Experiment set2IT043 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
AO353_13070 -4.6 -5.4 phosphoserine phosphatase compare
AO353_10670 -4.1 -6.9 shikimate dehydrogenase compare
AO353_20665 -4.0 -10.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_05115 -4.0 -9.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_02070 -3.9 -5.3 prephenate dehydratase compare
AO353_20625 -3.8 -3.7 3-isopropylmalate dehydratase compare
AO353_20540 -3.8 -8.3 aromatic amino acid aminotransferase compare
AO353_20695 -3.7 -7.0 O-succinylhomoserine sulfhydrylase compare
AO353_02075 -3.7 -9.8 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_12085 -3.7 -8.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_07210 -3.6 -5.5 indole-3-glycerol-phosphate synthase compare
AO353_12070 -3.6 -8.4 imidazoleglycerol-phosphate dehydratase compare
AO353_07230 -3.6 -16.0 anthranilate synthase compare
AO353_13165 -3.6 -5.5 ATP phosphoribosyltransferase regulatory subunit compare
AO353_08185 -3.6 -9.8 methionine biosynthesis protein MetW compare
AO353_12075 -3.6 -7.3 imidazole glycerol phosphate synthase subunit HisH compare
AO353_05110 -3.6 -10.3 histidinol dehydrogenase compare
AO353_20635 -3.6 -11.9 3-isopropylmalate dehydrogenase compare
AO353_08685 -3.5 -8.5 N-acetylglutamate synthase compare
AO353_07220 -3.5 -8.7 anthranilate synthase compare
AO353_00430 -3.5 -2.4 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_14505 -3.4 -12.3 ketol-acid reductoisomerase compare
AO353_03795 -3.4 -4.1 fumarate hydratase compare
AO353_08180 -3.4 -13.0 homoserine O-acetyltransferase compare
AO353_12090 -3.4 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
AO353_07155 -3.3 -6.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_20620 -3.3 -7.6 isopropylmalate isomerase compare
AO353_08475 -3.3 -9.5 phosphoserine phosphatase compare
AO353_14500 -3.2 -6.2 acetolactate synthase 3 regulatory subunit compare
AO353_08345 -3.2 -9.2 dihydroxy-acid dehydratase compare
AO353_04155 -3.2 -12.0 ornithine carbamoyltransferase compare
AO353_14495 -3.2 -9.3 acetolactate synthase 3 catalytic subunit compare
AO353_07215 -3.1 -8.0 anthranilate phosphoribosyltransferase compare
AO353_12360 -3.0 -10.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_09240 -3.0 -2.9 acetylglutamate kinase compare
AO353_15925 -2.9 -13.3 2-isopropylmalate synthase compare
AO353_12365 -2.9 -4.6 phosphoribosyl-AMP cyclohydrolase compare
AO353_19060 -2.8 -5.5 CysB family transcriptional regulator compare
AO353_12500 -2.8 -1.9 shikimate kinase compare
AO353_11775 -2.7 -7.8 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_12460 -2.7 -9.1 malate dehydrogenase compare
AO353_08015 -2.7 -7.5 5,10-methylenetetrahydrofolate reductase compare
AO353_09000 -2.7 -5.6 argininosuccinate lyase compare
AO353_04105 -2.6 -9.2 argininosuccinate synthase compare
AO353_13100 -2.6 -1.8 GTPase RsgA compare
AO353_14400 -2.6 -4.8 Fis family transcriptional regulator compare
AO353_02685 -2.5 -4.7 phosphoribosylglycinamide formyltransferase compare
AO353_09285 -2.4 -11.6 reactive intermediate/imine deaminase compare
AO353_22800 -2.4 -4.1 sulfite reductase compare
AO353_10710 -2.4 -6.1 tryptophan synthase subunit beta compare
AO353_05105 -2.4 -10.3 histidinol-phosphate aminotransferase compare
AO353_08510 -2.4 -5.8 3-phosphoglycerate dehydrogenase compare
AO353_07355 -2.3 -5.2 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_08165 -2.3 -3.7 pyrroline-5-carboxylate reductase compare
AO353_09945 -2.2 -5.4 LysR family transcriptional regulator compare
AO353_16940 -2.2 -5.8 deoxycytidine triphosphate deaminase compare
AO353_27650 -2.1 -5.4 cell division protein FtsK compare
AO353_06495 -2.1 -5.9 gamma-glutamyl phosphate reductase compare
AO353_02250 -2.1 -4.7 chorismate synthase compare
AO353_14370 -2.1 -7.3 glucose-6-phosphate isomerase compare
AO353_04355 -2.1 -2.4 homoserine dehydrogenase compare
AO353_10510 -2.1 -2.0 benzoate transporter compare
AO353_09890 -2.0 -5.8 phosphate ABC transporter ATP-binding protein compare
AO353_12115 -1.9 -3.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_10705 -1.8 -4.6 tryptophan synthase subunit alpha compare
AO353_08780 -1.8 -7.3 5-formyltetrahydrofolate cyclo-ligase compare
AO353_00865 -1.8 -8.7 phosphoenolpyruvate synthase compare
AO353_00825 -1.8 -3.7 porin compare
AO353_20175 -1.7 -3.9 ATP-dependent Clp protease proteolytic subunit compare
AO353_16280 -1.7 -6.7 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 1 (from data) compare
AO353_01375 -1.7 -6.1 phosphate acyltransferase compare
AO353_11165 -1.7 -8.8 hypothetical protein compare
AO353_16285 -1.7 -7.9 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) conserved
AO353_11770 -1.7 -2.2 molecular chaperone Hsp33 compare
AO353_14115 -1.6 -5.9 gamma-glutamyl kinase compare
AO353_16270 -1.6 -11.7 histidine kinase conserved
AO353_03585 -1.6 -3.0 ATP-dependent DNA helicase RuvA compare
AO353_05625 -1.6 -1.6 transcription elongation factor GreA compare
AO353_14940 -1.5 -3.8 malate:quinone oxidoreductase compare
AO353_24260 -1.5 -2.5 hypothetical protein compare
AO353_16290 -1.5 -8.8 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) conserved
AO353_00495 -1.5 -2.4 DNA topoisomerase I compare
AO353_06040 -1.5 -3.1 exodeoxyribonuclease V subunit alpha compare
AO353_12790 -1.4 -2.2 hypothetical protein compare
AO353_12345 -1.4 -2.2 twin-arginine protein translocation system subunit TatC compare
AO353_16210 -1.4 -9.3 XRE family transcriptional regulator compare
AO353_21625 -1.4 -2.5 Fe/S biogenesis protein NfuA compare
AO353_02975 -1.4 -3.0 aspartate kinase compare
AO353_20200 -1.4 -3.7 peptidylprolyl isomerase compare
AO353_12105 -1.4 -5.2 peptidase S41 compare
AO353_13245 -1.3 -6.1 hypothetical protein compare
AO353_16265 -1.3 -5.1 Fis family transcriptional regulator compare
AO353_03580 -1.3 -3.3 ATP-dependent DNA helicase RuvB compare
AO353_06045 -1.3 -5.4 exodeoxyribonuclease V subunit beta compare
AO353_15185 -1.3 -4.2 ATPase compare
AO353_14395 -1.3 -3.7 poly(A) polymerase compare
AO353_08130 -1.3 -2.4 uracil phosphoribosyltransferase compare
AO353_23495 -1.3 -2.5 SAM-dependent methyltransferase compare
AO353_13395 -1.2 -2.5 protein hupE compare
AO353_13640 -1.2 -3.8 histidine kinase compare
AO353_06155 -1.2 -6.5 copper-transporting ATPase compare
AO353_05075 -1.2 -7.1 adenylylsulfate kinase compare
AO353_23620 -1.2 -2.6 hypothetical protein compare
AO353_19360 -1.2 -2.4 peroxiredoxin compare
AO353_01410 -1.2 -2.9 ribonuclease E compare
AO353_11750 -1.1 -2.4 ATPase compare
AO353_07075 -1.1 -3.7 elongation factor Tu compare
AO353_14405 -1.1 -7.5 ATPase compare
AO353_03590 -1.1 -2.5 crossover junction endodeoxyribonuclease RuvC compare
AO353_02720 -1.1 -4.3 cysteine synthase compare
AO353_18715 -1.1 -1.3 histidine kinase compare
AO353_20630 -1.1 -5.8 SAM-dependent methyltransferase compare
AO353_13390 -1.1 -6.3 N-acylglucosamine 2-epimerase compare
AO353_20565 -1.1 -1.7 tRNA-Ala compare
AO353_09950 -1.1 -3.6 aspartate ammonia-lyase compare
AO353_07325 -1.1 -1.9 diadenosine tetraphosphatase compare
AO353_22920 -1.1 -4.1 GntR family transcriptional regulator compare
AO353_03670 -1.1 -3.7 ornithine acetyltransferase compare
AO353_11530 -1.1 -5.9 diguanylate cyclase compare
AO353_14775 -1.0 -4.4 hypothetical protein compare
AO353_05080 -1.0 -6.7 sulfate adenylyltransferase compare
AO353_09905 -1.0 -6.2 phosphate-binding protein compare
AO353_02060 -1.0 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_09135 -1.0 -2.1 cytochrome C compare
AO353_13220 -1.0 -4.3 hypothetical protein compare
AO353_10430 -1.0 -2.7 chromosome partitioning protein ParB compare
AO353_10495 -1.0 -2.8 serine hydroxymethyltransferase compare
AO353_13080 -1.0 -5.0 thiosulfate sulfurtransferase compare
AO353_03615 -1.0 -2.1 cold-shock protein compare
AO353_15250 -1.0 -2.4 cytochrome B compare
AO353_03365 -1.0 -5.4 transcriptional regulator compare
AO353_03605 -1.0 -1.3 FmdB family transcriptional regulator compare
AO353_10515 -0.9 -5.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_03715 -0.9 -1.8 H-NS histone compare
AO353_10945 -0.9 -1.9 cytochrome C compare
AO353_20095 -0.9 -3.7 histidine kinase compare
AO353_04970 -0.9 -2.6 cell division protein DedD compare
AO353_02465 -0.9 -2.0 hypothetical protein compare
AO353_00635 -0.9 -2.4 hypothetical protein compare
AO353_24440 -0.9 -1.8 reactive intermediate/imine deaminase compare
AO353_10520 -0.9 -3.9 GntR family transcriptional regulator compare
AO353_10055 -0.9 -6.1 DNA helicase II compare
AO353_08485 -0.9 -6.4 threonine dehydratase compare
AO353_02000 -0.9 -2.8 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_00750 -0.9 -2.3 GntR family transcriptional regulator compare
AO353_18540 -0.9 -2.0 pseudouridine synthase compare
AO353_00460 -0.8 -1.4 TetR family transcriptional regulator compare
AO353_06050 -0.8 -3.8 exodeoxyribonuclease V subunit gamma compare
AO353_12395 -0.8 -2.3 poly(3-hydroxyalkanoate) granule-associated protein PhaF compare
AO353_14150 -0.8 -1.2 peptidylprolyl isomerase compare
AO353_12935 -0.8 -2.6 glycosyltransferase compare
AO353_27400 -0.8 -2.2 hypothetical protein compare
AO353_04175 -0.8 -2.3 glycerol uptake facilitator GlpF compare
AO353_20185 -0.8 -3.7 DNA-binding protein compare
AO353_13140 -0.8 -3.4 tRNA dimethylallyltransferase compare
AO353_14740 -0.8 -2.1 GTP-binding protein compare
AO353_16845 -0.8 -4.6 LysR family transcriptional regulator compare
AO353_16740 -0.8 -2.5 phage tail protein compare
AO353_22855 -0.8 -2.3 hypothetical protein compare
AO353_01725 -0.8 -1.3 phosphohistidine phosphatase compare
AO353_28425 -0.8 -2.4 TetR family transcriptional regulator compare
AO353_15445 -0.8 -2.2 disulfide bond formation protein B compare
AO353_16805 -0.8 -3.2 recombinase RecA compare
AO353_09900 -0.8 -5.1 phosphate ABC transporter permease compare
AO353_18305 -0.8 -2.2 RNA helicase compare
AO353_09050 -0.8 -2.2 recombinase XerC compare
AO353_05145 -0.8 -3.1 ABC transporter permease compare
AO353_15725 -0.8 -2.6 hypothetical protein compare
AO353_09955 -0.8 -6.1 sodium:alanine symporter compare
AO353_00650 -0.8 -1.8 cytochrome biogenesis protein compare
AO353_03770 -0.8 -2.8 hypothetical protein compare
AO353_27415 -0.8 -2.0 hypothetical protein compare
AO353_13155 -0.8 -2.3 hypothetical protein compare
AO353_21615 -0.8 -5.1 methionine synthase compare
AO353_06850 -0.8 -2.8 MFS transporter compare
AO353_05150 -0.8 -2.8 ABC transporter ATP-binding protein compare
AO353_26090 -0.8 -2.0 hypothetical protein compare
AO353_04565 -0.7 -3.1 nucleoid-associated protein compare
AO353_02810 -0.7 -3.9 histidine kinase compare
AO353_06100 -0.7 -1.6 thymidylate synthase compare
AO353_04220 -0.7 -3.2 chemotaxis protein CheY compare
AO353_06720 -0.7 -1.5 NrdR family transcriptional regulator compare
AO353_10825 -0.7 -5.7 hypothetical protein compare
AO353_09720 -0.7 -1.1 hypothetical protein compare
AO353_20370 -0.7 -2.0 MerR family transcriptional regulator compare
AO353_16530 -0.7 -1.4 ribonuclease HII compare
AO353_07935 -0.7 -2.7 hypothetical protein compare
AO353_11730 -0.7 -4.3 glutamate--cysteine ligase compare
AO353_27130 -0.7 -1.5 hypothetical protein compare
AO353_15730 -0.7 -1.3 hypothetical protein compare
AO353_12560 -0.7 -3.3 type II secretion system protein GspG compare
AO353_20680 -0.7 -2.4 cell division protein compare
AO353_02280 -0.7 -1.1 DNA mismatch repair protein MutS compare
AO353_02330 -0.7 -2.0 allantoicase compare
AO353_26045 -0.7 -1.4 hypothetical protein compare
AO353_22990 -0.7 -2.8 phospholipid-binding protein compare
AO353_20800 -0.7 -1.3 hypothetical protein compare
AO353_00620 -0.7 -1.5 cytochrome C oxidase Cbb3 compare
AO353_12930 -0.7 -1.6 GlcNAc-PI de-N-acetylase compare
AO353_12710 -0.7 -1.3 thioredoxin compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms