Experiment set2IT034 for Pedobacter sp. GW460-11-11-14-LB5

Compare to:

R2A with MreB Perturbing Compound A22 0.02 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA265_RS01960 +1.3 2.1 division/cell wall cluster transcriptional repressor MraZ compare
CA265_RS07230 +0.8 2.2 hypothetical protein compare
CA265_RS09415 +0.8 2.3 hypothetical protein compare
CA265_RS25335 +0.7 1.6 hypothetical protein compare
CA265_RS22010 +0.7 1.8 hypothetical protein compare
CA265_RS03450 +0.7 3.1 hypothetical protein compare
CA265_RS12330 +0.7 1.2 response regulator compare
CA265_RS23675 +0.7 1.5 hypothetical protein compare
CA265_RS19140 +0.6 1.8 tRNA-Ile compare
CA265_RS24955 +0.6 2.1 methyltransferase type 11 compare
CA265_RS23045 +0.6 2.0 cold-shock protein compare
CA265_RS18085 +0.6 2.2 hypothetical protein compare
CA265_RS04325 +0.6 2.3 hypothetical protein compare
CA265_RS12665 +0.5 1.2 cold-shock protein compare
CA265_RS15535 +0.5 1.6 methionine sulfoxide reductase B compare
CA265_RS05260 +0.5 2.1 hypothetical protein compare
CA265_RS01150 +0.5 2.7 hypothetical protein compare
CA265_RS20355 +0.5 2.0 hypothetical protein compare
CA265_RS25305 +0.5 2.7 hypothetical protein compare
CA265_RS20565 +0.5 2.9 metallophosphoesterase compare
CA265_RS14170 +0.5 2.5 DNA repair protein compare
CA265_RS08445 +0.5 1.1 endonuclease compare
CA265_RS01185 +0.5 2.2 hypothetical protein compare
CA265_RS18805 +0.5 1.2 hypothetical protein compare
CA265_RS18530 +0.5 1.7 aspartate aminotransferase family protein compare
CA265_RS08570 +0.5 1.8 dehydratase compare
CA265_RS18260 +0.5 0.9 hypothetical protein compare
CA265_RS23545 +0.5 0.9 NADH dehydrogenase subunit D compare
CA265_RS00395 +0.5 1.8 hypothetical protein compare
CA265_RS25360 +0.5 1.8 phosphoribosyltransferase compare
CA265_RS23485 +0.5 1.6 hypothetical protein compare
CA265_RS04715 +0.5 1.4 VOC family protein compare
CA265_RS24480 +0.5 1.9 hypothetical protein compare
CA265_RS19405 +0.5 2.0 transcriptional regulator compare
CA265_RS20175 +0.5 1.6 thiamine-phosphate diphosphorylase compare
CA265_RS02090 +0.5 2.3 ABC transporter ATP-binding protein compare
CA265_RS16550 +0.4 1.3 acyl carrier protein compare
CA265_RS16105 +0.4 1.4 hypothetical protein compare
CA265_RS06010 +0.4 1.8 hypothetical protein compare
CA265_RS23140 +0.4 2.2 hypothetical protein compare
CA265_RS15195 +0.4 2.5 hypothetical protein compare
CA265_RS04950 +0.4 2.7 hypothetical protein compare
CA265_RS12745 +0.4 1.9 NUDIX hydrolase compare
CA265_RS18465 +0.4 2.4 RNA-splicing ligase RtcB compare
CA265_RS12780 +0.4 0.9 hypothetical protein compare
CA265_RS21320 +0.4 1.7 hypothetical protein compare
CA265_RS23250 +0.4 2.2 hypothetical protein compare
CA265_RS04040 +0.4 1.5 hypothetical protein compare
CA265_RS19785 +0.4 2.6 hypothetical protein compare
CA265_RS09080 +0.4 1.2 thioredoxin compare
CA265_RS21295 +0.4 2.0 hypothetical protein compare
CA265_RS19465 +0.4 2.0 protein tyrosine phosphatase compare
CA265_RS12045 +0.4 2.3 hypothetical protein compare
CA265_RS17310 +0.4 2.2 hypothetical protein compare
CA265_RS17555 +0.4 2.9 hypothetical protein compare
CA265_RS21565 +0.4 0.7 cold-shock protein compare
CA265_RS12800 +0.4 1.8 NAD(P)H-dependent oxidoreductase compare
CA265_RS06885 +0.4 0.7 hypothetical protein compare
CA265_RS17950 +0.4 1.3 hypothetical protein compare
CA265_RS19535 +0.4 2.6 hypothetical protein compare
CA265_RS22945 +0.4 1.5 hypothetical protein compare
CA265_RS02665 +0.4 2.1 hypothetical protein compare
CA265_RS11990 +0.4 1.5 hypothetical protein compare
CA265_RS17115 +0.4 1.2 arsenate reductase compare
CA265_RS24910 +0.4 2.2 GNAT family N-acetyltransferase compare
CA265_RS13225 +0.4 2.7 exonuclease compare
CA265_RS07880 +0.4 2.5 transcriptional regulator compare
