Experiment set2IT043 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
AO353_02735 +2.0 18.2 chemotaxis protein CheY compare
AO353_21830 +1.8 15.9 chemotaxis protein CheY compare
AO353_19340 +1.4 12.3 amino acid ABC transporter substrate-binding protein compare
AO353_11945 +1.4 2.1 4-oxalocrotonate tautomerase compare
AO353_20925 +1.3 2.7 hypothetical protein compare
AO353_09745 +1.2 1.8 hypothetical protein compare
AO353_04190 +1.1 3.2 glycerol-3-phosphate dehydrogenase compare
AO353_06745 +1.0 3.1 zinc-binding protein compare
AO353_09885 +0.9 2.8 transcriptional regulator PhoU compare
AO353_26525 +0.9 2.3 hypothetical protein compare
AO353_11155 +0.9 8.1 thioesterase compare
AO353_20425 +0.9 2.4 ArsC family transcriptional regulator compare
AO353_09875 +0.9 2.5 hypothetical protein compare
AO353_27855 +0.9 2.4 MarR family transcriptional regulator compare
AO353_19335 +0.9 6.4 TetR family transcriptional regulator compare
AO353_16615 +0.8 7.0 RNA polymerase sigma factor RpoS compare
AO353_20000 +0.8 3.3 phosphoribosyltransferase compare
AO353_02570 +0.8 2.0 hypothetical protein compare
AO353_09060 +0.8 2.8 hypothetical protein compare
AO353_08465 +0.8 7.2 phosphoenolpyruvate-protein phosphotransferase compare
AO353_24745 +0.8 2.0 hypothetical protein compare
AO353_00195 +0.8 2.0 virion morphogenesis protein compare
AO353_09660 +0.8 1.5 hypothetical protein compare
AO353_00235 +0.8 2.7 transcriptional regulator compare
AO353_19070 +0.8 2.9 hypothetical protein compare
AO353_09560 +0.7 1.6 type VI secretion protein compare
AO353_03830 +0.7 2.0 antibiotic biosynthesis monooxygenase compare
AO353_11160 +0.7 4.2 GntR family transcriptional regulator compare
AO353_12030 +0.7 2.7 hypothetical protein compare
AO353_16645 +0.6 2.6 hypothetical protein compare
AO353_27585 +0.6 1.4 DNA repair protein compare
AO353_27525 +0.6 1.8 AraC family transcriptional regulator compare
AO353_24990 +0.6 2.5 translation elongation factor compare
AO353_19750 +0.6 1.5 diaminopimelate epimerase compare
AO353_15480 +0.6 1.7 hypothetical protein compare
AO353_03515 +0.6 1.4 cold-shock protein compare
AO353_16355 +0.6 3.0 TetR family transcriptional regulator compare
AO353_18745 +0.6 1.2 flagellar biosynthesis protein flip compare
AO353_23350 +0.6 2.0 hypothetical protein compare
AO353_24605 +0.6 1.9 hypothetical protein compare
AO353_26220 +0.6 1.8 hypothetical protein compare
AO353_09275 +0.6 2.0 DNA-directed RNA polymerase subunit omega compare
AO353_02885 +0.6 1.7 flagellar biosynthesis protein FlgN compare
AO353_09490 +0.6 2.3 hypothetical protein compare
AO353_25585 +0.6 1.3 argininosuccinate lyase compare
AO353_13660 +0.6 3.7 tRNA-dihydrouridine synthase B compare
AO353_13300 +0.6 1.6 LOG family protein compare
AO353_00955 +0.6 1.2 cytotoxic translational repressor of toxin-antitoxin stability system compare
AO353_10445 +0.6 1.1 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_22500 +0.5 1.3 hypothetical protein compare
AO353_17085 +0.5 1.7 hypothetical protein compare
AO353_04340 +0.5 1.4 hypothetical protein compare
AO353_19505 +0.5 1.7 FAD-dependent oxidoreductase compare
AO353_24765 +0.5 1.9 GCN5 family acetyltransferase compare
AO353_16375 +0.5 1.6 hypothetical protein compare
AO353_06480 +0.5 1.4 50S rRNA methyltransferase compare
AO353_18130 +0.5 1.4 hypothetical protein compare
AO353_00440 +0.5 2.2 hypothetical protein compare
AO353_26835 +0.5 1.9 transcriptional regulator compare
AO353_12570 +0.5 1.6 type II secretion system protein GspI compare
AO353_19020 +0.5 1.7 hypothetical protein compare
AO353_28555 +0.5 1.2 LysR family transcriptional regulator compare
AO353_05280 +0.5 1.4 4-carboxymuconolactone decarboxylase compare
AO353_22360 +0.5 1.4 ABC transporter ATP-binding protein compare
AO353_16655 +0.5 1.9 phage baseplate protein compare
AO353_18985 +0.5 1.7 hypothetical protein compare
AO353_22370 +0.5 1.8 branched-chain amino acid ABC transporter substrate-binding protein compare
AO353_11190 +0.5 4.0 ABC transporter compare
AO353_06125 +0.5 2.1 ArsR family transcriptional regulator compare
AO353_00905 +0.5 2.0 GntR family transcriptional regulator compare
AO353_21640 +0.5 1.1 cobalt transporter compare
AO353_02520 +0.5 1.4 sodium transporter compare
AO353_00255 +0.5 1.6 hypothetical protein compare
AO353_13885 +0.5 2.2 bile acid:sodium symporter compare
AO353_07445 +0.5 1.0 pyrroloquinoline quinone biosynthesis protein PqqD compare
AO353_19685 +0.5 1.5 alkylhydroperoxidase compare
AO353_19045 +0.5 2.9 2-dehydropantoate 2-reductase compare
AO353_04810 +0.5 1.1 hypothetical protein compare
AO353_22255 +0.5 2.5 chloroperoxidase compare
AO353_00260 +0.5 1.2 hypothetical protein compare
AO353_01520 +0.5 1.8 hypothetical protein compare
AO353_24815 +0.4 1.6 amino acid ABC transporter substrate-binding protein compare
AO353_17855 +0.4 1.4 ribonuclease D compare
AO353_24915 +0.4 0.8 hypothetical protein compare
AO353_03370 +0.4 1.9 aldose epimerase compare
AO353_06250 +0.4 1.9 GNAT family acetyltransferase compare
AO353_17005 +0.4 1.5 hypothetical protein compare
AO353_17590 +0.4 2.1 transcriptional regulator compare
AO353_11185 +0.4 3.4 channel protein TolC compare
AO353_15645 +0.4 1.6 hypothetical protein compare
AO353_00105 +0.4 0.6 hypothetical protein compare
AO353_26260 +0.4 2.3 hypothetical protein compare
AO353_07915 +0.4 2.0 hypothetical protein compare
AO353_17940 +0.4 1.4 hypothetical protein compare
AO353_16070 +0.4 1.8 PadR family transcriptional regulator compare
AO353_23440 +0.4 1.1 hypothetical protein compare
AO353_00505 +0.4 1.8 3-ketoacyl-CoA thiolase compare
AO353_27905 +0.4 2.0 N-formylglutamate amidohydrolase compare
AO353_18765 +0.4 1.2 hypothetical protein compare
AO353_22870 +0.4 1.2 oxidoreductase compare
AO353_18600 +0.4 1.8 flagellar basal-body rod protein FlgG compare
AO353_16385 +0.4 1.9 hypothetical protein compare
AO353_14915 +0.4 1.2 (2Fe-2S)-binding protein compare
AO353_27500 +0.4 0.9 hypothetical protein compare
AO353_12015 +0.4 1.3 antitoxin compare
AO353_28380 +0.4 1.3 GntR family transcriptional regulator compare
AO353_25355 +0.4 1.2 hypothetical protein compare
AO353_12990 +0.4 1.8 multidrug DMT transporter compare
AO353_07195 +0.4 1.9 peroxiredoxin compare
AO353_08855 +0.4 1.6 GntR family transcriptional regulator compare
AO353_24560 +0.4 1.6 transcriptional regulator compare
AO353_25660 +0.4 1.6 ABC transporter substrate-binding protein compare
AO353_11340 +0.4 0.8 MarR family transcriptional regulator compare
AO353_12720 +0.4 1.4 hypothetical protein compare
AO353_23840 +0.4 1.7 hypothetical protein compare
AO353_15280 +0.4 1.8 hypothetical protein compare
AO353_19765 +0.4 2.3 hypothetical protein compare
AO353_12610 +0.4 2.5 3-ketoacyl-ACP reductase compare
AO353_21595 +0.4 2.3 serine/threonine protein kinase compare
AO353_22725 +0.4 1.8 hypothetical protein compare
AO353_16870 +0.4 1.9 acetyltransferase compare
AO353_21410 +0.4 1.0 hypothetical protein compare
AO353_01065 +0.4 2.5 acetyl-CoA acetyltransferase compare
AO353_26945 +0.4 1.0 transcriptional regulator compare
AO353_19250 +0.4 0.8 molybdenum cofactor guanylyltransferase compare
AO353_01930 +0.4 1.8 2-hydroxy-3-oxopropionate reductase compare
AO353_24805 +0.4 1.8 TetR family transcriptional regulator compare
AO353_05435 +0.4 2.3 choline ABC transporter permease compare
AO353_26870 +0.4 1.2 AP endonuclease compare
AO353_12580 +0.4 0.7 type II secretory protein PulK compare
AO353_01135 +0.4 0.5 enoyl-CoA hydratase compare
AO353_06490 +0.4 1.2 nicotinate-nucleotide adenylyltransferase compare
AO353_06030 +0.4 2.6 amino acid ABC transporter substrate-binding protein compare
AO353_21345 +0.4 2.3 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) compare
AO353_21285 +0.4 1.9 amidase compare
AO353_27590 +0.4 2.1 hypothetical protein compare
AO353_03135 +0.4 1.4 hypothetical protein compare
AO353_05270 +0.4 2.0 hypothetical protein compare
AO353_26165 +0.4 1.1 hypothetical protein compare
AO353_21350 +0.4 1.3 methylmalonate-semialdehyde dehydrogenase compare
AO353_02940 +0.4 1.0 DNA-binding protein compare
AO353_24000 +0.4 1.4 isochorismate synthase compare
AO353_05070 +0.4 1.6 acyltransferase compare
AO353_13670 +0.4 1.6 ribosomal protein L11 methyltransferase compare
AO353_22955 +0.4 1.3 tRNA hydroxylase compare
AO353_23985 +0.4 1.6 isochorismate-pyruvate lyase compare
AO353_22675 +0.4 1.9 hypothetical protein compare
AO353_19710 +0.4 2.2 hypothetical protein compare
AO353_21100 +0.4 1.1 DNA-binding protein compare
AO353_11195 +0.4 3.0 hemolysin secretion protein D compare
AO353_14970 +0.4 1.2 hypothetical protein compare
AO353_17365 +0.3 1.1 hypothetical protein compare
AO353_03430 +0.3 1.2 methylglyoxal synthase compare
AO353_15000 +0.3 1.3 glycerate dehydrogenase compare
AO353_23400 +0.3 0.9 hypothetical protein compare
AO353_28490 +0.3 2.0 MFS transporter compare
AO353_22270 +0.3 1.2 antibiotic biosynthesis monooxygenase compare
AO353_02425 +0.3 2.1 spermidine/putrescine ABC transporter ATP-binding protein compare
AO353_18255 +0.3 2.3 LysR family transcriptional regulator compare
AO353_18560 +0.3 0.9 class I peptide chain release factor compare
AO353_23875 +0.3 1.4 ketosteroid isomerase compare
AO353_04930 +0.3 0.9 flavodoxin compare
AO353_05490 +0.3 1.9 transcriptional regulator compare
AO353_08960 +0.3 1.5 peptidylprolyl isomerase compare
AO353_25855 +0.3 1.9 peptide ABC transporter substrate-binding protein compare
AO353_00385 +0.3 1.6 glycerophosphodiester phosphodiesterase compare
AO353_14995 +0.3 1.6 16S rRNA methyltransferase compare
AO353_03920 +0.3 1.5 acetyltransferase compare
AO353_22470 +0.3 1.8 MFS transporter compare
AO353_27460 +0.3 0.9 hypothetical protein compare
AO353_17065 +0.3 2.6 hypothetical protein compare
AO353_16345 +0.3 1.1 energy transducer TonB compare
AO353_11180 +0.3 3.1 large adhesive protein compare
AO353_07755 +0.3 1.7 betainyl-CoA thiolase (EC 3.1.2.-) (from data) compare
AO353_20100 +0.3 1.4 hypothetical protein compare
AO353_28215 +0.3 1.9 4-aminobutyrate aminotransferase compare
AO353_26840 +0.3 1.2 RND transporter compare
AO353_02220 +0.3 0.7 hypothetical protein compare
AO353_26235 +0.3 1.6 hypothetical protein compare
AO353_23105 +0.3 2.0 dienelactone hydrolase compare
AO353_05920 +0.3 1.8 hypothetical protein compare
AO353_03510 +0.3 1.1 glycine cleavage system protein T compare
AO353_06725 +0.3 0.8 hypothetical protein compare
AO353_04125 +0.3 2.0 alkyl hydroperoxide reductase compare
AO353_01055 +0.3 2.8 AraC family transcriptional regulator compare
AO353_06135 +0.3 1.4 NADPH:quinone reductase compare
AO353_24170 +0.3 1.4 hypothetical protein compare
AO353_22890 +0.3 1.8 secretion protein HlyD compare
AO353_03120 +0.3 1.2 hypothetical protein compare
AO353_13015 +0.3 1.5 nitrate reductase compare
AO353_25010 +0.3 2.1 LysR family transcriptional regulator compare
AO353_19565 +0.3 1.0 vanillate O-demethylase oxidoreductase VanB compare
AO353_17100 +0.3 0.9 hypothetical protein compare
AO353_09495 +0.3 1.5 hypothetical protein compare
AO353_27530 +0.3 1.5 acetyl-CoA acetyltransferase compare
AO353_00665 +0.3 1.1 adenine phosphoribosyltransferase compare
AO353_08775 +0.3 0.9 cell division protein ZapA compare
AO353_20815 +0.3 0.9 LacI family transcriptional regulator compare
AO353_26180 +0.3 1.0 phage tail protein compare
AO353_17395 +0.3 1.6 methyltransferase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms