Experiment set2IT034 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Sodium octanoate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_4769 -4.8 -23.6 Acyl-CoA dehydrogenase (EC 1.3.8.7) conserved
Pf6N2E2_634 -3.8 -13.8 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form conserved
Pf6N2E2_4766 -3.2 -11.5 Acyl-CoA dehydrogenase (EC 1.3.8.7) conserved
Pf6N2E2_2879 -3.1 -8.2 membrane protein, putative conserved
Pf6N2E2_2877 -2.6 -8.4 Membrane fusion component of tripartite multidrug resistance system conserved
Pf6N2E2_2878 -2.5 -5.6 required for 4-hydroxybenzoate and octanoate transport, together with MFP and FUSC proteins (Pf6N2E2_2877, Pf6N2E2_2879) (from data) conserved
Pf6N2E2_3637 -2.0 -7.9 yqiA-like hydrolase, affects the cell envelope (from data) conserved
Pf6N2E2_5435 -2.0 -5.1 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf6N2E2_2391 -1.8 -8.2 FIG137360: hypothetical protein conserved
Pf6N2E2_529 -1.6 -5.0 FIG00954439: hypothetical protein compare
Pf6N2E2_2470 -1.5 -6.9 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) conserved
Pf6N2E2_5546 -1.5 -5.5 Queuosine Biosynthesis QueC ATPase compare
Pf6N2E2_5824 -1.3 -5.4 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) conserved
Pf6N2E2_3103 -1.3 -6.5 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) conserved
Pf6N2E2_3891 -1.1 -6.3 Putative formate dehydrogenase oxidoreductase protein conserved
Pf6N2E2_3112 -1.0 -5.2 FIG00953322: hypothetical protein compare
Pf6N2E2_5707 -1.0 -5.9 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate compare


Specific phenotypes for carbon source Sodium octanoate across organisms