Experiment set2IT039 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.5 4.7 hypothetical protein compare
MMJJ_RS04720 +1.0 2.3 IMP dehydrogenase compare
MMJJ_RS09295 +0.9 1.5 hypothetical protein compare
MMJJ_RS08730 +0.8 6.7 glycosyltransferase family 4 protein compare
MMJJ_RS03205 +0.6 4.3 metallophosphoesterase compare
MMJJ_RS08830 +0.6 3.3 hypothetical protein compare
MMJJ_RS01010 +0.6 6.1 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS03360 +0.6 1.4 hypothetical protein compare
MMJJ_RS00480 +0.6 4.7 flippase compare
MMJJ_RS09380 +0.5 2.0 hypothetical protein compare
MMJJ_RS06755 +0.5 4.4 diadenylate cyclase compare
MMJJ_RS07035 +0.5 0.7 glycosyl transferase compare
MMJJ_RS08725 +0.5 3.8 flippase compare
MMJJ_RS09370 +0.5 1.6 heavy-metal-associated domain-containing protein compare
MMJJ_RS09265 +0.5 1.6 hypothetical protein compare
MMJJ_RS00415 +0.5 2.9 DedA family protein compare
MMJJ_RS09390 +0.4 1.6 hypothetical protein compare
MMJJ_RS02905 +0.4 1.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS08040 +0.4 2.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06975 +0.4 1.8 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08370 +0.4 2.3 hypothetical protein compare
MMJJ_RS08720 +0.4 3.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS01060 +0.4 2.3 ABC transporter ATP-binding protein compare
MMJJ_RS08515 +0.4 1.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS06950 +0.3 2.6 4-demethylwyosine synthase TYW1 compare
MMJJ_RS05915 +0.3 1.6 multiprotein bridging factor aMBF1 compare
MMJJ_RS06210 +0.3 1.9 hypothetical protein compare
MMJJ_RS00420 +0.3 2.2 CBS domain-containing protein compare
MMJJ_RS07935 +0.3 0.8 protein fwdD compare
MMJJ_RS01825 +0.3 1.8 DNA repair and recombination protein RadB compare
MMJJ_RS03370 +0.3 1.4 hypothetical protein compare
MMJJ_RS04935 +0.3 1.8 4Fe-4S binding protein compare
MMJJ_RS06680 +0.3 2.2 DUF366 family protein compare
MMJJ_RS03410 +0.3 1.1 hypothetical protein compare
MMJJ_RS01125 +0.3 2.1 hypothetical protein compare
MMJJ_RS04375 +0.3 1.3 hypothetical protein compare
MMJJ_RS06540 +0.3 1.1 DUF2120 domain-containing protein compare
MMJJ_RS07420 +0.3 2.3 protease complex subunit PrcB family protein compare
MMJJ_RS07690 +0.3 2.1 glycosyltransferase family 4 protein compare
MMJJ_RS04055 +0.3 1.7 hypothetical protein compare
MMJJ_RS04215 +0.3 2.5 DMT family transporter compare
MMJJ_RS03690 +0.3 1.6 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS05980 +0.3 1.7 DUF5400 domain-containing protein compare
MMJJ_RS06550 +0.3 2.3 ABC transporter permease compare
MMJJ_RS08580 +0.3 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS06105 +0.3 2.1 DUF99 family protein compare
MMJJ_RS05190 +0.3 1.7 gamma carbonic anhydrase family protein compare
MMJJ_RS04785 +0.3 1.7 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS04585 +0.3 1.7 phenylacetate--CoA ligase compare
MMJJ_RS08750 +0.3 2.1 glycosyltransferase compare
MMJJ_RS06190 +0.3 2.2 7-cyano-7-deazaguanine synthase compare
MMJJ_RS05510 +0.2 1.8 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS06720 +0.2 2.0 mechanosensitive ion channel family protein compare
MMJJ_RS05505 +0.2 2.4 hypothetical protein compare
MMJJ_RS09010 +0.2 1.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMJJ_RS06770 +0.2 2.1 hypothetical protein compare
MMJJ_RS06455 +0.2 2.0 YeeE/YedE family protein compare
MMJJ_RS08705 +0.2 1.9 AEC family transporter compare
MMJJ_RS07610 +0.2 1.8 DUF2119 domain-containing protein compare
MMJJ_RS06275 +0.2 1.7 hypothetical protein compare
MMJJ_RS07210 +0.2 1.9 AmmeMemoRadiSam system protein B compare
MMJJ_RS07660 +0.2 1.6 carbonic anhydrase compare
MMJJ_RS01210 +0.2 0.8 hypothetical protein compare
MMJJ_RS06505 +0.2 1.1 prephenate dehydratase compare
MMJJ_RS06130 +0.2 1.3 hypothetical protein compare
MMJJ_RS06205 +0.2 1.7 EamA family transporter compare
MMJJ_RS05250 +0.2 1.7 HDIG domain-containing protein compare
MMJJ_RS07740 +0.2 1.6 DUF2334 domain-containing protein compare
MMJJ_RS07450 +0.2 1.3 hypothetical protein compare
MMJJ_RS00175 +0.2 1.5 cytochrome c biogenesis CcdA family protein compare
MMJJ_RS05695 +0.2 1.5 class III signal peptide-containing protein compare
MMJJ_RS06430 +0.2 1.6 haloacid dehalogenase compare
MMJJ_RS06120 +0.2 1.5 DUF4013 domain-containing protein compare
MMJJ_RS07255 +0.2 2.0 hypothetical protein compare
MMJJ_RS07795 +0.2 1.4 cupin domain-containing protein compare
MMJJ_RS06740 +0.2 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS06135 +0.2 1.6 50S ribosomal protein L11 methyltransferase compare
MMJJ_RS06460 +0.2 1.6 cytochrome c compare
MMJJ_RS06445 +0.2 1.8 hypothetical protein compare
MMJJ_RS09325 +0.2 1.2 hypothetical protein compare
MMJJ_RS03850 +0.2 1.1 nucleoside-diphosphate kinase compare
MMJJ_RS09065 +0.2 1.3 hypothetical protein compare
MMJJ_RS08760 +0.2 1.5 glycosyltransferase family 9 protein compare
MMJJ_RS07280 +0.2 1.4 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07480 +0.2 1.6 FAD-dependent oxidoreductase compare
MMJJ_RS05815 +0.2 1.1 hypothetical protein compare
MMJJ_RS04245 +0.2 1.3 flavoprotein compare
MMJJ_RS05335 +0.2 1.0 heavy metal-binding domain-containing protein compare
MMJJ_RS06440 +0.2 1.4 DUF4870 domain-containing protein compare
MMJJ_RS03185 +0.2 0.5 alanine--tRNA ligase compare
MMJJ_RS06470 +0.2 1.4 tripartite tricarboxylate transporter permease compare
MMJJ_RS07010 +0.2 1.2 preprotein translocase subunit Sec61beta compare
MMJJ_RS03605 +0.2 1.1 TIGR00297 family protein compare
MMJJ_RS04065 +0.2 1.3 hypothetical protein compare
MMJJ_RS07665 +0.2 1.7 formate dehydrogenase subunit alpha compare
MMJJ_RS00140 +0.2 1.2 hypothetical protein compare
MMJJ_RS02245 +0.2 1.2 DUF432 domain-containing protein compare
MMJJ_RS07270 +0.2 1.2 ribonuclease HII compare
MMJJ_RS06810 +0.2 1.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS07500 +0.2 1.4 hypothetical protein compare
MMJJ_RS08930 +0.2 1.3 5'/3'-nucleotidase SurE compare
MMJJ_RS05030 +0.2 1.4 orotate phosphoribosyltransferase-like protein compare
MMJJ_RS03510 +0.2 1.2 acyl-CoA dehydratase activase compare
MMJJ_RS04480 +0.2 0.5 hypothetical protein compare
MMJJ_RS05365 +0.2 1.0 DUF2798 domain-containing protein compare
MMJJ_RS07650 +0.2 1.5 formate/nitrite transporter family protein compare
MMJJ_RS08365 +0.2 0.8 DsrE family protein compare
MMJJ_RS05760 +0.2 1.5 flagellar protein F compare
MMJJ_RS07215 +0.2 1.5 TIGR00341 family protein compare
MMJJ_RS03380 +0.2 1.0 hypothetical protein compare
MMJJ_RS02965 +0.2 0.9 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS05405 +0.2 1.4 DNA cytosine methyltransferase compare
MMJJ_RS09155 +0.2 1.4 RluA family pseudouridine synthase compare
MMJJ_RS07860 +0.2 1.2 hypothetical protein compare
MMJJ_RS05990 +0.2 1.3 phosphatase PAP2 family protein compare
MMJJ_RS09255 +0.2 0.9 hypothetical protein compare
MMJJ_RS02340 +0.2 1.1 SAM-dependent methyltransferase compare
MMJJ_RS02000 +0.2 0.7 AzlD domain-containing protein compare
MMJJ_RS06045 +0.2 1.2 hypothetical protein compare
MMJJ_RS07645 +0.2 1.0 selenium-binding protein compare
MMJJ_RS02115 +0.2 1.2 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS06495 +0.2 0.5 hypothetical protein compare
MMJJ_RS04270 +0.2 0.8 DUF364 domain-containing protein compare
MMJJ_RS06295 +0.2 1.2 DUF2096 family protein compare
MMJJ_RS03045 +0.2 1.1 hypothetical protein compare
MMJJ_RS00840 +0.2 1.0 hypothetical protein compare
MMJJ_RS03715 +0.2 1.1 hypothetical protein compare
MMJJ_RS07865 +0.2 1.1 zinc ribbon domain-containing protein compare
MMJJ_RS02080 +0.2 1.3 AMP-binding protein compare
MMJJ_RS06450 +0.2 1.1 DUF3343 domain-containing protein compare
MMJJ_RS07805 +0.2 1.0 ferredoxin family protein compare
MMJJ_RS06765 +0.2 1.4 hypothetical protein compare
MMJJ_RS06555 +0.2 1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS02880 +0.2 1.1 hypothetical protein compare
MMJJ_RS04525 +0.2 0.7 hypothetical protein compare
MMJJ_RS07825 +0.1 0.7 YciI family protein compare
MMJJ_RS03385 +0.1 1.1 hypothetical protein compare
MMJJ_RS06800 +0.1 0.8 prefoldin subunit alpha compare
MMJJ_RS04810 +0.1 1.2 nitroreductase family protein compare
MMJJ_RS06055 +0.1 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS04295 +0.1 1.3 DUF2202 domain-containing protein compare
MMJJ_RS04250 +0.1 1.0 thioredoxin family protein compare
MMJJ_RS04950 +0.1 1.3 TIGR00375 family protein compare
MMJJ_RS03955 +0.1 1.1 hypothetical protein compare
MMJJ_RS01155 +0.1 0.8 hypothetical protein compare
MMJJ_RS05040 +0.1 1.1 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS04510 +0.1 1.2 hypothetical protein compare
MMJJ_RS04430 +0.1 1.2 purine NTPase compare
MMJJ_RS01505 +0.1 0.8 DUF2124 domain-containing protein compare
MMJJ_RS04305 +0.1 1.3 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS01670 +0.1 0.7 hypothetical protein compare
MMJJ_RS07765 +0.1 0.7 DMT family protein compare
MMJJ_RS01785 +0.1 0.2 50S ribosomal protein L14e compare
MMJJ_RS06945 +0.1 1.0 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS05790 +0.1 0.9 flagellin compare
MMJJ_RS02295 +0.1 1.2 hypothetical protein compare
MMJJ_RS07855 +0.1 1.1 YkgJ family cysteine cluster protein compare
MMJJ_RS03700 +0.1 0.8 hypothetical protein compare
MMJJ_RS02915 +0.1 0.9 hypothetical protein compare
MMJJ_RS07915 +0.1 1.0 CBS domain-containing protein compare
MMJJ_RS05885 +0.1 1.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS05690 +0.1 1.2 hypothetical protein compare
MMJJ_RS05235 +0.1 1.2 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS06580 +0.1 1.1 alanine dehydrogenase compare
MMJJ_RS07185 +0.1 0.6 DUF371 domain-containing protein compare
MMJJ_RS06520 +0.1 1.0 TldD/PmbA family protein compare
MMJJ_RS05400 +0.1 0.6 CoA-binding protein compare
MMJJ_RS05925 +0.1 0.9 DUF2099 family protein compare
MMJJ_RS05740 +0.1 1.0 archaellar assembly protein FlaJ compare
MMJJ_RS09050 +0.1 0.5 hypothetical protein compare
MMJJ_RS03415 +0.1 0.7 hypothetical protein compare
MMJJ_RS07685 +0.1 1.1 glycogen/starch synthase compare
MMJJ_RS07680 +0.1 1.0 glucose-6-phosphate isomerase compare
MMJJ_RS07025 +0.1 0.8 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04165 +0.1 0.9 sodium:solute symporter compare
MMJJ_RS05500 +0.1 1.1 hypothetical protein compare
MMJJ_RS06960 +0.1 1.1 CAP domain-containing protein compare
MMJJ_RS00760 +0.1 0.9 hypothetical protein compare
MMJJ_RS06710 +0.1 1.0 TldD/PmbA family protein compare
MMJJ_RS05290 +0.1 1.1 DUF4013 domain-containing protein compare
MMJJ_RS04350 +0.1 0.8 hypothetical protein compare
MMJJ_RS00965 +0.1 0.7 cyclophilin-like fold protein compare
MMJJ_RS05955 +0.1 1.0 radical SAM protein compare
MMJJ_RS09405 +0.1 0.4 hypothetical protein compare
MMJJ_RS06500 +0.1 0.8 class I SAM-dependent methyltransferase compare
MMJJ_RS07590 +0.1 0.9 flap endonuclease-1 compare
MMJJ_RS07385 +0.1 0.8 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS07920 +0.1 0.9 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS00810 +0.1 0.8 GTP-binding protein compare
MMJJ_RS00630 +0.1 0.8 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS01420 +0.1 0.9 hypothetical protein compare
MMJJ_RS05200 +0.1 0.9 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS09250 +0.1 0.4 hypothetical protein compare
MMJJ_RS08070 +0.1 0.9 alpha-glucan family phosphorylase compare
MMJJ_RS04560 +0.1 0.8 ABC transporter permease compare
MMJJ_RS04465 +0.1 0.8 MTAP family purine nucleoside phosphorylase compare
MMJJ_RS00865 +0.1 0.8 Ni/Fe hydrogenase subunit alpha compare
MMJJ_RS05700 +0.1 0.8 metallophosphoesterase compare
MMJJ_RS03530 +0.1 0.9 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS05715 +0.1 0.9 phosphoadenosine phosphosulfate reductase family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t1 experiments