Experiment set2IT041 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +0.7 2.1 hypothetical protein compare
MMJJ_RS04720 +0.7 1.0 IMP dehydrogenase compare
MMJJ_RS05870 +0.7 2.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS04375 +0.6 1.6 hypothetical protein compare
MMJJ_RS06130 +0.5 2.7 hypothetical protein compare
MMJJ_RS06975 +0.5 2.5 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS05225 +0.5 0.6 Gar1/Naf1 family protein compare
MMJJ_RS07210 +0.5 3.5 AmmeMemoRadiSam system protein B compare
MMJJ_RS09380 +0.4 1.3 hypothetical protein compare
MMJJ_RS00525 +0.4 1.3 Dabb family protein compare
MMJJ_RS06640 +0.4 3.2 YfcE family phosphodiesterase compare
MMJJ_RS04480 +0.4 1.6 hypothetical protein compare
MMJJ_RS01010 +0.4 4.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS06465 +0.4 2.4 hypothetical protein compare
MMJJ_RS06495 +0.4 1.6 hypothetical protein compare
MMJJ_RS06585 +0.4 2.4 alanine racemase compare
MMJJ_RS09370 +0.4 1.4 heavy-metal-associated domain-containing protein compare
MMJJ_RS03410 +0.4 1.6 hypothetical protein compare
MMJJ_RS06710 +0.4 3.1 TldD/PmbA family protein compare
MMJJ_RS06720 +0.4 2.8 mechanosensitive ion channel family protein compare
MMJJ_RS09255 +0.4 1.5 hypothetical protein compare
MMJJ_RS05970 +0.4 1.0 MJ0307 family thioredoxin compare
MMJJ_RS06460 +0.4 2.6 cytochrome c compare
MMJJ_RS09325 +0.4 2.5 hypothetical protein compare
MMJJ_RS06470 +0.3 2.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS08365 +0.3 1.8 DsrE family protein compare
MMJJ_RS09300 +0.3 1.1 hypothetical protein compare
MMJJ_RS06445 +0.3 3.0 hypothetical protein compare
MMJJ_RS06055 +0.3 2.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS07825 +0.3 1.9 YciI family protein compare
MMJJ_RS08370 +0.3 1.8 hypothetical protein compare
MMJJ_RS06550 +0.3 2.6 ABC transporter permease compare
MMJJ_RS06810 +0.3 2.6 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06960 +0.3 2.8 CAP domain-containing protein compare
MMJJ_RS08935 +0.3 0.6 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS06680 +0.3 2.1 DUF366 family protein compare
MMJJ_RS07765 +0.3 1.4 DMT family protein compare
MMJJ_RS01210 +0.3 1.0 hypothetical protein compare
MMJJ_RS03850 +0.3 1.5 nucleoside-diphosphate kinase compare
MMJJ_RS06455 +0.3 2.3 YeeE/YedE family protein compare
MMJJ_RS09205 +0.3 1.6 hypothetical protein compare
MMJJ_RS05980 +0.3 2.3 DUF5400 domain-containing protein compare
MMJJ_RS09265 +0.3 1.2 hypothetical protein compare
MMJJ_RS06770 +0.3 2.5 hypothetical protein compare
MMJJ_RS08515 +0.3 1.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06190 +0.3 2.4 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06105 +0.3 2.2 DUF99 family protein compare
MMJJ_RS04215 +0.3 2.5 DMT family transporter compare
MMJJ_RS09355 +0.3 1.6 hypothetical protein compare
MMJJ_RS01590 +0.3 0.7 adenine phosphoribosyltransferase compare
MMJJ_RS07420 +0.3 2.1 protease complex subunit PrcB family protein compare
MMJJ_RS01060 +0.3 1.5 ABC transporter ATP-binding protein compare
MMJJ_RS03835 +0.3 1.2 DUF504 domain-containing protein compare
MMJJ_RS06765 +0.3 2.3 hypothetical protein compare
MMJJ_RS01530 +0.3 1.0 YwbE family protein compare
MMJJ_RS07185 +0.3 1.1 DUF371 domain-containing protein compare
MMJJ_RS06205 +0.3 2.0 EamA family transporter compare
MMJJ_RS06450 +0.3 2.0 DUF3343 domain-containing protein compare
MMJJ_RS05035 +0.3 1.7 4Fe-4S binding protein compare
MMJJ_RS06675 +0.3 2.1 TIGR01212 family radical SAM protein compare
MMJJ_RS03690 +0.3 1.8 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS04585 +0.3 1.8 phenylacetate--CoA ligase compare
MMJJ_RS07935 +0.3 0.4 protein fwdD compare
MMJJ_RS06555 +0.3 2.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS06580 +0.3 2.0 alanine dehydrogenase compare
MMJJ_RS06275 +0.3 1.2 hypothetical protein compare
MMJJ_RS05585 +0.3 2.0 hypothetical protein compare
MMJJ_RS07830 +0.3 1.8 DUF1786 domain-containing protein compare
MMJJ_RS06160 +0.2 1.9 stage II sporulation protein M compare
MMJJ_RS07610 +0.2 1.7 DUF2119 domain-containing protein compare
MMJJ_RS00540 +0.2 1.5 hypothetical protein compare
MMJJ_RS07260 +0.2 1.7 PspC domain-containing protein compare
MMJJ_RS07215 +0.2 2.0 TIGR00341 family protein compare
MMJJ_RS08720 +0.2 1.9 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS06135 +0.2 1.8 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS07255 +0.2 2.2 hypothetical protein compare
MMJJ_RS01785 +0.2 0.4 50S ribosomal protein L14e compare
MMJJ_RS08775 +0.2 1.7 PfkB family carbohydrate kinase compare
MMJJ_RS06280 +0.2 1.9 hypothetical protein compare
MMJJ_RS08580 +0.2 1.5 YkgJ family cysteine cluster protein compare
MMJJ_RS01770 +0.2 1.2 TOBE domain-containing protein compare
MMJJ_RS07030 +0.2 2.0 hypothetical protein compare
MMJJ_RS06685 +0.2 2.1 S-layer protein compare
MMJJ_RS03345 +0.2 1.3 hypothetical protein compare
MMJJ_RS08350 +0.2 2.2 heavy metal translocating P-type ATPase compare
MMJJ_RS07650 +0.2 2.0 formate/nitrite transporter family protein compare
MMJJ_RS04175 +0.2 1.3 hypothetical protein compare
MMJJ_RS07500 +0.2 1.8 hypothetical protein compare
MMJJ_RS06515 +0.2 1.7 ribonuclease III compare
MMJJ_RS03360 +0.2 0.4 hypothetical protein compare
MMJJ_RS08730 +0.2 1.7 glycosyltransferase family 4 protein compare
MMJJ_RS06800 +0.2 1.3 prefoldin subunit alpha compare
MMJJ_RS06440 +0.2 1.6 DUF4870 domain-containing protein compare
MMJJ_RS06500 +0.2 1.4 class I SAM-dependent methyltransferase compare
MMJJ_RS07660 +0.2 1.5 carbonic anhydrase compare
MMJJ_RS07205 +0.2 0.8 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS03425 +0.2 0.9 DUF2080 family transposase-associated protein compare
MMJJ_RS06235 +0.2 1.8 IGHMBP2 family helicase compare
MMJJ_RS02285 +0.2 0.9 class III signal peptide-containing protein compare
MMJJ_RS04180 +0.2 0.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07240 +0.2 1.8 MBL fold metallo-hydrolase compare
MMJJ_RS05115 +0.2 1.0 P-II family nitrogen regulator compare
MMJJ_RS03355 +0.2 1.6 hypothetical protein compare
MMJJ_RS06430 +0.2 1.3 haloacid dehalogenase compare
MMJJ_RS04945 +0.2 1.6 PLP-dependent aminotransferase family protein compare
MMJJ_RS07445 +0.2 1.4 RlmF-related methyltransferase compare
MMJJ_RS05890 +0.2 1.8 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS06120 +0.2 1.4 DUF4013 domain-containing protein compare
MMJJ_RS07010 +0.2 1.1 preprotein translocase subunit Sec61beta compare
MMJJ_RS00420 +0.2 1.2 CBS domain-containing protein compare
MMJJ_RS04365 +0.2 1.0 helix-turn-helix transcriptional regulator compare
MMJJ_RS07495 +0.2 1.3 4Fe-4S binding protein compare
MMJJ_RS07270 +0.2 1.3 ribonuclease HII compare
MMJJ_RS07665 +0.2 1.8 formate dehydrogenase subunit alpha compare
MMJJ_RS09390 +0.2 1.0 hypothetical protein compare
MMJJ_RS05235 +0.2 1.7 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS02880 +0.2 1.4 hypothetical protein compare
MMJJ_RS08040 +0.2 1.5 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08375 +0.2 1.5 ferritin compare
MMJJ_RS08075 +0.2 1.5 ATP-dependent DNA helicase compare
MMJJ_RS08360 +0.2 1.5 FprA family A-type flavoprotein compare
MMJJ_RS03185 +0.2 0.4 alanine--tRNA ligase compare
MMJJ_RS01125 +0.2 1.1 hypothetical protein compare
MMJJ_RS00070 +0.2 0.7 CooT family nickel-binding protein compare
MMJJ_RS08310 +0.2 1.1 ZIP family metal transporter compare
MMJJ_RS01735 +0.2 1.2 rubrerythrin family protein compare
MMJJ_RS05195 +0.2 0.5 hypothetical protein compare
MMJJ_RS07450 +0.2 1.1 hypothetical protein compare
MMJJ_RS08175 +0.2 1.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08780 +0.2 0.9 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS02000 +0.2 0.7 AzlD domain-containing protein compare
MMJJ_RS07890 +0.2 1.2 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS03045 +0.2 1.3 hypothetical protein compare
MMJJ_RS06790 +0.2 1.5 nucleotidyltransferase family protein compare
MMJJ_RS04245 +0.2 1.1 flavoprotein compare
