Experiment set2IT044 for Acidovorax sp. GW101-3H11

LB with Phosphomycin disodium salt 0.06 mg/ml

Group: stress
Media: LB + Phosphomycin disodium salt (0.06 mg/ml)
Culturing: acidovorax_3H11_ML3a, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 5/11/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 4 genes in this experiment

For stress Phosphomycin disodium salt in Acidovorax sp. GW101-3H11

For stress Phosphomycin disodium salt across organisms

SEED Subsystems

Subsystem	#Specific
YjeE	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pentose phosphate pathway
• Other glycan degradation
• Nucleotide sugars metabolism
• Aminosugars metabolism
• Glycosaminoglycan degradation
• Lipopolysaccharide biosynthesis
• Glycosphingolipid biosynthesis - globo series
• Glycosphingolipid biosynthesis - ganglio series
• Nicotinate and nicotinamide metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
chitin degradation II (Vibrio)	6	3	2
peptidoglycan recycling II	10	5	2
peptidoglycan recycling I	14	9	2
chitin degradation III (Serratia)	7	3	1