Experiment set2IT035 for Pedobacter sp. GW460-11-11-14-LB5

Compare to:

R2A with MreB Perturbing Compound A22 0.04 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA265_RS12890 +1.3 9.2 hypothetical protein compare
CA265_RS24780 +1.3 7.7 nucleoside-diphosphate kinase compare
CA265_RS25235 +1.3 9.1 hypothetical protein compare
CA265_RS23545 +1.3 2.4 NADH dehydrogenase subunit D compare
CA265_RS21900 +1.3 10.0 two-component sensor histidine kinase compare
CA265_RS23515 +1.2 6.1 hypothetical protein compare
CA265_RS06030 +1.1 2.4 SelT/selW/selH selenoprotein compare
CA265_RS18485 +1.1 4.9 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
CA265_RS18115 +1.1 6.8 gliding motility protein GldN compare
CA265_RS12945 +1.0 8.5 hypothetical protein compare
CA265_RS23510 +1.0 4.6 energy transducer TonB compare
CA265_RS15200 +1.0 3.5 hypothetical protein compare
CA265_RS17555 +0.9 7.4 hypothetical protein compare
CA265_RS09650 +0.9 2.4 diaminopimelate decarboxylase compare
CA265_RS09000 +0.9 1.9 hypothetical protein compare
CA265_RS18985 +0.9 3.5 hypothetical protein compare
CA265_RS23635 +0.9 7.0 gliding motility lipoprotein GldJ compare
CA265_RS18120 +0.9 7.0 gliding motility protein GldM compare
CA265_RS18990 +0.9 8.0 cell surface protein SprA compare
CA265_RS23520 +0.9 6.0 phosphate ABC transporter substrate-binding protein compare
CA265_RS03260 +0.9 5.7 multidrug ABC transporter ATP-binding protein compare
CA265_RS15085 +0.9 5.9 hypothetical protein compare
CA265_RS18130 +0.8 6.9 gliding motility-associated lipoprotein compare
CA265_RS15115 +0.8 4.8 porin compare
CA265_RS23140 +0.8 2.8 hypothetical protein compare
CA265_RS21360 +0.8 1.9 hypothetical protein compare
CA265_RS23640 +0.8 6.1 hypothetical protein compare
CA265_RS06585 +0.8 5.4 hypothetical protein compare
CA265_RS23905 +0.8 4.6 hypothetical protein compare
CA265_RS16990 +0.8 2.9 hypothetical protein compare
CA265_RS19740 +0.8 4.5 gliding motility lipoprotein GldD compare
CA265_RS17950 +0.8 3.6 hypothetical protein compare
CA265_RS03495 +0.8 2.0 cytochrome c biogenesis protein compare
CA265_RS18125 +0.8 4.1 gliding motility protein GldL compare
CA265_RS18530 +0.8 1.6 aspartate aminotransferase family protein compare
CA265_RS00025 +0.8 1.9 hypothetical protein compare
CA265_RS23755 +0.8 5.0 lauroyl acyltransferase compare
CA265_RS03290 +0.8 4.8 gliding motility-associated ABC transporter permease subunit GldF compare
CA265_RS03295 +0.8 6.1 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA265_RS06885 +0.7 1.0 hypothetical protein compare
CA265_RS13225 +0.7 5.3 exonuclease compare
CA265_RS23525 +0.7 5.7 hypothetical protein compare
CA265_RS19500 +0.7 4.1 methyltransferase type 11 compare
CA265_RS19140 +0.7 1.8 tRNA-Ile compare
CA265_RS18495 +0.7 1.4 hypothetical protein compare
CA265_RS13255 +0.7 4.6 leucine dehydrogenase compare
CA265_RS05985 +0.7 1.3 hypothetical protein compare
CA265_RS21255 +0.7 4.9 hypothetical protein compare
CA265_RS23675 +0.7 1.5 hypothetical protein compare
CA265_RS04275 +0.7 4.5 ATP-dependent protease ATP-binding subunit ClpX compare
CA265_RS20280 +0.7 2.2 DoxX family protein compare
CA265_RS10600 +0.7 2.8 RNA polymerase subunit sigma-24 compare
CA265_RS09705 +0.7 2.4 copper oxidase compare
CA265_RS21290 +0.7 2.3 hypothetical protein compare
CA265_RS23305 +0.6 1.2 hypothetical protein compare
CA265_RS18225 +0.6 3.7 DNA-binding response regulator compare
CA265_RS21915 +0.6 4.6 LacI family transcriptional regulator compare
CA265_RS01205 +0.6 2.7 import component protein compare
CA265_RS17315 +0.6 0.8 hypothetical protein compare
CA265_RS18190 +0.6 3.8 cupin compare
CA265_RS01200 +0.6 2.5 hypothetical protein compare
CA265_RS20645 +0.6 2.5 RNA polymerase subunit sigma-70 compare
CA265_RS01650 +0.6 4.5 hypothetical protein compare
CA265_RS04360 +0.6 4.3 hypothetical protein compare
CA265_RS12950 +0.6 3.6 hypothetical protein compare
CA265_RS21715 +0.6 3.5 hypothetical protein compare
CA265_RS03280 +0.6 1.6 hypothetical protein compare
CA265_RS25305 +0.6 2.0 hypothetical protein compare
CA265_RS02745 +0.6 2.0 hypothetical protein compare
CA265_RS12805 +0.6 3.1 hypothetical protein compare
CA265_RS17560 +0.5 3.4 peptidylprolyl isomerase compare
CA265_RS09900 +0.5 2.8 TetR family transcriptional regulator compare
CA265_RS12330 +0.5 1.3 response regulator compare
CA265_RS18090 +0.5 4.5 gliding motility protein compare
CA265_RS08315 +0.5 0.9 tRNA-Lys compare
CA265_RS12600 +0.5 1.4 hypothetical protein compare
CA265_RS22010 +0.5 1.4 hypothetical protein compare
CA265_RS16585 +0.5 2.4 hypothetical protein compare
CA265_RS22905 +0.5 2.0 GTPase HflX compare
CA265_RS08320 +0.5 2.7 DNA mismatch repair protein MutT compare
CA265_RS04040 +0.5 1.4 hypothetical protein compare
CA265_RS22040 +0.5 1.9 hypothetical protein compare
CA265_RS10040 +0.5 1.1 hypothetical protein compare
CA265_RS12320 +0.5 1.9 hypothetical protein compare
CA265_RS08855 +0.5 3.5 MFS transporter compare
CA265_RS12780 +0.5 1.1 hypothetical protein compare
CA265_RS09010 +0.5 2.1 3-phosphoglycerate dehydrogenase compare
CA265_RS14910 +0.5 3.2 ABC transporter ATP-binding protein compare
CA265_RS17750 +0.5 3.4 hypothetical protein compare
CA265_RS18535 +0.5 2.1 four helix bundle protein compare
CA265_RS18445 +0.5 2.9 WYL domain-containing protein compare
CA265_RS24625 +0.5 3.5 LacI family transcriptional regulator compare
CA265_RS06115 +0.5 2.9 DNA mismatch repair protein MutT compare
CA265_RS23150 +0.5 3.1 DNA-binding response regulator compare
CA265_RS09120 +0.5 3.5 hypothetical protein compare
CA265_RS16205 +0.5 2.6 transcriptional regulator compare
CA265_RS25355 +0.5 2.3 DUF2807 domain-containing protein compare
CA265_RS02655 +0.5 2.0 hypothetical protein compare
CA265_RS19535 +0.5 3.1 hypothetical protein compare
CA265_RS04325 +0.5 2.2 hypothetical protein compare
CA265_RS10000 +0.5 1.4 nitrite reductase small subunit compare
CA265_RS15035 +0.5 1.9 prevent-host-death protein compare
CA265_RS20610 +0.5 0.8 hypothetical protein compare
CA265_RS16380 +0.5 3.3 efflux transporter periplasmic adaptor subunit compare
CA265_RS21295 +0.5 2.0 hypothetical protein compare
CA265_RS21280 +0.5 3.8 hypothetical protein compare
CA265_RS18500 +0.5 2.2 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
CA265_RS20380 +0.5 2.7 hemagglutinin compare
CA265_RS25375 +0.5 2.2 hypothetical protein compare
CA265_RS25030 +0.5 1.4 hypothetical protein compare
CA265_RS25200 +0.4 2.8 hypothetical protein compare
CA265_RS02840 +0.4 2.1 30S ribosomal protein S30 compare
CA265_RS04725 +0.4 1.9 SIGNAL peptide protein compare
CA265_RS24040 +0.4 1.3 seryl-tRNA synthetase compare
CA265_RS01100 +0.4 2.9 transcriptional regulator compare
CA265_RS21260 +0.4 3.3 hypothetical protein compare
CA265_RS19970 +0.4 2.0 cyclic nucleotide-binding protein compare
CA265_RS08085 +0.4 3.0 aminodeoxychorismate lyase compare
CA265_RS23120 +0.4 1.7 hypothetical protein compare
CA265_RS25060 +0.4 1.5 hypothetical protein compare
CA265_RS00265 +0.4 2.1 RNA polymerase sigma-70 factor compare
CA265_RS02110 +0.4 1.1 hypothetical protein compare
CA265_RS08635 +0.4 1.8 damage-inducible protein DinB compare
CA265_RS07590 +0.4 1.5 hypothetical protein compare
CA265_RS22620 +0.4 1.6 hypothetical protein compare
CA265_RS21910 +0.4 3.3 glycoside hydrolase compare
CA265_RS12665 +0.4 0.8 cold-shock protein compare
CA265_RS10545 +0.4 1.1 hypothetical protein compare
CA265_RS16550 +0.4 1.5 acyl carrier protein compare
CA265_RS00675 +0.4 1.9 hypothetical protein compare
CA265_RS17760 +0.4 3.3 hypothetical protein compare
CA265_RS02740 +0.4 2.9 radical SAM protein compare
CA265_RS03525 +0.4 1.8 hypothetical protein compare
CA265_RS21265 +0.4 2.7 hypothetical protein compare
CA265_RS14360 +0.4 1.7 preprotein translocase subunit SecA compare
CA265_RS01265 +0.4 2.0 GntR family transcriptional regulator compare
CA265_RS21760 +0.4 1.5 hypothetical protein compare
CA265_RS19400 +0.4 2.7 hypothetical protein compare
CA265_RS20815 +0.4 1.4 hypothetical protein compare
CA265_RS02125 +0.4 2.3 hypothetical protein compare
CA265_RS24355 +0.4 1.4 transcriptional regulator compare
CA265_RS23820 +0.4 0.9 hypothetical protein compare
CA265_RS16100 +0.4 2.6 serine/threonine protein kinase compare
CA265_RS19820 +0.4 2.3 LacI family transcriptional regulator compare
CA265_RS17765 +0.4 3.4 SusC/RagA family protein compare
CA265_RS20640 +0.4 2.0 hypothetical protein compare
CA265_RS06320 +0.4 2.8 hypothetical protein compare
CA265_RS09720 +0.4 2.6 transglycosylase compare
CA265_RS21905 +0.4 1.8 hypothetical protein compare
CA265_RS01685 +0.4 2.4 hypothetical protein compare
CA265_RS24385 +0.4 1.3 GNAT family N-acetyltransferase compare
CA265_RS07885 +0.4 1.5 response regulator compare
CA265_RS02735 +0.4 2.2 diacylglyceryl transferase compare
CA265_RS16595 +0.4 2.6 hypothetical protein compare
CA265_RS08770 +0.4 1.5 hypothetical protein compare
CA265_RS20085 +0.4 2.1 peptidase M28 compare
CA265_RS23985 +0.4 2.6 gliding motility lipoprotein GldB compare
CA265_RS19345 +0.4 2.4 hypothetical protein compare
CA265_RS21105 +0.4 2.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase compare
CA265_RS19505 +0.4 2.2 GxxExxY protein compare
CA265_RS08995 +0.4 2.9 TonB-dependent receptor compare
CA265_RS14630 +0.4 2.6 AraC family transcriptional regulator compare
CA265_RS23480 +0.4 1.6 hypothetical protein compare
CA265_RS23405 +0.4 2.2 GNAT family N-acetyltransferase compare
CA265_RS02955 +0.4 2.7 G-D-S-L family lipolytic protein compare
CA265_RS22990 +0.4 2.2 hypothetical protein compare
CA265_RS14615 +0.4 1.4 hypothetical protein compare
CA265_RS19055 +0.4 2.3 nitronate monooxygenase compare
CA265_RS24965 +0.4 1.7 hypothetical protein compare
CA265_RS05935 +0.4 2.6 aminoglycoside phosphotransferase compare
CA265_RS03530 +0.4 1.5 hypothetical protein compare
CA265_RS10480 +0.4 1.7 hypothetical protein compare
CA265_RS21285 +0.4 2.4 DNA-binding response regulator compare
CA265_RS14925 +0.4 1.2 hypothetical protein compare
CA265_RS01725 +0.4 2.8 hypothetical protein compare
CA265_RS09920 +0.4 1.5 protein tyrosine phosphatase compare
CA265_RS10705 +0.4 2.7 peptidase M16 compare
CA265_RS16480 +0.4 2.3 hypothetical protein compare
CA265_RS05720 +0.4 1.9 hypothetical protein compare
CA265_RS22920 +0.4 2.1 peptidase M23 compare
CA265_RS21250 +0.4 2.6 thioredoxin compare
CA265_RS20655 +0.4 2.0 transcriptional regulator compare
CA265_RS17420 +0.4 1.3 glyoxalase compare
CA265_RS19965 +0.4 1.6 hypothetical protein compare
CA265_RS22930 +0.4 2.5 hypothetical protein compare
CA265_RS01465 +0.4 2.0 hypothetical protein compare
CA265_RS05065 +0.4 2.2 hypothetical protein compare
CA265_RS02230 +0.3 1.8 hypothetical protein compare
CA265_RS05185 +0.3 2.3 hypothetical protein compare
CA265_RS16940 +0.3 1.5 plasmid stabilization system protein compare
CA265_RS06560 +0.3 1.8 hypothetical protein compare
CA265_RS24675 +0.3 1.6 RNA polymerase compare
CA265_RS14845 +0.3 2.5 transcriptional regulator compare
CA265_RS01210 +0.3 2.5 LuxR family transcriptional regulator compare
CA265_RS23670 +0.3 2.3 cyclic nucleotide-binding protein compare
CA265_RS11275 +0.3 2.1 alpha-L-fucosidase compare
CA265_RS01070 +0.3 1.9 NUDIX hydrolase compare
CA265_RS06315 +0.3 1.8 uridine kinase compare
CA265_RS19940 +0.3 2.6 hypothetical protein compare
CA265_RS20615 +0.3 2.8 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment

For stress MreB Perturbing Compound A22 in Pedobacter sp. GW460-11-11-14-LB5

For stress MreB Perturbing Compound A22 across organisms