MMJJ_RS05985 +0.2 1.2 ABC transporter substrate-binding protein compare
MMJJ_RS06115 +0.2 1.3 pyruvate kinase compare
MMJJ_RS08025 +0.2 0.6 hypothetical protein compare
MMJJ_RS05530 +0.2 0.6 roadblock/LC7 domain-containing protein compare
MMJJ_RS03515 +0.2 0.9 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS07970 +0.2 0.2 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS07855 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS00460 +0.2 1.0 selenouridine synthase SelU-like subunit compare
MMJJ_RS03510 +0.2 1.2 acyl-CoA dehydratase activase compare
MMJJ_RS04925 +0.2 1.3 cation:proton antiporter compare
MMJJ_RS06590 +0.2 1.3 sodium:alanine symporter family protein compare
MMJJ_RS04220 +0.2 1.1 helix-turn-helix transcriptional regulator compare
MMJJ_RS05335 +0.2 1.1 heavy metal-binding domain-containing protein compare
MMJJ_RS01740 +0.2 1.3 ATP-binding protein compare
MMJJ_RS06045 +0.2 1.2 hypothetical protein compare
MMJJ_RS03915 +0.2 1.0 hypothetical protein compare
MMJJ_RS07385 +0.2 1.2 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05940 +0.2 1.2 HAD family hydrolase compare
MMJJ_RS09405 +0.2 0.4 hypothetical protein compare
MMJJ_RS05900 +0.2 1.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS05520 +0.2 1.3 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS07835 +0.2 1.0 UPF0489 family protein compare
MMJJ_RS07905 +0.2 1.1 DUF89 domain-containing protein compare
MMJJ_RS09010 +0.2 0.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS08715 +0.2 0.9 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS04270 +0.2 0.7 DUF364 domain-containing protein compare
MMJJ_RS00295 +0.1 1.0 response regulator compare
MMJJ_RS07670 +0.1 1.3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS06950 +0.1 1.1 4-demethylwyosine synthase TYW1 compare
MMJJ_RS08015 +0.1 1.0 HAD family hydrolase compare
MMJJ_RS03590 +0.1 0.7 restriction endonuclease compare
MMJJ_RS02265 +0.1 1.1 hypothetical protein compare
MMJJ_RS08385 +0.1 1.0 class II SORL domain-containing protein compare
MMJJ_RS08705 +0.1 1.0 AEC family transporter compare
MMJJ_RS03725 +0.1 0.3 sulfurtransferase TusA family protein compare
MMJJ_RS07795 +0.1 0.7 cupin domain-containing protein compare
MMJJ_RS01275 +0.1 0.5 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS08255 +0.1 1.1 GNAT family N-acetyltransferase compare
MMJJ_RS04115 +0.1 1.0 HDIG domain-containing protein compare
MMJJ_RS02125 +0.1 0.4 hypothetical protein compare
MMJJ_RS09005 +0.1 1.3 N-6 DNA methylase compare
MMJJ_RS08295 +0.1 1.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS06340 +0.1 0.4 coenzyme-B sulfoethylthiotransferase subunit alpha compare
MMJJ_RS05095 +0.1 1.3 ammonium transporter compare
MMJJ_RS09200 +0.1 1.1 Nre family DNA repair protein compare
MMJJ_RS06520 +0.1 1.0 TldD/PmbA family protein compare
MMJJ_RS06080 +0.1 1.1 serine/threonine protein kinase compare
MMJJ_RS01030 +0.1 1.2 hypothetical protein compare
MMJJ_RS04055 +0.1 0.5 hypothetical protein compare
MMJJ_RS05495 +0.1 1.0 MinD/ParA family protein compare
MMJJ_RS07480 +0.1 1.0 FAD-dependent oxidoreductase compare
MMJJ_RS05245 +0.1 1.0 type II secretion system F family protein compare
MMJJ_RS03015 +0.1 1.0 Ig-like domain-containing protein compare
MMJJ_RS04295 +0.1 1.1 DUF2202 domain-containing protein compare
MMJJ_RS08395 +0.1 1.1 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS07365 +0.1 1.1 CatB-related O-acetyltransferase compare
MMJJ_RS08045 +0.1 1.1 transporter substrate-binding domain-containing protein compare
MMJJ_RS01320 +0.1 0.9 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS04860 +0.1 1.1 hypothetical protein compare
MMJJ_RS02080 +0.1 1.0 AMP-binding protein compare
MMJJ_RS05975 +0.1 0.7 sulfurtransferase TusA family protein compare
MMJJ_RS05925 +0.1 0.9 DUF2099 family protein compare
MMJJ_RS05690 +0.1 1.1 hypothetical protein compare
MMJJ_RS04065 +0.1 0.9 hypothetical protein compare
MMJJ_RS07040 +0.1 0.1 preprotein translocase subunit SecY compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms