| | gene | name | fitness | t score | description | |
|---|
| Shewana3_0300 | glnA | +5.4 | 7.2 | glutamine synthetase (RefSeq) | compare |
| Shewana3_0197 | | +3.9 | 2.3 | elongation factor Tu (RefSeq) | compare |
| Shewana3_3728 | | +3.8 | 7.5 | twin arginine-targeting protein translocase (RefSeq) | compare |
| Shewana3_3811 | rpoZ | +3.3 | 2.3 | DNA-directed RNA polymerase subunit omega (RefSeq) | compare |
| Shewana3_1395 | | +3.2 | 1.6 | putative lipoprotein (RefSeq) | compare |
| Shewana3_2467 | | +3.2 | 5.0 | hypothetical protein (RefSeq) | compare |
| Shewana3_1005 | | +3.1 | 2.6 | CBS domain-containing protein (RefSeq) | compare |
| Shewana3_0547 | | +3.0 | 1.8 | histone family protein DNA-binding protein (RefSeq) | compare |
| Shewana3_3812 | | +3.0 | 3.8 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) | compare |
| Shewana3_1044 | deoD | +2.9 | 2.0 | purine nucleoside phosphorylase (RefSeq) | compare |
| Shewana3_2110 | | +2.8 | 2.3 | cytochrome c oxidase, cbb3-type, subunit III (RefSeq) | compare |
| Shewana3_0426 | aceE | +2.7 | 7.3 | pyruvate dehydrogenase subunit E1 (RefSeq) | compare |
| Shewana3_1862 | | +2.6 | 2.0 | methyl-accepting chemotaxis sensory transducer (RefSeq) | compare |
| Shewana3_3103 | | +2.5 | 1.9 | rhodanese domain-containing protein (RefSeq) | compare |
| Shewana3_1039 | | +2.5 | 4.2 | nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) | compare |
| Shewana3_1757 | | +2.5 | 2.4 | 17 kDa surface antigen (RefSeq) | compare |
| Shewana3_3035 | | +2.5 | 3.9 | hypothetical protein (RefSeq) | compare |
| Shewana3_2443 | | +2.5 | 11.1 | heat shock protein 90 (RefSeq) | compare |
| Shewana3_1182 | trmB | +2.3 | 1.7 | tRNA (guanine-N(7)-)-methyltransferase (RefSeq) | compare |
| Shewana3_1231 | | +2.3 | 2.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_1498 | | +2.3 | 0.9 | hypothetical protein (RefSeq) | compare |
| Shewana3_0672 | | +2.2 | 5.8 | RNA polymerase factor sigma-54 (RefSeq) | compare |
| Shewana3_2107 | | +2.2 | 8.2 | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | compare |
| Shewana3_2402 | | +2.1 | 1.0 | diacylglycerol kinase (RefSeq) | compare |
| Shewana3_2104 | | +2.1 | 2.4 | phage integrase family protein (RefSeq) | compare |
| Shewana3_1012 | | +2.1 | 6.6 | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | compare |
| Shewana3_3509 | | +2.1 | 4.2 | malate dehydrogenase (RefSeq) | compare |
| Shewana3_2422 | | +2.1 | 1.4 | hypothetical protein (RefSeq) | compare |
| Shewana3_3569 | | +2.0 | 7.2 | MATE efflux family protein (RefSeq) | compare |
| Shewana3_0427 | | +2.0 | 6.9 | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) | compare |
| Shewana3_1722 | | +2.0 | 1.1 | prolyl 4-hydroxylase, alpha subunit (RefSeq) | compare |
| Shewana3_1994 | | +2.0 | 1.7 | outer membrane efflux protein (RefSeq) | compare |
| Shewana3_0602 | | +2.0 | 7.8 | cytochrome b/b6 domain-containing protein (RefSeq) | compare |
| Shewana3_1946 | | +1.9 | 2.2 | response regulator receiver protein (RefSeq) | compare |
| Shewana3_0425 | pdhR | +1.9 | 3.2 | transcriptional regulator PdhR (RefSeq) | compare |
| Shewana3_2780 | phhB | +1.9 | 2.1 | pterin-4-alpha-carbinolamine dehydratase (RefSeq) | compare |
| Shewana3_1730 | | +1.9 | 0.8 | hypothetical protein (RefSeq) | compare |
| Shewana3_0041 | | +1.9 | 5.0 | coproporphyrinogen III oxidase (RefSeq) | compare |
| Shewana3_0148 | hslO | +1.9 | 4.4 | Hsp33-like chaperonin (RefSeq) | compare |
| Shewana3_2817 | | +1.9 | 8.6 | PII uridylyl-transferase (RefSeq) | compare |
| Shewana3_2120 | | +1.9 | 2.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_3730 | | +1.8 | 5.2 | Sec-independent protein translocase TatC (RefSeq) | compare |
| Shewana3_2112 | | +1.8 | 4.2 | heavy metal translocating P-type ATPase (RefSeq) | compare |
| Shewana3_0258 | | +1.8 | 9.0 | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | compare |
| Shewana3_3022 | acpS | +1.8 | 2.7 | 4'-phosphopantetheinyl transferase (RefSeq) | compare |
| Shewana3_2867 | | +1.8 | 1.6 | Fmu (Sun) domain-containing protein (RefSeq) | compare |
| Shewana3_0825 | | +1.8 | 3.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_3350 | | +1.8 | 7.5 | fructose-1,6-bisphosphate aldolase (RefSeq) | compare |
| Shewana3_1736 | | +1.8 | 3.7 | phosphoenolpyruvate synthase (RefSeq) | compare |
| Shewana3_2382 | minC | +1.8 | 2.6 | septum formation inhibitor (RefSeq) | compare |
| Shewana3_2589 | | +1.8 | 2.4 | type IV pilus assembly PilZ (RefSeq) | compare |
| Shewana3_3019 | | +1.7 | 2.9 | cytochrome c assembly protein (RefSeq) | compare |
| Shewana3_1528 | | +1.7 | 2.6 | short chain dehydrogenase (RefSeq) | compare |
| Shewana3_0259 | | +1.7 | 7.0 | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | compare |
| Shewana3_2896 | | +1.7 | 8.1 | thiamine biosynthesis protein ThiI (RefSeq) | compare |
| Shewana3_0505 | fre | +1.7 | 8.5 | FMN reductase (RefSeq) | compare |
| Shewana3_2384 | minE | +1.7 | 2.4 | cell division topological specificity factor MinE (RefSeq) | compare |
| Shewana3_2281 | | +1.7 | 5.0 | BadM/Rrf2 family transcriptional regulator (RefSeq) | compare |
| Shewana3_2466 | | +1.7 | 2.4 | anti-ECFsigma factor, ChrR (RefSeq) | compare |
| Shewana3_1691 | | +1.6 | 1.3 | LysR family transcriptional regulator (RefSeq) | compare |
| Shewana3_2394 | | +1.6 | 3.3 | 2OG-Fe(II) oxygenase (RefSeq) | compare |
| Shewana3_2122 | | +1.6 | 2.0 | glyceraldehyde-3-phosphate dehydrogenase (RefSeq) | compare |
| Shewana3_2480 | | +1.6 | 2.5 | LysR family transcriptional regulator (RefSeq) | compare |
| Shewana3_2400 | | +1.6 | 1.9 | hypothetical protein (RefSeq) | compare |
| Shewana3_1686 | | +1.6 | 1.3 | 1,4-dihydroxy-2-naphtoate prenyltransferase (RefSeq) | compare |
| Shewana3_2149 | | +1.6 | 1.0 | phosphogluconate dehydratase (RefSeq) | compare |
| Shewana3_3408 | panB | +1.6 | 7.5 | 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) | compare |
| Shewana3_2295 | | +1.6 | 2.1 | L-serine ammonia-lyase (RefSeq) | compare |
| Shewana3_0005 | trmE | +1.6 | 3.9 | tRNA modification GTPase TrmE (RefSeq) | compare |
| Shewana3_1775 | | +1.6 | 3.0 | YebG family protein (RefSeq) | compare |
| Shewana3_0820 | | +1.6 | 4.2 | SH3 type 3 domain-containing protein (RefSeq) | compare |
| Shewana3_1435 | tgt | +1.5 | 2.8 | queuine tRNA-ribosyltransferase (RefSeq) | compare |
| Shewana3_2990 | | +1.5 | 2.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_2292 | | +1.5 | 2.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_2519 | | +1.5 | 0.5 | biotin synthase (RefSeq) | compare |
| Shewana3_2175 | | +1.5 | 0.7 | phage integrase family protein (RefSeq) | compare |
| Shewana3_0235 | | +1.5 | 4.5 | periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) | compare |
| Shewana3_1894 | | +1.5 | 2.3 | surface antigen (D15) (RefSeq) | compare |
| Shewana3_2399 | | +1.5 | 3.0 | protein tyrosine phosphatase (RefSeq) | compare |
| Shewana3_1809 | | +1.5 | 3.2 | hypothetical protein (RefSeq) | compare |
| Shewana3_0154 | | +1.5 | 2.4 | general secretion pathway protein G (RefSeq) | compare |
| Shewana3_1934 | | +1.5 | 2.2 | hemolysin III family channel protein (RefSeq) | compare |
| Shewana3_0780 | | +1.4 | 5.7 | 2-dehydropantoate 2-reductase (RefSeq) | compare |
| Shewana3_2118 | | +1.4 | 2.0 | hypothetical protein (RefSeq) | compare |
| Shewana3_2448 | | +1.4 | 2.4 | hypothetical protein (RefSeq) | compare |
| Shewana3_2453 | | +1.4 | 1.1 | TraR/DksA family transcriptional regulator (RefSeq) | compare |
| Shewana3_2794 | | +1.4 | 1.2 | putative hydrolase (RefSeq) | compare |
| Shewana3_1996 | | +1.4 | 0.8 | phage integrase family protein (RefSeq) | compare |
| Shewana3_1368 | | +1.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| Shewana3_2541 | | +1.4 | 4.9 | alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) | compare |
| Shewana3_2544 | upp | +1.4 | 3.4 | uracil phosphoribosyltransferase (RefSeq) | compare |
| Shewana3_1823 | | +1.4 | 2.3 | hypothetical protein (RefSeq) | compare |
| Shewana3_1718 | | +1.4 | 1.0 | hypothetical protein (RefSeq) | compare |
| Shewana3_2405 | | +1.4 | 1.1 | alpha-L-glutamate ligase (RefSeq) | compare |
| Shewana3_3359 | | +1.4 | 1.4 | GGDEF domain-containing protein (RefSeq) | compare |
| Shewana3_2133 | | +1.4 | 1.2 | peptide methionine sulfoxide reductase (RefSeq) | compare |
| Shewana3_1938 | | +1.4 | 1.5 | UBA/THIF-type NAD/FAD binding protein (RefSeq) | compare |
| Shewana3_2594 | | +1.4 | 0.5 | putative two-component response-regulatory protein YehT (RefSeq) | compare |
| Shewana3_1450 | | +1.4 | 2.3 | membrane protein involved in aromatic hydrocarbon degradation (RefSeq) | compare |
| Shewana3_0603 | | +1.4 | 3.1 | cytochrome c1 (RefSeq) | compare |
| Shewana3_1956 | ruvA | +1.4 | 1.5 | Holliday junction DNA helicase RuvA (RefSeq) | compare |
| Shewana3_1903 | | +1.4 | 2.2 | restriction endonuclease (RefSeq) | compare |
| Shewana3_3493 | | +1.4 | 3.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_1648 | | +1.3 | 0.7 | arsenate reductase (RefSeq) | compare |
| Shewana3_1612 | | +1.3 | 1.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_1561 | | +1.3 | 3.9 | cysteine synthase (RefSeq) | compare |
| Shewana3_3382 | | +1.3 | 1.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_2460 | | +1.3 | 2.8 | hypothetical protein (RefSeq) | compare |
| Shewana3_2178 | | +1.3 | 1.2 | hypothetical protein (RefSeq) | compare |
| Shewana3_2898 | | +1.3 | 2.4 | flagellar motor protein PomA (RefSeq) | compare |
| Shewana3_2021 | | +1.3 | 3.4 | metal dependent phosphohydrolase (RefSeq) | compare |
| Shewana3_3146 | | +1.3 | 2.2 | OmpA/MotB domain-containing protein (RefSeq) | compare |
| Shewana3_1333 | | +1.3 | 4.6 | flagellin domain-containing protein (RefSeq) | compare |
| Shewana3_0158 | | +1.3 | 6.4 | general secretion pathway protein K (RefSeq) | compare |
| Shewana3_0717 | | +1.3 | 2.6 | putative hydroxylase (RefSeq) | compare |
| Shewana3_2566 | | +1.3 | 1.2 | ribosomal large subunit pseudouridine synthase C (RefSeq) | compare |
| Shewana3_1337 | fliS | +1.3 | 6.7 | flagellar protein FliS (RefSeq) | compare |
| Shewana3_1873 | | +1.3 | 1.7 | formate dehydrogenase family accessory protein FdhD (RefSeq) | compare |
| Shewana3_0656 | | +1.3 | 1.3 | two component LuxR family transcriptional regulator (RefSeq) | compare |
| Shewana3_2363 | | +1.3 | 3.1 | cytochrome c552 (RefSeq) | compare |
| Shewana3_2447 | | +1.3 | 2.7 | adenine phosphoribosyltransferase (RefSeq) | compare |
| Shewana3_1585 | cpdB | +1.3 | 3.4 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | compare |
| Shewana3_R0102 | | +1.3 | 3.0 | tRNA-Pro (RefSeq) | compare |
| Shewana3_1299 | | +1.3 | 2.3 | hypothetical protein (RefSeq) | compare |
| Shewana3_3576 | dipZ | +1.3 | 6.0 | thiol:disulfide interchange protein precursor (RefSeq) | compare |
| Shewana3_3815 | | +1.2 | 4.8 | CaCA family Na(+)/Ca(+) antiporter (RefSeq) | compare |
| Shewana3_2211 | | +1.2 | 0.9 | NERD domain-containing protein (RefSeq) | compare |
| Shewana3_2498 | | +1.2 | 3.3 | nicotinamide mononucleotide transporter PnuC (RefSeq) | compare |
| Shewana3_2737 | | +1.2 | 3.1 | putative esterase (RefSeq) | compare |
| Shewana3_2398 | | +1.2 | 0.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_2199 | | +1.2 | 1.1 | hypothetical protein (RefSeq) | compare |
| Shewana3_2181 | | +1.2 | 3.8 | hypothetical protein (RefSeq) | compare |
| Shewana3_0152 | | +1.2 | 6.7 | type II secretion system protein E (GspE) (RefSeq) | compare |
| Shewana3_1803 | | +1.2 | 1.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_3465 | | +1.2 | 5.5 | agmatine deiminase (RefSeq) | compare |
| Shewana3_2662 | tig | +1.2 | 3.8 | trigger factor (RefSeq) | compare |
| Shewana3_0232 | | +1.2 | 5.8 | cytochrome c, class I (RefSeq) | compare |
| Shewana3_2891 | | +1.2 | 1.8 | putative RNA 2'-O-ribose methyltransferase (RefSeq) | compare |
| Shewana3_0002 | | +1.2 | 2.8 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (RefSeq) | compare |
| Shewana3_2601 | | +1.2 | 2.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_0724 | | +1.2 | 3.1 | hypothetical protein (RefSeq) | compare |
| Shewana3_2283 | | +1.2 | 1.0 | RNA methyltransferase (RefSeq) | compare |
| Shewana3_0156 | | +1.2 | 1.6 | general secretion pathway protein I (RefSeq) | compare |
| Shewana3_1331 | flgL | +1.2 | 2.6 | flagellar hook-associated protein FlgL (RefSeq) | compare |
| Shewana3_1904 | | +1.2 | 0.6 | GCN5-related N-acetyltransferase (RefSeq) | compare |
| Shewana3_0014 | | +1.2 | 1.2 | transcriptional regulator (RefSeq) | compare |
| Shewana3_2352 | | +1.2 | 1.1 | hypothetical protein (RefSeq) | compare |
| Shewana3_2469 | | +1.2 | 1.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_0567 | | +1.2 | 2.6 | ABC-3 protein (RefSeq) | compare |
| Shewana3_1954 | | +1.2 | 0.9 | hypothetical protein (RefSeq) | compare |
| Shewana3_1755 | | +1.2 | 1.5 | arginyl-tRNA-protein transferase (RefSeq) | compare |
| Shewana3_0160 | | +1.2 | 4.4 | general secretion pathway M protein (RefSeq) | compare |
| Shewana3_4062 | | +1.2 | 2.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_1040 | | +1.2 | 2.0 | nucleoside-specific channel-forming protein, Tsx (RefSeq) | compare |
| Shewana3_2160 | | +1.2 | 0.8 | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) | compare |
| Shewana3_0591 | | +1.2 | 1.8 | hypothetical protein (RefSeq) | compare |
| Shewana3_1773 | | +1.2 | 0.7 | paraquat-inducible protein A (RefSeq) | compare |
| Shewana3_2455 | | +1.2 | 2.7 | phospholipase/carboxylesterase (RefSeq) | compare |
| Shewana3_0234 | | +1.2 | 5.3 | cytochrome c-type biogenesis protein CcmF (RefSeq) | compare |
| Shewana3_2019 | | +1.2 | 2.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_1807 | | +1.2 | 1.5 | hypothetical protein (RefSeq) | compare |
| Shewana3_3124 | | +1.2 | 2.3 | nitrogen regulatory protein P-II (RefSeq) | compare |
| Shewana3_2429 | | +1.2 | 2.1 | NADH:flavin oxidoreductase/NADH oxidase (RefSeq) | compare |
| Shewana3_R0122 | | +1.1 | 5.2 | tRNA-Leu (RefSeq) | compare |
| Shewana3_2167 | | +1.1 | 2.3 | diguanylate cyclase/phosphodiesterase (RefSeq) | compare |
| Shewana3_2720 | | +1.1 | 2.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_3030 | | +1.1 | 5.5 | sigma E regulatory protein, MucB/RseB (RefSeq) | compare |
| Shewana3_1236 | guaA | +1.1 | 3.7 | GMP synthase (RefSeq) | compare |
| Shewana3_1134 | | +1.1 | 2.3 | cytochrome B561 (RefSeq) | compare |
| Shewana3_1583 | | +1.1 | 2.0 | D,D-heptose 1,7-bisphosphate phosphatase (RefSeq) | compare |
| Shewana3_0149 | | +1.1 | 1.8 | RNA-binding S4 domain-containing protein (RefSeq) | compare |
| Shewana3_3224 | | +1.1 | 2.0 | lysine exporter protein LysE/YggA (RefSeq) | compare |
| Shewana3_2073 | | +1.1 | 1.2 | L-arabinose ABC transporter, substrate-binding component AraU (from data) | compare |
| Shewana3_3001 | | +1.1 | 1.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_4144 | | +1.1 | 2.1 | plastocyanin domain-containing protein (RefSeq) | compare |
| Shewana3_2147 | | +1.1 | 0.7 | deoxyguanosinetriphosphate triphosphohydrolase-like protein (RefSeq) | compare |
| Shewana3_3505 | | +1.1 | 5.7 | cell division protein ZapA (RefSeq) | compare |
| Shewana3_1770 | yebU | +1.1 | 0.6 | rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) | compare |
| Shewana3_1502 | | +1.1 | 1.1 | hypothetical protein (RefSeq) | compare |
| Shewana3_0399 | | +1.1 | 4.9 | nifR3 family TIM-barrel protein (RefSeq) | compare |
| Shewana3_0716 | | +1.1 | 6.4 | TonB-dependent siderophore receptor (RefSeq) | compare |
| Shewana3_3722 | | +1.1 | 1.9 | uroporphyrinogen decarboxylase (RefSeq) | compare |
| Shewana3_4211 | | +1.1 | 7.7 | hypothetical protein (RefSeq) | compare |
| Shewana3_1932 | | +1.1 | 1.0 | hypothetical protein (RefSeq) | compare |
| Shewana3_0159 | | +1.1 | 6.1 | general secretion pathway protein L (RefSeq) | compare |
| Shewana3_2114 | | +1.1 | 1.6 | hypothetical protein (RefSeq) | compare |
| Shewana3_1359 | fliA | +1.1 | 2.3 | flagellar biosynthesis sigma factor (RefSeq) | compare |
| Shewana3_1793 | | +1.1 | 1.9 | hypothetical protein (RefSeq) | compare |
| Shewana3_1794 | | +1.1 | 3.3 | hypothetical protein (RefSeq) | compare |
| Shewana3_1616 | | +1.1 | 3.2 | hypothetical protein (RefSeq) | compare |
| Shewana3_2915 | | +1.1 | 3.9 | phage integrase family protein (RefSeq) | compare |
| Shewana3_1192 | | +1.1 | 0.5 | protein of unknown function YGGT (RefSeq) | compare |
| Shewana3_1723 | | +1.1 | 1.1 | ATPase domain-containing protein (RefSeq) | compare |
| Shewana3_3249 | | +1.1 | 2.2 | UspA domain-containing protein (RefSeq) | compare |
| Shewana3_2202 | | +1.1 | 1.3 | XRE family transcriptional regulator (RefSeq) | compare |
| Shewana3_2029 | | +1.1 | 1.0 | hypothetical protein (RefSeq) | compare |
| Shewana3_2088 | | +1.1 | 1.4 | L-arabinolactonase (EC 3.1.1.15) (from data) | compare |
| Shewana3_2607 | | +1.1 | 1.3 | hypothetical protein (RefSeq) | compare |
| Shewana3_1487 | | +1.1 | 1.8 | porin (RefSeq) | compare |
| Shewana3_0161 | | +1.1 | 3.8 | type II secretion system protein N (RefSeq) | compare |