD family hydrolase compare
MMJJ_RS07620 +0.2 1.6 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS03370 +0.2 0.7 hypothetical protein compare
MMJJ_RS09210 +0.2 1.6 lysine exporter LysO family protein compare
MMJJ_RS05400 +0.2 0.8 CoA-binding protein compare
MMJJ_RS01840 +0.2 1.3 flavodoxin family protein compare
MMJJ_RS07235 +0.2 1.7 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS04845 +0.2 1.7 ABC transporter substrate-binding protein compare
MMJJ_RS01110 +0.2 0.7 hypothetical protein compare
MMJJ_RS06455 +0.2 1.5 YeeE/YedE family protein compare
MMJJ_RS05205 +0.2 1.5 DUF2118 domain-containing protein compare
MMJJ_RS00290 +0.2 1.4 CheF family chemotaxis protein compare
MMJJ_RS05820 +0.2 1.3 DUF2304 domain-containing protein compare
MMJJ_RS07810 +0.2 1.2 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS04065 +0.2 1.4 hypothetical protein compare
MMJJ_RS02185 +0.2 1.2 TIGR00296 family protein compare
MMJJ_RS06830 +0.2 0.9 4Fe-4S binding protein compare
MMJJ_RS04785 +0.2 1.2 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS07365 +0.2 1.4 CatB-related O-acetyltransferase compare
MMJJ_RS05875 +0.2 1.9 hypothetical protein compare
MMJJ_RS09155 +0.2 1.5 RluA family pseudouridine synthase compare
MMJJ_RS01380 +0.2 1.2 DUF1890 domain-containing protein compare
MMJJ_RS09365 +0.2 0.5 hypothetical protein compare
MMJJ_RS07230 +0.2 1.2 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS03700 +0.2 1.1 hypothetical protein compare
MMJJ_RS03410 +0.2 0.5 hypothetical protein compare
MMJJ_RS05605 +0.2 0.9 hypothetical protein compare
MMJJ_RS06045 +0.2 1.1 hypothetical protein compare
MMJJ_RS09020 +0.2 0.8 hypothetical protein compare
MMJJ_RS09355 +0.2 0.9 hypothetical protein compare
MMJJ_RS01515 +0.2 0.8 DUF2178 domain-containing protein compare
MMJJ_RS04955 +0.2 1.2 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS06100 +0.2 1.2 rubrerythrin compare
MMJJ_RS03385 +0.2 1.1 hypothetical protein compare
MMJJ_RS00870 +0.2 0.9 F420-nonreducing hydrogenase compare
MMJJ_RS07670 +0.2 1.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS00555 +0.2 1.2 hypothetical protein compare
MMJJ_RS02005 +0.2 1.2 AzlC family ABC transporter permease compare
MMJJ_RS00910 +0.2 1.4 right-handed parallel beta-helix repeat-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t2 experiments