Experiment set2IT036 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Tween 20 carbon source

200 most detrimental genes:

  gene name fitness t score description  
AO353_27695 +1.4 9.8 isocitrate dehydrogenase compare
AO353_20425 +1.1 3.0 ArsC family transcriptional regulator compare
AO353_19250 +1.1 2.7 molybdenum cofactor guanylyltransferase compare
AO353_19340 +1.0 8.5 amino acid ABC transporter substrate-binding protein compare
AO353_21830 +1.0 8.4 chemotaxis protein CheY compare
AO353_10510 +1.0 2.1 benzoate transporter compare
AO353_02735 +0.9 8.3 chemotaxis protein CheY compare
AO353_23440 +0.9 2.5 hypothetical protein compare
AO353_08120 +0.9 3.7 hypothetical protein compare
AO353_25585 +0.9 2.1 argininosuccinate lyase compare
AO353_20865 +0.8 2.3 cold-shock protein compare
AO353_20925 +0.8 2.9 hypothetical protein compare
AO353_24415 +0.8 1.7 glutamine ABC transporter ATP-binding protein compare
AO353_02885 +0.8 1.4 flagellar biosynthesis protein FlgN compare
AO353_22195 +0.8 2.0 metal ABC transporter permease compare
AO353_12580 +0.8 2.1 type II secretory protein PulK compare
AO353_10320 +0.8 1.3 hypothetical protein compare
AO353_27500 +0.8 1.8 hypothetical protein compare
AO353_14915 +0.7 2.2 (2Fe-2S)-binding protein compare
AO353_15170 +0.7 2.7 cytochrome D ubiquinol oxidase subunit III compare
AO353_27585 +0.7 2.1 DNA repair protein compare
AO353_13740 +0.7 3.1 MFS transporter compare
AO353_02175 +0.7 2.1 carbon storage regulator compare
AO353_20245 +0.7 2.9 LysR family transcriptional regulator compare
AO353_23950 +0.7 2.2 hypothetical protein compare
AO353_04190 +0.7 1.7 glycerol-3-phosphate dehydrogenase compare
AO353_15480 +0.7 1.7 hypothetical protein compare
AO353_23170 +0.7 2.5 short-chain dehydrogenase compare
AO353_01055 +0.7 5.5 AraC family transcriptional regulator compare
AO353_10040 +0.7 4.5 transcriptional regulator compare
AO353_05240 +0.6 1.6 rod shape-determining protein MreD compare
AO353_26935 +0.6 1.8 LysR family transcriptional regulator compare
AO353_24000 +0.6 2.7 isochorismate synthase compare
AO353_03830 +0.6 1.2 antibiotic biosynthesis monooxygenase compare
AO353_12575 +0.6 2.4 type II secretion system protein GspJ compare
AO353_22270 +0.6 2.2 antibiotic biosynthesis monooxygenase compare
AO353_02640 +0.6 1.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_16645 +0.6 2.6 hypothetical protein compare
AO353_10990 +0.6 4.4 glutamate:protein symporter compare
AO353_03510 +0.6 2.1 glycine cleavage system protein T compare
AO353_12935 +0.6 2.4 glycosyltransferase compare
AO353_23350 +0.6 1.8 hypothetical protein compare
AO353_10730 +0.6 1.5 hypothetical protein compare
AO353_17940 +0.6 1.9 hypothetical protein compare
AO353_11155 +0.6 5.1 thioesterase compare
AO353_12950 +0.6 4.1 polymerase compare
AO353_03520 +0.6 1.9 hypothetical protein compare
AO353_15410 +0.6 0.7 hypothetical protein compare
AO353_13600 +0.6 2.3 precorrin-6Y C5,15-methyltransferase compare
AO353_23910 +0.6 1.8 response regulator compare
AO353_09775 +0.6 1.9 hypothetical protein compare
AO353_18655 +0.6 2.3 flagellar assembly protein FliT compare
AO353_24870 +0.6 1.8 hypothetical protein compare
AO353_22370 +0.6 2.0 branched-chain amino acid ABC transporter substrate-binding protein compare
AO353_26550 +0.6 0.8 hypothetical protein compare
AO353_25850 +0.5 3.1 peptidase C45 compare
AO353_26220 +0.5 1.4 hypothetical protein compare
AO353_19020 +0.5 1.6 hypothetical protein compare
AO353_09745 +0.5 1.0 hypothetical protein compare
AO353_12535 +0.5 1.6 hypothetical protein compare
AO353_04240 +0.5 1.2 chemotaxis protein CheW compare
AO353_20000 +0.5 1.8 phosphoribosyltransferase compare
AO353_12540 +0.5 1.8 hypothetical protein compare
AO353_11185 +0.5 4.0 channel protein TolC compare
AO353_11190 +0.5 4.3 ABC transporter compare
AO353_29165 +0.5 1.8 fructose-bisphosphate aldolase compare
AO353_17750 +0.5 1.5 transcriptional regulator compare
AO353_22360 +0.5 1.5 ABC transporter ATP-binding protein compare
AO353_28320 +0.5 1.7 aminopeptidase compare
AO353_24745 +0.5 1.2 hypothetical protein compare
AO353_15745 +0.5 2.5 hypothetical protein compare
AO353_22600 +0.5 1.2 hypothetical protein compare
AO353_23935 +0.5 2.4 hypothetical protein compare
AO353_01740 +0.5 4.3 TonB-dependent receptor compare
AO353_19335 +0.5 3.9 TetR family transcriptional regulator compare
AO353_09835 +0.5 2.1 rubredoxin compare
AO353_28815 +0.5 1.4 hypothetical protein compare
AO353_03330 +0.5 2.0 aldehyde dehydrogenase compare
AO353_03455 +0.5 2.0 acyl-CoA transferase compare
AO353_23785 +0.5 1.2 hypothetical protein compare
AO353_27130 +0.5 1.2 hypothetical protein compare
AO353_19070 +0.5 1.2 hypothetical protein compare
AO353_12940 +0.5 2.5 glycosyl transferase compare
AO353_17180 +0.5 2.2 hypothetical protein compare
AO353_26210 +0.5 2.3 hypothetical protein compare
AO353_27400 +0.5 1.6 hypothetical protein compare
AO353_18130 +0.5 1.3 hypothetical protein compare
AO353_17340 +0.5 2.2 glycerol acyltransferase compare
AO353_12790 +0.5 1.1 hypothetical protein compare
AO353_07270 +0.5 1.5 transcriptional regulator compare
AO353_02270 +0.5 2.1 isochorismatase compare
AO353_28015 +0.5 1.6 hypothetical protein compare
AO353_07460 +0.5 1.5 DNA-binding protein compare
AO353_21750 +0.5 1.1 peptidylprolyl isomerase compare
AO353_27440 +0.5 2.1 hypothetical protein compare
AO353_25355 +0.5 1.4 hypothetical protein compare
AO353_13920 +0.5 1.5 dihydroxyacetone kinase compare
AO353_13480 +0.5 2.5 chaperone modulatory protein CbpM compare
AO353_21595 +0.5 2.4 serine/threonine protein kinase compare
AO353_12315 +0.5 3.7 glucosyltransferase MdoH compare
AO353_13085 +0.5 1.9 histidine kinase compare
AO353_15280 +0.5 1.9 hypothetical protein compare
AO353_04925 +0.5 2.2 aldolase compare
AO353_08465 +0.5 3.9 phosphoenolpyruvate-protein phosphotransferase compare
AO353_27420 +0.5 1.9 DNA-binding protein compare
AO353_13015 +0.4 2.1 nitrate reductase compare
AO353_24045 +0.4 1.9 iron ABC transporter ATP-binding protein compare
AO353_15000 +0.4 1.7 glycerate dehydrogenase compare
AO353_27245 +0.4 2.0 lysozyme compare
AO353_07535 +0.4 2.1 ModE family transcriptional regulator compare
AO353_04090 +0.4 1.2 leucyl-tRNA synthetase compare
AO353_18985 +0.4 1.5 hypothetical protein compare
AO353_16355 +0.4 1.8 TetR family transcriptional regulator compare
AO353_03710 +0.4 1.3 formyltetrahydrofolate deformylase compare
AO353_05340 +0.4 2.2 histidine kinase compare
AO353_09765 +0.4 2.0 hypothetical protein compare
AO353_02995 +0.4 2.9 succinylglutamate desuccinylase compare
AO353_22135 +0.4 1.6 anaerobic ribonucleoside-triphosphate reductase activating protein compare
AO353_16345 +0.4 1.2 energy transducer TonB compare
AO353_13530 +0.4 0.9 ABC transporter ATP-binding protein compare
AO353_17935 +0.4 1.2 hypothetical protein compare
AO353_17305 +0.4 2.5 TetR family transcriptional regulator compare
AO353_12670 +0.4 1.6 glycosyl transferase compare
AO353_29180 +0.4 1.9 alpha/beta hydrolase compare
AO353_28390 +0.4 1.6 hypothetical protein compare
AO353_02600 +0.4 0.9 alpha-ribazole phosphatase compare
AO353_12590 +0.4 1.4 hypothetical protein compare
AO353_06455 +0.4 1.2 D-alanyl-D-alanine carboxypeptidase compare
AO353_00345 +0.4 2.3 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
AO353_24820 +0.4 2.2 histidine kinase compare
AO353_22890 +0.4 2.1 secretion protein HlyD compare
AO353_14970 +0.4 1.6 hypothetical protein compare
AO353_17515 +0.4 1.9 short-chain dehydrogenase compare
AO353_26610 +0.4 2.1 hypothetical protein compare
AO353_23670 +0.4 1.2 glutathione S-transferase compare
AO353_05525 +0.4 2.2 dephospho-CoA kinase compare
AO353_22350 +0.4 1.9 LuxR family transcriptional regulator compare
AO353_17985 +0.4 1.9 LysR family transcriptional regulator compare
AO353_25745 +0.4 1.6 LysR family transcriptional regulator compare
AO353_03430 +0.4 1.4 methylglyoxal synthase compare
AO353_22845 +0.4 1.9 GNAT family acetyltransferase compare
AO353_07830 +0.4 1.7 dimethylmenaquinone methyltransferase compare
AO353_03945 +0.4 1.6 hypothetical protein compare
AO353_21410 +0.4 1.2 hypothetical protein compare
AO353_19270 +0.4 2.4 LuxR family transcriptional regulator compare
AO353_00235 +0.4 1.2 transcriptional regulator compare
AO353_04650 +0.4 1.3 molybdenum cofactor biosynthesis protein MoaE compare
AO353_17535 +0.4 2.5 16S rRNA pseudouridine(516) synthase compare
AO353_26125 +0.4 1.4 hypothetical protein compare
AO353_20315 +0.4 1.7 cytochrome B compare
AO353_00165 +0.4 1.8 lysis protein compare
AO353_22375 +0.4 1.2 cytochrome c-550 PedF compare
AO353_25490 +0.4 1.4 transcriptional regulator compare
AO353_18970 +0.4 1.7 hydrolase TatD compare
AO353_20265 +0.4 1.2 spore coat protein compare
AO353_08380 +0.4 1.9 GTPase SAR1 compare
AO353_02160 +0.4 2.0 polyphosphate kinase compare
AO353_01000 +0.4 2.1 hypothetical protein compare
AO353_05280 +0.4 1.1 4-carboxymuconolactone decarboxylase compare
AO353_21315 +0.4 2.4 histidine kinase compare
AO353_17785 +0.4 1.2 hypothetical protein compare
AO353_16885 +0.4 1.8 hypothetical protein compare
AO353_12700 +0.4 2.0 3-oxoacyl-ACP synthase compare
AO353_04585 +0.4 1.5 ketosteroid isomerase compare
AO353_06275 +0.4 1.2 DNA polymerase III subunit epsilon compare
AO353_13660 +0.4 2.4 tRNA-dihydrouridine synthase B compare
AO353_23600 +0.4 1.6 cobalt chelatase compare
AO353_12880 +0.4 0.7 ADP-heptose--LPS heptosyltransferase compare
AO353_01905 +0.4 2.1 TetR family transcriptional regulator compare
AO353_09915 +0.4 2.6 long-chain acyl-CoA thioester hydrolase compare
AO353_23875 +0.4 1.5 ketosteroid isomerase compare
AO353_25335 +0.4 0.6 malonate decarboxylase acyl carrier protein compare
AO353_00480 +0.4 1.8 hypothetical protein compare
AO353_11180 +0.4 3.5 large adhesive protein compare
AO353_26115 +0.4 0.9 hypothetical protein compare
AO353_28790 +0.4 2.0 hypothetical protein compare
AO353_03420 +0.4 1.8 phosphogluconate dehydratase compare
AO353_18660 +0.4 2.6 AAA family ATPase compare
AO353_23145 +0.4 2.3 hypothetical protein compare
AO353_23385 +0.4 2.1 trans-2-enoyl-CoA reductase compare
AO353_26235 +0.4 1.4 hypothetical protein compare
AO353_24685 +0.4 0.9 hypothetical protein compare
AO353_28935 +0.4 1.2 ATPase compare
AO353_26645 +0.4 1.2 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
AO353_00695 +0.4 2.6 diguanylate cyclase compare
AO353_03215 +0.4 1.6 pyridoxamine 5'-phosphate oxidase compare
AO353_07910 +0.4 1.1 hypothetical protein compare
AO353_22120 +0.4 1.6 cyclic pyranopterin phosphate synthase MoaA compare
AO353_21825 +0.4 2.2 GNAT family acetyltransferase compare
AO353_11765 +0.4 2.2 RNA-binding protein compare
AO353_18945 +0.4 1.6 hypothetical protein compare
AO353_19490 +0.4 1.5 Fis family transcriptional regulator compare
AO353_12310 +0.4 2.9 glucan biosynthesis protein G compare
AO353_12415 +0.4 2.7 poly(R)-hydroxyalkanoic acid synthase compare
AO353_19720 +0.4 1.6 hemolysin D compare
AO353_19880 +0.4 2.1 universal stress protein compare
AO353_04060 +0.4 1.8 NADH:quinone oxidoreductase compare
AO353_11195 +0.4 3.0 hemolysin secretion protein D compare
AO353_00215 +0.4 2.1 capsid protein compare
AO353_22015 +0.4 1.8 short-chain dehydrogenase compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Tween 20 in Pseudomonas fluorescens FW300-N2E3

For carbon source Tween 20 across organisms