Experiment set2IT041 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most important genes:

  gene name fitness t score description  
MMJJ_RS06375 -5.1 -3.5 UbiX family flavin prenyltransferase compare
MMJJ_RS04485 -5.0 -10.1 riboflavin synthase compare
MMJJ_RS00570 -4.8 -2.9 ribonuclease P compare
MMJJ_RS04200 -4.8 -5.7 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS09375 -4.8 -2.8 hypothetical protein compare
MMJJ_RS07950 -4.7 -3.2 4Fe-4S binding protein compare
MMJJ_RS06860 -4.5 -5.0 hypothetical protein compare
MMJJ_RS00600 -4.4 -3.0 hydroxymethylbilane synthase compare
MMJJ_RS05535 -4.3 -15.8 hypothetical protein compare
MMJJ_RS08625 -4.3 -5.1 magnesium/cobalt transporter CorA compare
MMJJ_RS00450 -4.2 -2.9 DUF126 domain-containing protein compare
MMJJ_RS03760 -4.2 -2.9 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS04730 -4.2 -2.9 tyrosine decarboxylase MfnA compare
MMJJ_RS06625 -4.2 -2.9 pyruvate synthase subunit PorB compare
MMJJ_RS02045 -4.1 -3.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS07470 -4.0 -2.7 50S ribosome-binding GTPase compare
MMJJ_RS05995 -3.8 -2.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS06695 -3.8 -3.7 amidohydrolase compare
MMJJ_RS02200 -3.8 -11.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS04475 -3.6 -4.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06485 -3.6 -2.5 phosphoglycerate kinase compare
MMJJ_RS01935 -3.5 -4.7 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS07360 -3.5 -2.7 TIGR00269 family protein compare
MMJJ_RS00215 -3.5 -2.4 CCA tRNA nucleotidyltransferase compare
MMJJ_RS09095 -3.4 -11.3 MMPL family transporter compare
MMJJ_RS02275 -3.4 -5.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06270 -3.4 -9.7 dethiobiotin synthase compare
MMJJ_RS03580 -3.4 -3.3 TIGR00303 family protein compare
MMJJ_RS05650 -3.4 -3.3 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS03620 -3.3 -6.3 DUF2097 domain-containing protein compare
MMJJ_RS03615 -3.3 -3.2 cobalt-precorrin-8 methylmutase compare
MMJJ_RS08320 -3.3 -2.2 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS08340 -3.3 -5.4 archaeoflavoprotein AfpA compare
MMJJ_RS05590 -3.2 -3.0 homoserine dehydrogenase compare
MMJJ_RS03170 -3.2 -9.4 DUF5612 domain-containing protein compare
MMJJ_RS03230 -3.2 -5.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS07350 -3.2 -4.3 4Fe-4S binding protein compare
MMJJ_RS01360 -3.2 -2.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS03965 -3.2 -3.2 DNA-directed RNA polymerase subunit L compare
MMJJ_RS07415 -3.2 -3.0 polyprenyl diphosphate synthase compare
MMJJ_RS05445 -3.1 -2.7 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS00645 -3.1 -12.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS06840 -3.1 -3.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS07380 -3.1 -9.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04685 -3.1 -10.0 carbamoyltransferase HypF compare
MMJJ_RS01750 -3.1 -3.3 ferrous iron transport protein A compare
MMJJ_RS05490 -3.1 -3.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS01350 -3.0 -7.0 sodium:proton antiporter compare
MMJJ_RS03670 -3.0 -4.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS02090 -3.0 -5.6 tyramine--L-glutamate ligase compare
MMJJ_RS09175 -2.9 -1.4 anthranilate synthase component I compare
MMJJ_RS03840 -2.9 -3.9 DHH family phosphoesterase compare
MMJJ_RS03055 -2.9 -4.1 hypothetical protein compare
MMJJ_RS05260 -2.9 -5.1 ATP-grasp domain-containing protein compare
MMJJ_RS05620 -2.9 -4.3 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS00270 -2.9 -3.3 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS06180 -2.9 -3.4 tryptophan--tRNA ligase compare
MMJJ_RS06250 -2.9 -2.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS08020 -2.9 -9.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04800 -2.8 -6.9 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08850 -2.8 -3.3 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS06510 -2.8 -3.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS06910 -2.8 -4.2 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01600 -2.8 -3.3 radical SAM protein compare
MMJJ_RS08660 -2.8 -3.8 acetylornithine transaminase compare
MMJJ_RS04995 -2.8 -6.1 Tfx family DNA-binding protein compare
MMJJ_RS00425 -2.8 -2.8 hypothetical protein compare
MMJJ_RS00210 -2.8 -2.6 DUF530 family protein compare
MMJJ_RS07980 -2.8 -11.5 biotin synthase BioB compare
MMJJ_RS06905 -2.7 -2.9 hypothetical protein compare
MMJJ_RS03005 -2.7 -4.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08080 -2.7 -11.2 TIGR00300 family protein compare
MMJJ_RS06260 -2.7 -7.5 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS07245 -2.7 -5.9 amidohydrolase family protein compare
MMJJ_RS00125 -2.7 -3.1 KEOPS complex subunit Cgi121 compare
MMJJ_RS03200 -2.7 -2.7 uroporphyrinogen-III synthase compare
MMJJ_RS05380 -2.7 -1.8 hypothetical protein compare
MMJJ_RS08250 -2.7 -6.1 hydrogenase maturation peptidase HycI compare
MMJJ_RS07455 -2.7 -6.8 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07000 -2.7 -2.4 TrkH family potassium uptake protein compare
MMJJ_RS05720 -2.7 -3.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05810 -2.7 -5.8 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04975 -2.7 -2.7 glycosyltransferase family 4 protein compare
MMJJ_RS06805 -2.6 -3.1 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS03270 -2.6 -2.6 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05610 -2.6 -4.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS04145 -2.6 -9.2 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS03110 -2.6 -4.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06255 -2.6 -6.8 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS01755 -2.6 -3.0 ferrous iron transport protein B compare
MMJJ_RS04155 -2.6 -7.1 hypothetical protein compare
MMJJ_RS06750 -2.6 -3.3 homoaconitase large subunit compare
MMJJ_RS06040 -2.6 -4.2 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08035 -2.6 -8.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS04790 -2.5 -3.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS00205 -2.5 -5.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS04980 -2.5 -4.9 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS03820 -2.5 -3.3 hydrogenase formation protein HypD compare
MMJJ_RS03895 -2.5 -3.2 hydrogenase expression/formation protein HypE compare
MMJJ_RS05950 -2.5 -3.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS07170 -2.5 -4.7 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS05415 -2.5 -2.8 hypothetical protein compare
MMJJ_RS07705 -2.4 -3.2 GTP-binding protein EngB compare
MMJJ_RS02920 -2.4 -2.8 30S ribosomal protein S27ae compare
MMJJ_RS06240 -2.4 -2.9 dihydropteroate synthase-like protein compare
MMJJ_RS06225 -2.4 -2.6 adenosylmethionine decarboxylase compare
MMJJ_RS04520 -2.4 -5.6 coenzyme F430 synthase compare
MMJJ_RS08795 -2.4 -2.8 phosphoglucosamine mutase compare
MMJJ_RS06930 -2.4 -3.2 type II methionyl aminopeptidase compare
MMJJ_RS08055 -2.4 -6.0 methanogenesis marker 14 protein compare
MMJJ_RS01200 -2.4 -3.1 PRC-barrel domain-containing protein compare
MMJJ_RS07190 -2.4 -3.8 RtcB family protein compare
MMJJ_RS07425 -2.3 -9.7 MBL fold metallo-hydrolase compare
MMJJ_RS06265 -2.3 -12.2 8-amino-7-oxononanoate synthase compare
MMJJ_RS04595 -2.3 -6.0 hypothetical protein compare
MMJJ_RS06155 -2.3 -5.6 phosphatidylglycerophosphatase A compare
MMJJ_RS09190 -2.3 -2.1 tryptophan synthase subunit beta compare
MMJJ_RS06600 -2.3 -3.6 DUF555 domain-containing protein compare
MMJJ_RS08535 -2.3 -3.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS04700 -2.3 -7.1 deoxyhypusine synthase compare
MMJJ_RS05330 -2.3 -2.6 DNA polymerase II large subunit compare
MMJJ_RS07945 -2.3 -3.3 4Fe-4S binding protein compare
MMJJ_RS00275 -2.3 -2.7 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03150 -2.2 -6.5 2-phospho-L-lactate transferase compare
MMJJ_RS01880 -2.2 -3.4 RlmE family RNA methyltransferase compare
MMJJ_RS08095 -2.2 -4.2 cobyric acid synthase CobQ compare
MMJJ_RS00560 -2.2 -4.0 homoisocitrate dehydrogenase compare
MMJJ_RS08330 -2.2 -3.3 SufD family Fe-S cluster assembly protein compare
MMJJ_RS02040 -2.2 -2.8 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS03125 -2.2 -4.5 GMC oxidoreductase compare
MMJJ_RS03060 -2.2 -2.8 methanogenesis marker 7 protein compare
MMJJ_RS03115 -2.2 -8.5 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS07410 -2.2 -4.2 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS08840 -2.2 -4.4 calcium/sodium antiporter compare
MMJJ_RS03865 -2.2 -1.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS04655 -2.2 -5.2 FAD-dependent oxidoreductase compare
MMJJ_RS04670 -2.2 -3.6 DUF2117 domain-containing protein compare
MMJJ_RS08010 -2.2 -7.0 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS00355 -2.1 -2.8 ribonuclease P protein component 4 compare
MMJJ_RS07785 -2.1 -2.5 fumarate reductase subunit A compare
MMJJ_RS06390 -2.1 -2.2 NADPH-dependent F420 reductase compare
MMJJ_RS07725 -2.1 -5.5 DNA primase DnaG compare
MMJJ_RS09100 -2.1 -9.8 COG1361 S-layer family protein compare
MMJJ_RS04650 -2.1 -5.7 nitrogenase iron protein compare
MMJJ_RS06490 -2.1 -3.0 methanogenesis marker 2 protein compare
MMJJ_RS04675 -2.1 -6.8 thiamine pyrophosphate-binding protein compare
MMJJ_RS01415 -2.1 -2.7 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS03815 -2.1 -2.4 nascent polypeptide-associated complex protein compare
MMJJ_RS06030 -2.1 -6.2 4Fe-4S binding protein compare
MMJJ_RS01870 -2.1 -2.6 methanogenesis marker 15 protein compare
MMJJ_RS07630 -2.1 -10.0 hypothetical protein compare
MMJJ_RS06940 -2.1 -8.8 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS06725 -2.0 -11.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS05935 -2.0 -2.3 Era-like GTP-binding protein compare
MMJJ_RS03785 -2.0 -2.7 hypothetical protein compare
MMJJ_RS03225 -2.0 -3.2 4Fe-4S binding protein compare
MMJJ_RS05710 -2.0 -4.6 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS06175 -2.0 -1.9 DUF1743 domain-containing protein compare
MMJJ_RS05655 -1.9 -6.5 HisA/HisF family protein compare
MMJJ_RS05295 -1.9 -8.8 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS02035 -1.9 -6.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMJJ_RS06760 -1.9 -4.3 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS01960 -1.9 -5.2 glycosyltransferase family 2 protein compare
MMJJ_RS07430 -1.9 -4.5 ribonuclease VapC compare
MMJJ_RS04970 -1.9 -1.6 DUF655 domain-containing protein compare
MMJJ_RS06185 -1.9 -4.5 cobalamin biosynthesis protein compare
MMJJ_RS04150 -1.8 -2.9 DUF5379 domain-containing protein compare
MMJJ_RS03095 -1.8 -2.6 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS09135 -1.8 -7.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS06715 -1.8 -8.7 lactaldehyde dehydrogenase compare
MMJJ_RS06835 -1.8 -10.1 4Fe-4S binding protein compare
MMJJ_RS08155 -1.8 -4.4 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS08620 -1.8 -2.9 DUF373 family protein compare
MMJJ_RS01345 -1.8 -4.3 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS03650 -1.8 -5.3 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS06705 -1.8 -4.1 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03920 -1.7 -11.7 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS08925 -1.7 -9.3 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03155 -1.7 -8.9 hypothetical protein compare
MMJJ_RS07375 -1.7 -7.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS03845 -1.7 -3.2 translation initiation factor IF-2 compare
MMJJ_RS05770 -1.7 -2.4 flagellar protein D compare
MMJJ_RS05575 -1.7 -3.2 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04505 -1.7 -5.8 CDC48 family AAA ATPase compare
MMJJ_RS00195 -1.7 -3.6 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS01690 -1.7 -2.7 methanogenesis marker 12 protein compare
MMJJ_RS08870 -1.7 -1.6 2-isopropylmalate synthase compare
MMJJ_RS06000 -1.7 -4.3 cation:proton antiporter subunit C compare
MMJJ_RS07345 -1.7 -5.5 homocysteine biosynthesis protein compare
MMJJ_RS05540 -1.6 -11.5 LysR family transcriptional regulator compare
MMJJ_RS07155 -1.6 -7.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS04985 -1.6 -2.3 glutamyl-tRNA reductase compare
MMJJ_RS06875 -1.6 -2.2 hypothetical protein compare
MMJJ_RS07015 -1.6 -1.4 PFL family protein compare
MMJJ_RS01830 -1.6 -2.7 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS05375 -1.6 -9.6 radical SAM protein compare
MMJJ_RS04680 -1.6 -7.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS03995 -1.6 -4.2 PHP domain-containing protein compare
MMJJ_RS00285 -1.6 -10.1 UPF0254 family protein compare
MMJJ_RS07160 -1.6 -12.0 M20 family metallo-hydrolase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms