Experiment set2IT036 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Tween 20 carbon source

200 most important genes:

  gene name fitness t score description  
AO353_13070 -4.4 -6.1 phosphoserine phosphatase compare
AO353_07230 -4.0 -12.5 anthranilate synthase compare
AO353_12090 -4.0 -2.7 imidazole glycerol phosphate synthase subunit HisF compare
AO353_08345 -3.9 -7.0 dihydroxy-acid dehydratase compare
AO353_27735 -3.8 -8.4 isocitrate lyase compare
AO353_12070 -3.8 -6.8 imidazoleglycerol-phosphate dehydratase compare
AO353_02075 -3.7 -8.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_05115 -3.7 -10.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_12075 -3.7 -6.6 imidazole glycerol phosphate synthase subunit HisH compare
AO353_12520 -3.7 -10.3 glutamate synthase compare
AO353_06515 -3.7 -8.8 hypothetical protein conserved
AO353_00505 -3.6 -3.5 3-ketoacyl-CoA thiolase compare
AO353_20635 -3.6 -10.2 3-isopropylmalate dehydrogenase compare
AO353_12085 -3.6 -7.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_08885 -3.6 -17.1 polyphosphate kinase compare
AO353_12515 -3.6 -19.1 glutamate synthase compare
AO353_07495 -3.6 -17.4 acyl-CoA dehydrogenase compare
AO353_01375 -3.6 -6.4 phosphate acyltransferase compare
AO353_07220 -3.6 -7.9 anthranilate synthase compare
AO353_20665 -3.6 -10.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_14505 -3.5 -11.1 ketol-acid reductoisomerase compare
AO353_20625 -3.5 -4.2 3-isopropylmalate dehydratase compare
AO353_20695 -3.5 -6.3 O-succinylhomoserine sulfhydrylase compare
AO353_00510 -3.4 -6.0 multifunctional fatty acid oxidation complex subunit alpha compare
AO353_07210 -3.4 -5.6 indole-3-glycerol-phosphate synthase compare
AO353_08180 -3.3 -12.7 homoserine O-acetyltransferase compare
AO353_13165 -3.3 -5.5 ATP phosphoribosyltransferase regulatory subunit compare
AO353_19060 -3.3 -5.0 CysB family transcriptional regulator compare
AO353_07560 -3.3 -12.9 malate synthase G compare
AO353_02070 -3.2 -7.1 prephenate dehydratase compare
AO353_05110 -3.2 -10.7 histidinol dehydrogenase compare
AO353_10025 -3.1 -14.6 pyruvate carboxylase subunit B compare
AO353_14220 -3.1 -2.1 ribosomal large subunit pseudouridine synthase D compare
AO353_09240 -3.1 -2.1 acetylglutamate kinase compare
AO353_08185 -3.1 -10.6 methionine biosynthesis protein MetW compare
AO353_03580 -3.0 -3.6 ATP-dependent DNA helicase RuvB compare
AO353_12360 -3.0 -9.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_10670 -3.0 -8.2 shikimate dehydrogenase compare
AO353_22685 -3.0 -5.2 peroxidase compare
AO353_08685 -3.0 -9.0 N-acetylglutamate synthase compare
AO353_18220 -3.0 -14.7 isocitrate dehydrogenase conserved
AO353_11165 -2.9 -10.3 hypothetical protein compare
AO353_07215 -2.9 -7.8 anthranilate phosphoribosyltransferase compare
AO353_20620 -2.9 -6.6 isopropylmalate isomerase compare
AO353_10710 -2.9 -4.8 tryptophan synthase subunit beta compare
AO353_14495 -2.9 -9.8 acetolactate synthase 3 catalytic subunit compare
AO353_12365 -2.9 -4.4 phosphoribosyl-AMP cyclohydrolase compare
AO353_07155 -2.9 -7.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_11850 -2.9 -4.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_08475 -2.9 -9.3 phosphoserine phosphatase compare
AO353_15925 -2.8 -13.0 2-isopropylmalate synthase compare
AO353_04155 -2.8 -12.2 ornithine carbamoyltransferase compare
AO353_02710 -2.8 -9.9 (p)ppGpp synthetase compare
AO353_20540 -2.8 -8.5 aromatic amino acid aminotransferase compare
AO353_14595 -2.8 -9.7 carbonate dehydratase compare
AO353_20175 -2.7 -3.6 ATP-dependent Clp protease proteolytic subunit compare
AO353_00430 -2.7 -4.1 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_00310 -2.7 -9.4 transaldolase compare
AO353_04105 -2.7 -8.4 argininosuccinate synthase compare
AO353_10035 -2.7 -9.9 LysR family transcriptional regulator compare
AO353_12500 -2.6 -1.8 shikimate kinase compare
AO353_00865 -2.6 -10.0 phosphoenolpyruvate synthase compare
AO353_08165 -2.6 -3.1 pyrroline-5-carboxylate reductase compare
AO353_05080 -2.6 -11.3 sulfate adenylyltransferase compare
AO353_14115 -2.6 -6.5 gamma-glutamyl kinase compare
AO353_14500 -2.6 -7.1 acetolactate synthase 3 regulatory subunit compare
AO353_10030 -2.6 -11.2 pyruvate carboxylase subunit A compare
AO353_05075 -2.5 -10.4 adenylylsulfate kinase compare
AO353_09000 -2.5 -5.4 argininosuccinate lyase compare
AO353_06495 -2.4 -6.1 gamma-glutamyl phosphate reductase compare
AO353_08510 -2.4 -5.7 3-phosphoglycerate dehydrogenase compare
AO353_10445 -2.4 -1.6 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_12390 -2.3 -3.5 poly(3-hydroxyalkanoate) granule-associated protein PhaI compare
AO353_11775 -2.3 -7.1 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_08780 -2.3 -7.9 5-formyltetrahydrofolate cyclo-ligase compare
AO353_02250 -2.3 -4.4 chorismate synthase compare
AO353_00495 -2.2 -2.9 DNA topoisomerase I compare
AO353_12460 -2.2 -8.3 malate dehydrogenase compare
AO353_16940 -2.2 -5.5 deoxycytidine triphosphate deaminase compare
AO353_14370 -2.1 -7.1 glucose-6-phosphate isomerase compare
AO353_16530 -2.1 -2.8 ribonuclease HII compare
AO353_26045 -2.0 -2.9 hypothetical protein compare
AO353_04220 -2.0 -5.9 chemotaxis protein CheY compare
AO353_06520 -2.0 -6.6 murein hydrolase transporter LrgA conserved
AO353_08505 -2.0 -9.9 FAD-linked oxidase compare
AO353_08015 -1.9 -7.4 5,10-methylenetetrahydrofolate reductase compare
AO353_03585 -1.9 -3.1 ATP-dependent DNA helicase RuvA compare
AO353_22800 -1.8 -3.4 sulfite reductase compare
AO353_12115 -1.8 -2.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_07485 -1.8 -12.9 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
AO353_05105 -1.8 -8.5 histidinol-phosphate aminotransferase compare
AO353_12510 -1.7 -8.5 cell division protein compare
AO353_13665 -1.7 -6.4 hypothetical protein compare
AO353_07355 -1.7 -4.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_03795 -1.7 -4.4 fumarate hydratase compare
AO353_24130 -1.7 -2.5 hypothetical protein compare
AO353_16810 -1.7 -4.1 recombinase RecX compare
AO353_14400 -1.7 -4.2 Fis family transcriptional regulator compare
AO353_09045 -1.7 -2.7 hypothetical protein compare
AO353_03590 -1.7 -3.6 crossover junction endodeoxyribonuclease RuvC compare
AO353_11340 -1.7 -2.1 MarR family transcriptional regulator compare
AO353_13140 -1.6 -5.1 tRNA dimethylallyltransferase compare
AO353_23620 -1.6 -2.9 hypothetical protein compare
AO353_27090 -1.6 -2.7 hypothetical protein compare
AO353_02685 -1.6 -3.6 phosphoribosylglycinamide formyltransferase compare
AO353_12650 -1.6 -1.7 hypothetical protein compare
AO353_05150 -1.6 -4.4 ABC transporter ATP-binding protein compare
AO353_03615 -1.6 -2.7 cold-shock protein compare
AO353_15830 -1.6 -3.5 transcriptional regulator compare
AO353_10705 -1.6 -3.8 tryptophan synthase subunit alpha compare
AO353_14940 -1.6 -3.6 malate:quinone oxidoreductase compare
AO353_12400 -1.5 -6.2 TetR family transcriptional regulator conserved
AO353_05130 -1.5 -1.5 anti-anti-sigma factor compare
AO353_06045 -1.5 -5.9 exodeoxyribonuclease V subunit beta compare
AO353_12395 -1.5 -3.3 poly(3-hydroxyalkanoate) granule-associated protein PhaF compare
AO353_02040 -1.5 -2.9 integration host factor subunit beta compare
AO353_03020 -1.5 -6.5 arginine N-succinyltransferase compare
AO353_16210 -1.5 -9.8 XRE family transcriptional regulator compare
AO353_14420 -1.5 -3.2 molecular chaperone DnaK compare
AO353_07315 -1.5 -2.3 rRNA methyltransferase compare
AO353_19280 -1.4 -2.7 hypothetical protein compare
AO353_05625 -1.4 -1.6 transcription elongation factor GreA compare
AO353_04565 -1.4 -4.8 nucleoid-associated protein compare
AO353_00825 -1.4 -3.3 porin compare
AO353_16805 -1.4 -4.7 recombinase RecA compare
AO353_03015 -1.4 -4.0 arginine N-succinyltransferase compare
AO353_17100 -1.4 -2.8 hypothetical protein compare
AO353_11730 -1.4 -7.1 glutamate--cysteine ligase compare
AO353_27000 -1.4 -2.1 hypothetical protein compare
AO353_09890 -1.3 -4.5 phosphate ABC transporter ATP-binding protein compare
AO353_02720 -1.3 -4.6 cysteine synthase compare
AO353_02975 -1.3 -2.5 aspartate kinase compare
AO353_05420 -1.3 -1.8 peptide chain release factor 3 compare
AO353_18505 -1.3 -2.1 translation initiation factor 2 compare
AO353_06050 -1.3 -4.9 exodeoxyribonuclease V subunit gamma compare
AO353_07340 -1.3 -9.5 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
AO353_02060 -1.2 -2.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_08115 -1.2 -4.0 energy transducer TonB compare
AO353_10455 -1.2 -1.8 tRNA modification GTPase MnmE compare
AO353_15900 -1.2 -2.4 GTP-binding protein compare
AO353_05695 -1.2 -7.9 transcriptional regulator PdhR compare
AO353_16745 -1.2 -2.1 ArsR family transcriptional regulator compare
AO353_05135 -1.2 -5.6 toluene tolerance protein compare
AO353_22810 -1.2 -1.5 hypothetical protein compare
AO353_06040 -1.2 -2.7 exodeoxyribonuclease V subunit alpha compare
AO353_27650 -1.2 -3.6 cell division protein FtsK compare
AO353_07345 -1.2 -9.2 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
AO353_16450 -1.1 -7.2 protein-PII uridylyltransferase compare
AO353_13100 -1.1 -1.3 GTPase RsgA compare
AO353_12420 -1.1 -2.8 predicted FeS cluster maintenance protein (from data) compare
AO353_14150 -1.1 -1.6 peptidylprolyl isomerase compare
AO353_19030 -1.1 -5.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
AO353_14935 -1.1 -3.1 aminopeptidase compare
AO353_13640 -1.1 -3.5 histidine kinase compare
AO353_03150 -1.1 -3.0 peptidase M4 compare
AO353_07335 -1.1 -8.4 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
AO353_05140 -1.1 -5.1 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_09320 -1.1 -5.8 ATP-dependent DNA helicase RecG compare
AO353_01315 -1.1 -4.9 TetR family transcriptional regulator compare
AO353_16845 -1.1 -6.1 LysR family transcriptional regulator compare
AO353_03310 -1.1 -6.6 long-chain fatty acid--CoA ligase compare
AO353_12145 -1.1 -3.2 nitrogen regulation protein NR(I) compare
AO353_21455 -1.0 -1.5 cation:proton antiporter compare
AO353_08350 -1.0 -4.9 hypothetical protein compare
AO353_14990 -1.0 -1.6 hypothetical protein compare
AO353_10780 -1.0 -1.5 DNA-binding protein compare
AO353_10435 -1.0 -5.8 chromosome partitioning protein compare
AO353_20170 -1.0 -3.4 trigger factor compare
AO353_26945 -1.0 -1.9 transcriptional regulator compare
AO353_12105 -1.0 -4.2 peptidase S41 compare
AO353_11530 -1.0 -5.5 diguanylate cyclase compare
AO353_00870 -1.0 -3.1 hypothetical protein compare
AO353_07075 -1.0 -3.2 elongation factor Tu compare
AO353_00330 -1.0 -5.2 hypothetical protein compare
AO353_00490 -1.0 -2.1 PasA protein compare
AO353_09040 -1.0 -1.5 diaminopimelate epimerase compare
AO353_06745 -1.0 -1.9 zinc-binding protein compare
AO353_11770 -1.0 -1.5 molecular chaperone Hsp33 compare
AO353_00750 -1.0 -2.7 GntR family transcriptional regulator compare
AO353_18135 -1.0 -2.1 hypothetical protein compare
AO353_03630 -1.0 -6.4 porin compare
AO353_23400 -0.9 -1.7 hypothetical protein compare
AO353_08880 -0.9 -1.8 exopolyphosphatase compare
AO353_09285 -0.9 -5.8 reactive intermediate/imine deaminase compare
AO353_11750 -0.9 -2.0 ATPase compare
AO353_08265 -0.9 -3.3 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_13225 -0.9 -2.2 50S ribosomal protein L9 compare
AO353_12690 -0.9 -0.9 acyl carrier protein compare
AO353_24340 -0.9 -1.5 TetR family transcriptional regulator compare
AO353_15905 -0.9 -3.7 outer membrane protein assembly factor BamB compare
AO353_14740 -0.9 -2.1 GTP-binding protein compare
AO353_01350 -0.9 -3.9 4-amino-4-deoxychorismate lyase compare
AO353_25700 -0.9 -2.3 hypothetical protein compare
AO353_11080 -0.9 -6.3 NAD synthetase compare
AO353_15185 -0.9 -3.0 ATPase compare
AO353_00810 -0.9 -2.0 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
AO353_09265 -0.9 -1.8 hypothetical protein compare
AO353_14395 -0.9 -2.6 poly(A) polymerase compare
AO353_18715 -0.8 -1.4 histidine kinase compare
AO353_04185 -0.8 -3.6 DeoR family transcriptional regulator compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Tween 20 in Pseudomonas fluorescens FW300-N2E3

For carbon source Tween 20 across organisms