Experiment set2IT038 for Methanococcus maripaludis JJ

Compare to:

H2 McCas, 5g/L bicarb, 40 psi H2CO2

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.6 9.9 hypothetical protein compare
MMJJ_RS04720 +1.6 2.0 IMP dehydrogenase compare
MMJJ_RS05765 +1.0 1.6 flagellar protein E compare
MMJJ_RS08450 +0.9 6.7 undecaprenyl-diphosphate phosphatase compare
MMJJ_RS03205 +0.8 5.4 metallophosphoesterase compare
MMJJ_RS03360 +0.8 1.6 hypothetical protein compare
MMJJ_RS04580 +0.7 5.7 2-phosphosulfolactate phosphatase compare
MMJJ_RS01100 +0.7 1.6 helix-turn-helix domain-containing protein compare
MMJJ_RS08830 +0.7 3.0 hypothetical protein compare
MMJJ_RS05930 +0.7 1.1 cell division protein SepF compare
MMJJ_RS04575 +0.7 4.0 DUF116 domain-containing protein compare
MMJJ_RS04215 +0.7 6.0 DMT family transporter compare
MMJJ_RS00415 +0.6 3.0 DedA family protein compare
MMJJ_RS00035 +0.6 5.3 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS04935 +0.6 2.0 4Fe-4S binding protein compare
MMJJ_RS04360 +0.6 4.1 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07035 +0.6 1.0 glycosyl transferase compare
MMJJ_RS00045 +0.6 4.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS07040 +0.5 0.7 preprotein translocase subunit SecY compare
MMJJ_RS00040 +0.5 2.8 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS04480 +0.5 2.2 hypothetical protein compare
MMJJ_RS00050 +0.4 3.1 AAA family ATPase compare
MMJJ_RS01785 +0.4 0.9 50S ribosomal protein L14e compare
MMJJ_RS05770 +0.4 1.0 flagellar protein D compare
MMJJ_RS06940 +0.4 3.0 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS06055 +0.4 3.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS01060 +0.4 2.1 ABC transporter ATP-binding protein compare
MMJJ_RS00055 +0.4 2.6 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS07230 +0.4 3.2 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07235 +0.4 3.6 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06210 +0.4 2.8 hypothetical protein compare
MMJJ_RS00480 +0.4 3.3 flippase compare
MMJJ_RS00525 +0.4 1.6 Dabb family protein compare
MMJJ_RS07225 +0.4 2.7 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS09255 +0.4 1.6 hypothetical protein compare
MMJJ_RS06130 +0.4 2.0 hypothetical protein compare
MMJJ_RS09390 +0.4 1.4 hypothetical protein compare
MMJJ_RS06535 +0.3 3.0 UPF0104 family protein compare
MMJJ_RS06810 +0.3 3.0 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS07590 +0.3 2.6 flap endonuclease-1 compare
MMJJ_RS03655 +0.3 1.4 replication factor C large subunit compare
MMJJ_RS08935 +0.3 0.7 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS06115 +0.3 2.7 pyruvate kinase compare
MMJJ_RS04780 +0.3 1.2 nucleic acid-binding protein compare
MMJJ_RS07220 +0.3 2.8 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS03430 +0.3 1.7 winged helix-turn-helix domain-containing protein compare
MMJJ_RS01125 +0.3 2.1 hypothetical protein compare
MMJJ_RS08380 +0.3 1.1 hypothetical protein compare
MMJJ_RS06380 +0.3 1.0 signal recognition particle protein Srp54 compare
MMJJ_RS07485 +0.3 2.2 DedA family protein compare
MMJJ_RS03605 +0.3 1.6 TIGR00297 family protein compare
MMJJ_RS07660 +0.3 1.8 carbonic anhydrase compare
MMJJ_RS00510 +0.3 2.5 DEAD/DEAH box helicase compare
MMJJ_RS03410 +0.3 1.0 hypothetical protein compare
MMJJ_RS08730 +0.3 2.4 glycosyltransferase family 4 protein compare
MMJJ_RS05970 +0.3 1.2 MJ0307 family thioredoxin compare
MMJJ_RS01035 +0.3 1.6 hypothetical protein compare
MMJJ_RS06755 +0.3 2.3 diadenylate cyclase compare
MMJJ_RS06585 +0.3 2.2 alanine racemase compare
MMJJ_RS00060 +0.3 2.3 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS09365 +0.3 1.4 hypothetical protein compare
MMJJ_RS00830 +0.3 2.1 corrinoid protein compare
MMJJ_RS09325 +0.3 1.7 hypothetical protein compare
MMJJ_RS09370 +0.3 1.0 heavy-metal-associated domain-containing protein compare
MMJJ_RS07630 +0.2 1.8 hypothetical protein compare
MMJJ_RS06495 +0.2 1.0 hypothetical protein compare
MMJJ_RS06680 +0.2 1.7 DUF366 family protein compare
MMJJ_RS07835 +0.2 1.8 UPF0489 family protein compare
MMJJ_RS09380 +0.2 1.0 hypothetical protein compare
MMJJ_RS04055 +0.2 1.3 hypothetical protein compare
MMJJ_RS06465 +0.2 1.6 hypothetical protein compare
MMJJ_RS00420 +0.2 1.5 CBS domain-containing protein compare
MMJJ_RS08805 +0.2 1.5 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMJJ_RS08165 +0.2 1.4 thermonuclease family protein compare
MMJJ_RS06085 +0.2 1.5 proteasome assembly chaperone family protein compare
MMJJ_RS08930 +0.2 1.7 5'/3'-nucleotidase SurE compare
MMJJ_RS01825 +0.2 1.4 DNA repair and recombination protein RadB compare
MMJJ_RS07665 +0.2 2.0 formate dehydrogenase subunit alpha compare
MMJJ_RS07825 +0.2 1.0 YciI family protein compare
MMJJ_RS06440 +0.2 1.7 DUF4870 domain-containing protein compare
MMJJ_RS06560 +0.2 1.7 site-2 protease family protein compare
MMJJ_RS09265 +0.2 0.9 hypothetical protein compare
MMJJ_RS01010 +0.2 2.0 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS01405 +0.2 0.4 proline--tRNA ligase compare
MMJJ_RS01950 +0.2 1.7 hypothetical protein compare
MMJJ_RS07690 +0.2 1.6 glycosyltransferase family 4 protein compare
MMJJ_RS06765 +0.2 1.8 hypothetical protein compare
MMJJ_RS04175 +0.2 1.2 hypothetical protein compare
MMJJ_RS06550 +0.2 1.8 ABC transporter permease compare
MMJJ_RS03915 +0.2 1.3 hypothetical protein compare
MMJJ_RS06445 +0.2 1.8 hypothetical protein compare
MMJJ_RS06770 +0.2 1.7 hypothetical protein compare
MMJJ_RS03690 +0.2 1.2 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS06105 +0.2 1.6 DUF99 family protein compare
MMJJ_RS01955 +0.2 1.7 hypothetical protein compare
MMJJ_RS06470 +0.2 1.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS00460 +0.2 1.0 selenouridine synthase SelU-like subunit compare
MMJJ_RS08740 +0.2 1.7 class I SAM-dependent methyltransferase compare
MMJJ_RS05190 +0.2 1.2 gamma carbonic anhydrase family protein compare
MMJJ_RS01515 +0.2 1.2 DUF2178 domain-containing protein compare
MMJJ_RS01615 +0.2 1.2 MoaD/ThiS family protein compare
MMJJ_RS06520 +0.2 1.4 TldD/PmbA family protein compare
MMJJ_RS01275 +0.2 1.2 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS01920 +0.2 1.6 phosphoglycerate mutase compare
MMJJ_RS08075 +0.2 1.5 ATP-dependent DNA helicase compare
MMJJ_RS07610 +0.2 1.4 DUF2119 domain-containing protein compare
MMJJ_RS07655 +0.2 1.5 hypothetical protein compare
MMJJ_RS06275 +0.2 1.1 hypothetical protein compare
MMJJ_RS00785 +0.2 0.5 hypothetical protein compare
MMJJ_RS04135 +0.2 1.2 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS05680 +0.2 1.6 hypothetical protein compare
MMJJ_RS08400 +0.2 1.1 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS07595 +0.2 0.8 hypothetical protein compare
MMJJ_RS02665 +0.2 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS09155 +0.2 1.4 RluA family pseudouridine synthase compare
MMJJ_RS03725 +0.2 0.6 sulfurtransferase TusA family protein compare
MMJJ_RS07215 +0.2 1.4 TIGR00341 family protein compare
MMJJ_RS01290 +0.2 1.2 hypothetical protein compare
MMJJ_RS05695 +0.2 1.2 class III signal peptide-containing protein compare
MMJJ_RS04810 +0.2 1.2 nitroreductase family protein compare
MMJJ_RS09145 +0.2 1.1 exodeoxyribonuclease III compare
MMJJ_RS08345 +0.2 1.2 flavodoxin family protein compare
MMJJ_RS09200 +0.2 1.3 Nre family DNA repair protein compare
MMJJ_RS01960 +0.2 0.7 glycosyltransferase family 2 protein compare
MMJJ_RS09330 +0.2 1.0 hypothetical protein compare
MMJJ_RS05710 +0.2 0.6 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS08040 +0.2 1.3 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS03440 +0.2 1.2 hypothetical protein compare
MMJJ_RS07645 +0.1 1.1 selenium-binding protein compare
MMJJ_RS07795 +0.1 1.0 cupin domain-containing protein compare
MMJJ_RS06720 +0.1 1.3 mechanosensitive ion channel family protein compare
MMJJ_RS06430 +0.1 1.1 haloacid dehalogenase compare
MMJJ_RS05885 +0.1 1.3 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS06555 +0.1 1.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS03070 +0.1 0.4 MetS family NSS transporter small subunit compare
MMJJ_RS06280 +0.1 1.2 hypothetical protein compare
MMJJ_RS07450 +0.1 1.1 hypothetical protein compare
MMJJ_RS05290 +0.1 1.3 DUF4013 domain-containing protein compare
MMJJ_RS05985 +0.1 1.1 ABC transporter substrate-binding protein compare
MMJJ_RS08385 +0.1 1.1 class II SORL domain-containing protein compare
MMJJ_RS06120 +0.1 1.1 DUF4013 domain-containing protein compare
MMJJ_RS07210 +0.1 1.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS07910 +0.1 1.1 CBS domain-containing protein compare
MMJJ_RS06580 +0.1 1.2 alanine dehydrogenase compare
MMJJ_RS02245 +0.1 1.1 DUF432 domain-containing protein compare
MMJJ_RS01990 +0.1 0.7 universal stress protein compare
MMJJ_RS01285 +0.1 0.9 CopG family ribbon-helix-helix protein compare
MMJJ_RS01250 +0.1 0.8 hypothetical protein compare
MMJJ_RS08675 +0.1 1.0 phosphate ABC transporter ATP-binding protein PstB compare
MMJJ_RS08460 +0.1 1.1 metallophosphoesterase compare
MMJJ_RS05750 +0.1 1.1 flagellar accessory protein FlaH compare
MMJJ_RS01230 +0.1 1.0 EamA family transporter compare
MMJJ_RS05975 +0.1 1.1 sulfurtransferase TusA family protein compare
MMJJ_RS07480 +0.1 1.2 FAD-dependent oxidoreductase compare
MMJJ_RS07635 +0.1 1.0 response regulator transcription factor compare
MMJJ_RS08690 +0.1 1.0 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS03080 +0.1 1.0 carbohydrate kinase family protein compare
MMJJ_RS04465 +0.1 1.0 MTAP family purine nucleoside phosphorylase compare
MMJJ_RS07025 +0.1 0.8 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS03715 +0.1 0.9 hypothetical protein compare
MMJJ_RS07385 +0.1 1.0 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS05745 +0.1 1.0 type II/IV secretion system ATPase subunit compare
MMJJ_RS03185 +0.1 0.3 alanine--tRNA ligase compare
MMJJ_RS02125 +0.1 0.7 hypothetical protein compare
MMJJ_RS09060 +0.1 0.9 hypothetical protein compare
MMJJ_RS02320 +0.1 0.8 VWA domain-containing protein compare
MMJJ_RS00070 +0.1 0.5 CooT family nickel-binding protein compare
MMJJ_RS07760 +0.1 0.9 GNAT family N-acetyltransferase compare
MMJJ_RS03370 +0.1 0.5 hypothetical protein compare
MMJJ_RS08160 +0.1 0.8 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS09105 +0.1 1.0 AI-2E family transporter compare
MMJJ_RS06960 +0.1 1.1 CAP domain-containing protein compare
MMJJ_RS05510 +0.1 0.9 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05250 +0.1 0.8 HDIG domain-containing protein compare
MMJJ_RS03805 +0.1 0.4 hypothetical protein compare
MMJJ_RS04375 +0.1 0.3 hypothetical protein compare
MMJJ_RS05505 +0.1 1.1 hypothetical protein compare
MMJJ_RS07365 +0.1 1.0 CatB-related O-acetyltransferase compare
MMJJ_RS01770 +0.1 0.7 TOBE domain-containing protein compare
MMJJ_RS04765 +0.1 0.8 metal-dependent hydrolase compare
MMJJ_RS05740 +0.1 1.0 archaellar assembly protein FlaJ compare
MMJJ_RS02885 +0.1 0.8 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMJJ_RS00540 +0.1 0.7 hypothetical protein compare
MMJJ_RS08370 +0.1 0.7 hypothetical protein compare
MMJJ_RS06800 +0.1 0.8 prefoldin subunit alpha compare
MMJJ_RS08880 +0.1 0.9 IMPACT family protein compare
MMJJ_RS05730 +0.1 1.0 TIM barrel protein compare
MMJJ_RS08885 +0.1 0.9 cysteine--tRNA ligase compare
MMJJ_RS00675 +0.1 0.9 nitrogenase compare
MMJJ_RS05760 +0.1 1.0 flagellar protein F compare
MMJJ_RS05940 +0.1 0.9 HAD family hydrolase compare
MMJJ_RS03045 +0.1 0.8 hypothetical protein compare
MMJJ_RS08175 +0.1 0.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS07865 +0.1 0.8 zinc ribbon domain-containing protein compare
MMJJ_RS07255 +0.1 1.0 hypothetical protein compare
MMJJ_RS06710 +0.1 1.0 TldD/PmbA family protein compare
MMJJ_RS04300 +0.1 0.7 hypothetical protein compare
MMJJ_RS06100 +0.1 0.9 rubrerythrin compare
MMJJ_RS06640 +0.1 0.8 YfcE family phosphodiesterase compare
MMJJ_RS08025 +0.1 0.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in rich t1 experiments