Experiment set2IT039 for Ralstonia sp. UNC404CL21Col

Compare to:

1,2-Propanediol carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABZR87_RS01780 +1.1 2.0 MarC family protein compare
ABZR87_RS17485 +0.9 5.2 enoyl-CoA hydratase/isomerase family protein compare
ABZR87_RS07880 +0.9 2.9 hypothetical protein compare
ABZR87_RS19305 +0.8 3.1 SctK family type III secretion system sorting platform protein compare
ABZR87_RS21815 +0.7 1.2 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS05130 +0.7 1.3 CsbD family protein compare
ABZR87_RS02655 +0.7 5.9 anti-sigma factor compare
ABZR87_RS04190 +0.7 2.1 hypothetical protein compare
ABZR87_RS10230 +0.7 3.9 beta-N-acetylhexosaminidase compare
ABZR87_RS05635 +0.7 6.0 muropeptide transporter compare
ABZR87_RS01745 +0.6 3.4 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
ABZR87_RS12130 +0.6 1.8 LysR substrate-binding domain-containing protein compare
ABZR87_RS01375 +0.6 5.2 two-component system hybrid sensor histidine kinase/response regulator PhcR compare
ABZR87_RS12965 +0.6 1.9 tail protein X compare
ABZR87_RS08110 +0.6 4.4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
ABZR87_RS07385 +0.6 1.9 HIT family protein compare
ABZR87_RS16080 +0.6 2.2 P-II family nitrogen regulator compare
ABZR87_RS19320 +0.6 1.2 hypothetical protein compare
ABZR87_RS11560 +0.6 1.2 2TM domain-containing protein compare
ABZR87_RS23075 +0.6 1.3 tannase/feruloyl esterase family alpha/beta hydrolase compare
ABZR87_RS15290 +0.6 1.6 hypothetical protein compare
ABZR87_RS22910 +0.5 1.8 6-phosphogluconolactonase compare
ABZR87_RS22010 +0.5 2.4 hypothetical protein compare
ABZR87_RS11735 +0.5 1.0 chitin-binding domain-containing protein compare
ABZR87_RS11690 +0.5 3.6 ATP-binding cassette domain-containing protein compare
ABZR87_RS11615 +0.5 2.4 LysR family transcriptional regulator compare
ABZR87_RS20690 +0.5 1.3 recombinase-like helix-turn-helix domain-containing protein compare
ABZR87_RS07485 +0.5 1.7 acetyl-CoA C-acyltransferase compare
ABZR87_RS10910 +0.5 1.5 RodZ family helix-turn-helix domain-containing protein compare
ABZR87_RS14995 +0.5 1.3 diacylglycerol kinase compare
ABZR87_RS14415 +0.5 1.0 hemin uptake protein HemP compare
ABZR87_RS06405 +0.5 0.5 hypothetical protein compare
ABZR87_RS18620 +0.5 1.9 adenosylmethionine decarboxylase compare
ABZR87_RS14320 +0.5 2.1 (2Fe-2S)-binding protein compare
ABZR87_RS18655 +0.5 2.2 carbohydrate kinase compare
ABZR87_RS23095 +0.5 0.9 MarR family transcriptional regulator compare
ABZR87_RS14755 +0.5 2.6 urea ABC transporter ATP-binding subunit UrtE compare
ABZR87_RS12425 +0.5 1.1 ABC transporter ATP-binding protein compare
ABZR87_RS21940 +0.5 0.8 hypothetical protein compare
ABZR87_RS18315 +0.5 2.3 DUF971 domain-containing protein compare
ABZR87_RS18105 +0.5 0.9 hypothetical protein compare
ABZR87_RS13045 +0.5 2.3 phage tail assembly protein compare
ABZR87_RS05695 +0.5 2.3 2-dehydropantoate 2-reductase compare
ABZR87_RS11420 +0.5 1.3 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS21880 +0.5 3.0 histidine phosphatase family protein compare
ABZR87_RS14780 +0.5 1.6 MaoC family dehydratase compare
ABZR87_RS21810 +0.4 1.6 enoyl-CoA hydratase compare
ABZR87_RS09715 +0.4 2.8 hypothetical protein compare
ABZR87_RS19485 +0.4 1.0 H-NS histone family protein compare
ABZR87_RS17440 +0.4 1.1 (2Fe-2S)-binding protein compare
ABZR87_RS03950 +0.4 1.9 GNAT family N-acetyltransferase compare
ABZR87_RS14625 +0.4 2.2 hypothetical protein compare
ABZR87_RS13890 +0.4 2.7 hypothetical protein compare
ABZR87_RS21550 +0.4 1.7 glyoxylate/hydroxypyruvate reductase A compare
ABZR87_RS12120 +0.4 0.8 isocitrate lyase/phosphoenolpyruvate mutase family protein compare
ABZR87_RS06030 +0.4 0.6 AraC family transcriptional regulator compare
ABZR87_RS12990 +0.4 1.7 phage tail protein compare
ABZR87_RS09080 +0.4 2.7 phage holin family protein compare
ABZR87_RS19045 +0.4 2.2 DUF333 domain-containing protein compare
ABZR87_RS06475 +0.4 2.1 PhaM family polyhydroxyalkanoate granule multifunctional regulatory protein compare
ABZR87_RS19265 +0.4 2.1 LuxR family transcriptional regulator compare
ABZR87_RS08465 +0.4 1.2 GtrA family protein compare
ABZR87_RS04420 +0.4 1.7 hypothetical protein compare
ABZR87_RS01370 +0.4 3.4 ATP-binding protein compare
ABZR87_RS17930 +0.4 2.6 flagellar transcriptional regulator FlhD compare
ABZR87_RS00500 +0.4 2.2 LysR substrate-binding domain-containing protein compare
ABZR87_RS11610 +0.4 2.2 universal stress protein compare
ABZR87_RS12000 +0.4 1.5 DUF2182 domain-containing protein compare
ABZR87_RS07595 +0.4 2.5 anhydro-N-acetylmuramic acid kinase compare
ABZR87_RS18975 +0.4 0.9 entericidin A/B family lipoprotein compare
ABZR87_RS15150 +0.4 1.8 cold shock domain-containing protein compare
ABZR87_RS01690 +0.4 0.6 collagen-like triple helix repeat-containing protein compare
ABZR87_RS12880 +0.4 1.8 cytochrome o ubiquinol oxidase subunit IV compare
ABZR87_RS20160 +0.4 1.6 OmpA family protein compare
ABZR87_RS06920 +0.4 1.4 maleylacetoacetate isomerase compare
ABZR87_RS12330 +0.4 1.1 hypothetical protein compare
ABZR87_RS03625 +0.4 1.2 hypothetical protein compare
ABZR87_RS03990 +0.4 2.1 GFA family protein compare
ABZR87_RS22560 +0.4 1.9 glutathione S-transferase compare
ABZR87_RS18950 +0.3 2.1 3-keto-5-aminohexanoate cleavage protein compare
ABZR87_RS20140 +0.3 0.8 PAAR domain-containing protein compare
ABZR87_RS13130 +0.3 1.9 ogr/Delta-like zinc finger family protein compare
ABZR87_RS23360 +0.3 0.7 chemotaxis response regulator protein-glutamate methylesterase compare
ABZR87_RS02565 +0.3 1.5 glutamate synthase subunit beta compare
ABZR87_RS02645 +0.3 1.6 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
ABZR87_RS12615 +0.3 1.4 branched-chain amino acid ABC transporter permease compare
ABZR87_RS06090 +0.3 1.4 YoaK family protein compare
ABZR87_RS08915 +0.3 0.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABZR87_RS23055 +0.3 1.7 YetF domain-containing protein compare
ABZR87_RS23380 +0.3 0.8 chemotaxis protein CheW compare
ABZR87_RS10465 +0.3 1.4 DUF1330 domain-containing protein compare
ABZR87_RS20675 +0.3 1.1 cupin domain-containing protein compare
ABZR87_RS15755 +0.3 1.9 ABC transporter ATP-binding protein compare
ABZR87_RS12100 +0.3 1.7 DsbA family protein compare
ABZR87_RS13015 +0.3 2.3 baseplate J/gp47 family protein compare
ABZR87_RS08540 +0.3 1.2 TPM domain-containing protein compare
ABZR87_RS21380 +0.3 1.8 hypothetical protein compare
ABZR87_RS18405 +0.3 1.7 hypothetical protein compare
ABZR87_RS03755 +0.3 1.8 TlpA disulfide reductase family protein compare
ABZR87_RS09755 +0.3 1.5 chromate transporter compare
ABZR87_RS00055 +0.3 1.9 threonine-phosphate decarboxylase CobD compare
ABZR87_RS10425 +0.3 1.9 DNA internalization-related competence protein ComEC/Rec2 compare
ABZR87_RS03840 +0.3 1.2 arsenate reductase (glutaredoxin) compare
ABZR87_RS06910 +0.3 1.2 ANTAR domain-containing protein compare
ABZR87_RS03825 +0.3 2.0 MBL fold metallo-hydrolase compare
ABZR87_RS20860 +0.3 1.5 FMN-binding negative transcriptional regulator compare
ABZR87_RS05250 +0.3 1.4 3-oxo-tetronate kinase compare
ABZR87_RS14925 +0.3 2.2 hypothetical protein compare
ABZR87_RS19860 +0.3 1.3 hypothetical protein compare
ABZR87_RS05520 +0.3 1.1 hypothetical protein compare
ABZR87_RS21760 +0.3 1.7 methionine ABC transporter permease compare
ABZR87_RS00180 +0.3 1.5 NAD(P)-dependent alcohol dehydrogenase compare
ABZR87_RS07095 +0.3 1.7 ribbon-helix-helix domain-containing protein compare
ABZR87_RS17800 +0.3 1.4 hypothetical protein compare
ABZR87_RS13110 +0.3 1.7 hypothetical protein compare
ABZR87_RS04015 +0.3 1.3 hypothetical protein compare
ABZR87_RS08410 +0.3 1.6 hypothetical protein compare
ABZR87_RS11730 +0.3 1.2 M55 family metallopeptidase compare
ABZR87_RS14050 +0.3 1.3 phosphohistidine phosphatase SixA compare
ABZR87_RS20430 +0.3 1.2 YfiR family protein compare
ABZR87_RS01020 +0.3 1.6 formimidoylglutamase compare
ABZR87_RS08385 +0.3 1.5 SDR family NAD(P)-dependent oxidoreductase compare
ABZR87_RS15395 +0.3 1.3 uracil phosphoribosyltransferase compare
ABZR87_RS21225 +0.3 0.9 LysR family transcriptional regulator compare
ABZR87_RS17850 +0.3 1.0 2-hydroxychromene-2-carboxylate isomerase compare
ABZR87_RS00250 +0.3 1.9 MFS transporter compare
ABZR87_RS11180 +0.3 1.5 fumarate/nitrate reduction transcriptional regulator Fnr compare
ABZR87_RS04225 +0.3 0.7 alpha/beta hydrolase compare
ABZR87_RS07540 +0.3 2.2 class II glutamine amidotransferase compare
ABZR87_RS18470 +0.3 1.5 lipocalin-like domain-containing protein compare
ABZR87_RS00015 +0.3 2.6 autotransporter assembly complex family protein compare
ABZR87_RS16665 +0.3 1.9 GNAT family N-acetyltransferase compare
ABZR87_RS13125 +0.3 1.8 hypothetical protein compare
ABZR87_RS17085 +0.3 1.0 hypothetical protein compare
ABZR87_RS00820 +0.3 0.7 YajQ family cyclic di-GMP-binding protein compare
ABZR87_RS04185 +0.3 1.7 hypothetical protein compare
ABZR87_RS00575 +0.3 2.3 HipA N-terminal domain-containing protein compare
ABZR87_RS13420 +0.3 2.1 D-alanyl-D-alanine endopeptidase compare
ABZR87_RS01420 +0.3 0.8 outer membrane protein assembly factor BamE compare
ABZR87_RS08430 +0.3 2.2 Crp/Fnr family transcriptional regulator compare
ABZR87_RS14720 +0.3 1.1 urease accessory UreF family protein compare
ABZR87_RS00600 +0.3 0.8 hypothetical protein compare
ABZR87_RS01075 +0.3 2.0 MprA protease, GlyGly-CTERM protein-sorting domain-containing form compare
ABZR87_RS15075 +0.3 1.8 hydroxyisourate hydrolase compare
ABZR87_RS18100 +0.3 1.3 type III secretion system inner membrane ring lipoprotein SctJ compare
ABZR87_RS18355 +0.3 2.1 ABC transporter permease compare
ABZR87_RS21835 +0.3 1.0 hypothetical protein compare
ABZR87_RS12275 +0.3 1.5 LysR family transcriptional regulator compare
ABZR87_RS02400 +0.3 1.7 Do family serine endopeptidase compare
ABZR87_RS19205 +0.3 0.8 hypothetical protein compare
ABZR87_RS05075 +0.3 1.3 metal-dependent hydrolase compare
ABZR87_RS13095 +0.3 2.0 hypothetical protein compare
ABZR87_RS23000 +0.3 1.1 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS15200 +0.3 2.0 YXWGXW repeat-containing protein compare
ABZR87_RS03560 +0.3 2.0 hypothetical protein compare
ABZR87_RS12580 +0.3 1.4 bifunctional nicotinamidase/pyrazinamidase compare
ABZR87_RS16930 +0.3 1.6 MASE4 domain-containing protein compare
ABZR87_RS17540 +0.3 2.0 SMP-30/gluconolactonase/LRE family protein compare
ABZR87_RS23180 +0.3 0.6 ABC transporter ATP-binding protein compare
ABZR87_RS11075 +0.3 1.4 hypothetical protein compare
ABZR87_RS04180 +0.3 1.4 TSUP family transporter compare
ABZR87_RS18485 +0.3 1.6 GGDEF domain-containing protein compare
ABZR87_RS03995 +0.3 1.6 Rieske 2Fe-2S domain-containing protein compare
ABZR87_RS13585 +0.3 1.6 nuclear transport factor 2 family protein compare
ABZR87_RS15680 +0.3 1.7 DNA polymerase I compare
ABZR87_RS13635 +0.3 1.8 hypothetical protein compare
ABZR87_RS09510 +0.3 0.9 helix-hairpin-helix domain-containing protein compare
ABZR87_RS21045 +0.3 1.3 cyclopropane-fatty-acyl-phospholipid synthase family protein compare
ABZR87_RS10100 +0.3 1.8 Rieske (2Fe-2S) protein compare
ABZR87_RS17760 +0.3 0.8 ATP-binding cassette domain-containing protein compare
ABZR87_RS06255 +0.3 1.4 glyoxylate/hydroxypyruvate reductase A compare
ABZR87_RS19905 +0.3 1.0 hypothetical protein compare
ABZR87_RS22395 +0.3 1.3 citrate:proton symporter compare
ABZR87_RS02485 +0.3 0.4 MarC family protein compare
ABZR87_RS11535 +0.3 0.7 alpha/beta hydrolase compare
ABZR87_RS20230 +0.3 1.2 Hcp family type VI secretion system effector compare
ABZR87_RS22875 +0.3 0.5 chorismate mutase compare
ABZR87_RS09860 +0.3 1.2 spermidine synthase compare
ABZR87_RS23200 +0.3 1.7 FadR/GntR family transcriptional regulator compare
ABZR87_RS09900 +0.3 2.1 DMT family transporter compare
ABZR87_RS18910 +0.3 0.8 DUF2239 family protein compare
ABZR87_RS03310 +0.3 1.6 DUF1835 domain-containing protein compare
ABZR87_RS04435 +0.3 1.6 lysozyme inhibitor LprI family protein compare
ABZR87_RS07610 +0.3 1.3 histidine phosphatase family protein compare
ABZR87_RS13115 +0.3 1.5 hypothetical protein compare
ABZR87_RS19665 +0.3 1.7 CoA-acylating methylmalonate-semialdehyde dehydrogenase compare
ABZR87_RS08740 +0.3 2.2 hypothetical protein compare
ABZR87_RS08165 +0.3 1.1 amidase compare
ABZR87_RS22695 +0.3 1.7 MATE family efflux transporter compare
ABZR87_RS04640 +0.3 0.8 hypothetical protein compare
ABZR87_RS11600 +0.3 1.2 aspartate/glutamate racemase family protein compare
ABZR87_RS01380 +0.2 1.5 response regulator compare
ABZR87_RS12995 +0.2 1.5 phage virion morphogenesis protein compare
ABZR87_RS20795 +0.2 0.9 peptide chain release factor H compare
ABZR87_RS21170 +0.2 0.7 ABC transporter ATP-binding protein compare
ABZR87_RS05790 +0.2 2.0 RidA family protein compare
ABZR87_RS00570 +0.2 1.9 DMT family transporter compare
ABZR87_RS04695 +0.2 0.8 hypothetical protein compare
ABZR87_RS20270 +0.2 1.4 hypothetical protein compare
ABZR87_RS03615 +0.2 1.5 Hsp20/alpha crystallin family protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source 1,2-Propanediol in Ralstonia sp. UNC404CL21Col

For carbon source 1,2-Propanediol across organisms