CA265_RS25180 +0.4 1.8 hypothetical protein compare
CA265_RS20800 +0.4 1.0 hypothetical protein compare
CA265_RS06595 +0.4 0.7 Arc family DNA binding domain-containing protein compare
CA265_RS02110 +0.4 1.1 hypothetical protein compare
CA265_RS05330 +0.4 0.8 hypothetical protein compare
CA265_RS14125 +0.4 1.1 hypothetical protein compare
CA265_RS18610 +0.4 2.5 aminopeptidase compare
CA265_RS19455 +0.4 2.5 hypothetical protein compare
CA265_RS21115 +0.4 2.1 hypothetical protein compare
CA265_RS22450 +0.4 1.6 GntR family transcriptional regulator compare
CA265_RS02170 +0.4 1.1 hypothetical protein compare
CA265_RS03765 +0.4 1.6 hypothetical protein compare
CA265_RS24770 +0.4 1.3 hypothetical protein compare
CA265_RS02105 +0.4 2.1 hypothetical protein compare
CA265_RS21220 +0.3 2.0 hypothetical protein compare
CA265_RS10435 +0.3 1.3 RNA-binding protein compare
CA265_RS16420 +0.3 2.0 hypothetical protein compare
CA265_RS25345 +0.3 1.8 hypothetical protein compare
CA265_RS20610 +0.3 1.0 hypothetical protein compare
CA265_RS15255 +0.3 2.5 restriction endonuclease subunit S compare
CA265_RS13735 +0.3 1.1 AsnC family transcriptional regulator compare
CA265_RS22500 +0.3 2.0 DUF58 domain-containing protein compare
CA265_RS23355 +0.3 1.9 hypothetical protein compare
CA265_RS21480 +0.3 1.8 GNAT family N-acetyltransferase compare
CA265_RS04725 +0.3 1.6 SIGNAL peptide protein compare
CA265_RS19910 +0.3 1.9 GDSL family lipase compare
CA265_RS25400 +0.3 1.8 fatty acid desaturase compare
CA265_RS23450 +0.3 2.2 aspartate aminotransferase family protein compare
CA265_RS23800 +0.3 1.3 methyltransferase type 12 compare
CA265_RS23265 +0.3 1.1 iron-binding protein compare
CA265_RS23100 +0.3 1.5 hypothetical protein compare
CA265_RS25255 +0.3 2.3 methyltransferase type 11 compare
CA265_RS16615 +0.3 1.1 hypothetical protein compare
CA265_RS14370 +0.3 1.5 hypothetical protein compare
CA265_RS22620 +0.3 0.6 hypothetical protein compare
CA265_RS08775 +0.3 0.5 hypothetical protein compare
CA265_RS14070 +0.3 1.4 hypothetical protein compare
CA265_RS23765 +0.3 2.1 hypothetical protein compare
CA265_RS23505 +0.3 1.2 biopolymer transporter ExbD compare
CA265_RS11480 +0.3 1.0 VOC family protein compare
CA265_RS05495 +0.3 1.8 hypothetical protein compare
CA265_RS09015 +0.3 1.2 hypothetical protein compare
CA265_RS07620 +0.3 1.2 hypothetical protein compare
CA265_RS07840 +0.3 1.4 hypothetical protein compare
CA265_RS20315 +0.3 2.6 hypothetical protein compare
CA265_RS17565 +0.3 1.6 hypothetical protein compare
CA265_RS07610 +0.3 1.2 KTSC domain-containing protein compare
CA265_RS18895 +0.3 2.1 ATPase compare
CA265_RS21620 +0.3 1.9 hybrid sensor histidine kinase/response regulator compare
CA265_RS24025 +0.3 1.2 hypothetical protein compare
CA265_RS05030 +0.3 1.4 GNAT family N-acetyltransferase compare
CA265_RS09705 +0.3 1.0 copper oxidase compare
CA265_RS12825 +0.3 1.9 hypothetical protein compare
CA265_RS23865 +0.3 1.8 DNA mismatch repair protein MutS compare
CA265_RS20320 +0.3 2.8 hypothetical protein compare
CA265_RS04485 +0.3 1.2 hypothetical protein compare
CA265_RS18200 +0.3 1.2 DUF4440 domain-containing protein compare
CA265_RS15760 +0.3 1.8 peroxiredoxin compare
CA265_RS15480 +0.3 2.0 sterol desaturase compare
CA265_RS14260 +0.3 1.7 restriction endonuclease subunit R compare
CA265_RS15030 +0.3 1.3 PIN domain nuclease compare
CA265_RS19080 +0.3 1.3 hypothetical protein compare
CA265_RS17560 +0.3 2.2 peptidylprolyl isomerase compare
CA265_RS20280 +0.3 1.4 DoxX family protein compare
CA265_RS09955 +0.3 1.4 response regulator compare
CA265_RS09320 +0.3 0.8 hypothetical protein compare
CA265_RS11570 +0.3 1.6 hypothetical protein compare
CA265_RS07755 +0.3 0.8 hypothetical protein compare
CA265_RS05620 +0.3 0.6 hypothetical protein compare
CA265_RS19960 +0.3 1.3 hypothetical protein compare
CA265_RS18120 +0.3 2.3 gliding motility protein GldM compare
CA265_RS02245 +0.3 1.8 hypothetical protein compare
CA265_RS15190 +0.3 1.5 RNA polymerase sigma factor compare
CA265_RS08390 +0.3 2.2 dihydrodipicolinate synthase family protein compare
CA265_RS06040 +0.3 1.2 hypothetical protein compare
CA265_RS08470 +0.3 2.0 sialate O-acetylesterase compare
CA265_RS14075 +0.3 1.5 ubiquinol-cytochrome C reductase compare
CA265_RS03205 +0.3 1.5 AraC family transcriptional regulator compare
CA265_RS03815 +0.3 1.9 AraC family transcriptional regulator compare
CA265_RS07785 +0.3 1.6 hypothetical protein compare
CA265_RS04010 +0.3 2.2 hypothetical protein compare
CA265_RS14845 +0.3 1.6 transcriptional regulator compare
CA265_RS21900 +0.3 2.2 two-component sensor histidine kinase compare
CA265_RS17040 +0.3 1.1 hypothetical protein compare
CA265_RS15495 +0.3 1.3 hypothetical protein compare
CA265_RS07885 +0.3 1.9 response regulator compare
CA265_RS24625 +0.3 2.0 LacI family transcriptional regulator compare
CA265_RS23700 +0.3 1.8 hypothetical protein compare
CA265_RS04560 +0.3 0.8 hypothetical protein compare
CA265_RS19040 +0.3 1.1 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
CA265_RS04755 +0.3 1.8 proline hydroxylase compare
CA265_RS07600 +0.3 2.1 phytoene synthase compare
CA265_RS15870 +0.3 0.8 hypothetical protein compare
CA265_RS21130 +0.3 1.6 Co2+/Mg2+ efflux protein ApaG compare
CA265_RS19680 +0.3 1.3 DNA-binding transcriptional regulator OxyR compare
CA265_RS21255 +0.3 2.0 hypothetical protein compare
CA265_RS11125 +0.3 1.5 hypothetical protein compare
CA265_RS15420 +0.3 1.6 hypothetical protein compare
CA265_RS22990 +0.3 1.5 hypothetical protein compare
CA265_RS24995 +0.3 1.3 hypothetical protein compare
CA265_RS18500 +0.3 1.4 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
CA265_RS02840 +0.3 0.9 30S ribosomal protein S30 compare
CA265_RS01200 +0.3 1.3 hypothetical protein compare
CA265_RS06865 +0.3 1.5 hypothetical protein compare
CA265_RS21835 +0.3 0.9 hypothetical protein compare
CA265_RS24445 +0.3 1.2 hypothetical protein compare
CA265_RS22905 +0.3 1.1 GTPase HflX compare
CA265_RS13525 +0.3 1.3 metallophosphoesterase compare
CA265_RS04785 +0.3 1.5 hypothetical protein compare
CA265_RS00640 +0.3 1.3 hypothetical protein compare
CA265_RS19440 +0.3 1.5 HupE / UreJ protein compare
CA265_RS01100 +0.3 1.6 transcriptional regulator compare
CA265_RS20950 +0.3 1.4 hypothetical protein compare
CA265_RS05055 +0.3 1.6 hypothetical protein compare
CA265_RS10170 +0.3 0.9 hypothetical protein compare
CA265_RS04140 +0.3 2.0 glycogen synthase compare
CA265_RS25315 +0.3 1.4 phytoene dehydrogenase compare
CA265_RS15705 +0.3 1.6 acyl-CoA thioesterase compare
CA265_RS17095 +0.3 1.3 SAM-dependent methyltransferase compare
CA265_RS23755 +0.3 1.8 lauroyl acyltransferase compare
CA265_RS24970 +0.3 1.3 AAA family ATPase compare
CA265_RS14480 +0.3 1.0 hypothetical protein compare
CA265_RS14085 +0.3 1.3 hypothetical protein compare
CA265_RS08920 +0.3 1.3 hypothetical protein compare
CA265_RS09110 +0.3 1.8 hypothetical protein compare
CA265_RS20020 +0.3 1.6 N-acetylmuramoyl-L-alanine amidase compare
CA265_RS00380 +0.3 1.2 hypothetical protein compare
CA265_RS25410 +0.3 1.5 gluconate kinase compare
CA265_RS21240 +0.3 1.7 hypothetical protein compare
CA265_RS24355 +0.3 0.7 transcriptional regulator compare
CA265_RS08320 +0.3 1.5 DNA mismatch repair protein MutT compare
CA265_RS18265 +0.3 1.4 hypothetical protein compare
CA265_RS06675 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pedobacter sp. GW460-11-11-14-LB5 in stress experiments

For stress MreB Perturbing Compound A22 across organisms