Experiment set2IT042 for Rhodospirillum rubrum S1H

Compare to:

carbon source anaerobic Succinic Acid 31.25 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Rru_A1018 -3.0 -9.0 extracellular solute-binding protein, family 1 (NCBI) compare
Rru_A1027 -2.9 -5.8 (Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (NCBI) compare
Rru_A0721 -2.6 -6.2 Anti-Sigm factor, ChrR (NCBI) compare
Rru_A0890 -2.5 -5.0 Integral membrane protein TerC (NCBI) compare
Rru_A2155 -2.4 -5.1 MotA/TolQ/ExbB proton channel (NCBI) compare
Rru_A1017 -2.3 -10.8 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) compare
Rru_A2722 -2.2 -8.0 2-oxoglutarate synthase, beta subunit (NCBI) compare
Rru_A1748 -2.1 -7.7 ABC transporter component (NCBI) compare
Rru_A1381 -2.0 -6.7 Short chain fatty acid transporter (NCBI) compare
Rru_A1302 -2.0 -5.4 Formiminoglutamate deiminase (NCBI) compare
Rru_A0960 -2.0 -6.1 AmpD (negative regulator of AmpC) (NCBI) compare
Rru_A2721 -1.9 -5.1 2-oxoglutarate synthase, alpha subunit (NCBI) compare
Rru_A3575 -1.9 -11.5 Acetate--CoA ligase (NCBI) compare
Rru_A1384 -1.9 -6.0 Multi-sensor Signal Transduction Histidine Kinase (NCBI) compare
Rru_A1613 -1.9 -8.3 Cystathionine beta-lyase (NCBI) compare
Rru_A1749 -1.8 -5.6 ABC transporter component (NCBI) compare
Rru_A0134 -1.6 -6.1 Succinic semialdehyde dehydrogenase (NCBI) compare
Rru_A2781 -1.6 -5.0 Protein of unknown function UPF0261 (NCBI) compare
Rru_A2231 -1.5 -5.4 Glycosyl transferase, family 25 (NCBI) compare
Rru_A2362 -1.5 -5.9 Protein-methionine-S-oxide reductase (NCBI) compare
Rru_A2858 -1.5 -6.3 Flagellin-like (NCBI) compare
Rru_A0280 -1.5 -5.6 Queuine tRNA-ribosyltransferase (NCBI) compare
Rru_A2984 -1.5 -5.3 CrtD protein (NCBI) compare
Rru_A1726 -1.5 -8.1 Transcription-repair coupling factor (NCBI) compare
Rru_A3000 -1.4 -6.4 Formate acetyltransferase (NCBI) compare
Rru_A2970 -1.3 -6.2 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (NCBI) compare
Rru_A0634 -1.2 -5.0 Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) compare
Rru_A1340 -1.0 -5.5 Glycerone kinase (NCBI) compare
Rru_A2191 +1.0 5.9 AMP-dependent synthetase and ligase (NCBI) compare
Rru_A2356 +1.4 8.4 extracellular solute-binding protein, family 5 (NCBI) compare
Rru_A2302 +1.4 6.1 Periplasmic binding protein/LacI transcriptional regulator (NCBI) compare
Rru_A1398 +1.4 6.8 Response regulator receiver domain protein (CheY) (NCBI) compare
Rru_A1401 +1.5 5.4 chemotaxis sensory transducer (NCBI) compare
Rru_A2767 +1.5 5.5 ribonuclease G (RNase G) (NCBI) compare
Rru_A2300 +1.6 6.6 inner-membrane translocator (NCBI) compare
Rru_A1313 +1.8 12.9 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) compare
Rru_A2213 +1.8 7.2 sulfotransferase (NCBI) compare
Rru_A1315 +1.8 6.2 Sterol-binding (NCBI) compare
Rru_A2297 +1.9 11.3 Ribokinase (NCBI) compare
Rru_A0246 +2.1 6.4 Ppx/GppA phosphatase (NCBI) compare
Rru_A3676 +2.1 8.8 TRAP dicarboxylate transporter, DctM subunit (NCBI) compare
Rru_A2789 +2.2 6.0 Major facilitator superfamily protein MFS_1 (NCBI) compare
Rru_A1809 +2.2 7.2 Sigma-24 (FecI) (NCBI) compare
Rru_A0679 +2.2 7.8 Transcriptional Regulator, TetR family (NCBI) compare
Rru_A3678 +2.7 11.2 TRAP dicarboxylate transporter- DctP subunit (NCBI) compare


Specific phenotypes for carbon source Succinic Acid across organisms