Experiment set2IT033 for Azospirillum brasilense Sp245

Compare to:

Ammonium chloride nitrogen source

200 most important genes:

  gene name fitness t score description  
AZOBR_RS03545 -6.9 -4.8 isopropylmalate isomerase compare
AZOBR_RS01670 -6.5 -3.1 imidazole glycerol phosphate synthase compare
AZOBR_RS03855 -6.3 -9.6 prephenate dehydratase compare
AZOBR_RS04335 -6.1 -4.2 phosphoribosylformylglycinamidine synthase compare
AZOBR_RS01665 -5.8 -8.4 imidazoleglycerol-phosphate dehydratase compare
AZOBR_RS12155 -5.7 -8.6 2-isopropylmalate synthase compare
AZOBR_RS20485 -5.5 -12.8 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) compare
AZOBR_RS19500 -5.4 -6.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AZOBR_RS01690 -5.2 -12.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AZOBR_RS01680 -5.0 -6.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AZOBR_RS00525 -5.0 -4.4 tryptophan synthase subunit beta compare
AZOBR_RS03845 -5.0 -10.6 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (from data) compare
AZOBR_RS07450 -5.0 -3.4 indole-3-glycerol-phosphate synthase compare
AZOBR_RS10140 -4.9 -4.4 siroheme synthase compare
AZOBR_RS09540 -4.8 -3.0 5 10-methylenetetrahydrofolate reductase compare
AZOBR_RS31135 -4.8 -5.7 pyruvate phosphate dikinase compare
AZOBR_RS09435 -4.8 -5.3 3'-5'-bisphosphate nucleotidase compare
AZOBR_RS02140 -4.7 -11.5 O-succinylhomoserine sulfhydrylase compare
AZOBR_RS01685 -4.6 -6.0 imidazole glycerol phosphate synthase compare
AZOBR_RS10130 -4.4 -1.6 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
AZOBR_RS10125 -4.2 -11.0 sulfite reductase compare
AZOBR_RS14135 -4.0 -2.2 isopropylmalate isomerase compare
AZOBR_RS09535 -4.0 -11.4 ArsR family transcriptional regulator compare
AZOBR_RS16290 -3.9 -3.0 phosphoribosylaminoimidazole synthetase compare
AZOBR_RS00520 -3.7 -7.0 tryptophan synthase subunit alpha compare
AZOBR_RS10685 -3.7 -2.2 ATP phosphoribosyltransferase compare
AZOBR_RS04460 -3.5 -4.9 dihydroorotase compare
AZOBR_RS25120 -3.5 -18.8 4Fe-4S ferredoxin compare
AZOBR_RS10155 -3.5 -12.9 NodQ bifunctional enzyme compare
AZOBR_RS04370 -3.1 -8.8 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
AZOBR_RS13520 -3.1 -3.6 dihydroorotate dehydrogenase compare
AZOBR_RS07455 -3.0 -1.9 anthranilate phosphoribosyltransferase compare
AZOBR_RS14130 -3.0 -6.5 3-isopropylmalate dehydrogenase compare
AZOBR_RS33395 -2.9 -8.1 NAD-dependent dehydratase compare
AZOBR_RS10150 -2.8 -5.9 sulfate adenylyltransferase compare
AZOBR_RS08310 -2.8 -3.6 amidophosphoribosyltransferase compare
AZOBR_RS33465 -2.7 -3.6 GDP-mannose 4 6-dehydratase compare
AZOBR_RS00325 -2.5 -4.3 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS00860 -2.5 -2.3 elongation factor 4 compare
AZOBR_RS05080 -2.4 -2.2 orotate phosphoribosyltransferase compare
AZOBR_RS30095 -2.4 -1.7 hypothetical protein compare
AZOBR_RS07940 -2.4 -9.0 phosphomethylpyrimidine synthase compare
AZOBR_RS16295 -2.3 -1.6 phosphoribosylglycinamide formyltransferase compare
AZOBR_RS06425 -2.3 -7.4 NAD(P) transhydrogenase subunit alpha compare
AZOBR_RS10315 -2.2 -4.6 fumarate hydratase compare
AZOBR_RS16235 -2.2 -7.0 polyphosphate kinase compare
AZOBR_RS30205 -2.2 -2.2 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase compare
AZOBR_RS08650 -2.2 -4.6 cystathionine beta-lyase compare
AZOBR_RS00025 -2.2 -3.5 TPP compare
AZOBR_RS33830 -2.1 -9.1 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS01810 -2.1 -3.5 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AZOBR_RS02815 -2.1 -1.6 hypothetical protein compare
AZOBR_RS09225 -2.0 -4.5 membrane protein compare
AZOBR_RS25125 -2.0 -7.2 L-lactate permease compare
AZOBR_RS06435 -2.0 -3.4 NAD synthetase compare
AZOBR_RS20575 -2.0 -2.1 aspartate carbamoyltransferase compare
AZOBR_RS05340 -2.0 -1.4 septum site-determining protein MinC compare
AZOBR_RS15055 -2.0 -2.6 muraminidase compare
AZOBR_RS06560 -2.0 -2.9 acetolactate synthase compare
AZOBR_RS19515 -2.0 -6.2 ArsC family transcriptional regulator compare
AZOBR_RS05770 -1.9 -9.4 2-hydroxyacid dehydrogenase compare
AZOBR_RS03155 -1.9 -5.9 iron ABC transporter permease compare
AZOBR_RS20045 -1.9 -1.7 flavin reductase compare
AZOBR_RS15495 -1.7 -1.6 ABC transporter ATPase compare
AZOBR_RS09455 -1.7 -4.2 glycogen branching protein compare
AZOBR_RS03190 -1.7 -2.9 aerobic cobaltochelatase subunit CobS compare
AZOBR_RS03165 -1.6 -7.2 iron deficiency-induced protein A compare
AZOBR_RS06725 -1.6 -2.4 diguanylate phosphodiesterase compare
AZOBR_RS03135 -1.6 -1.2 orotidine 5'-phosphate decarboxylase compare
AZOBR_RS01850 -1.5 -0.7 hypothetical protein compare
AZOBR_RS11095 -1.5 -1.9 recombinase RecA compare
AZOBR_RS01775 -1.5 -2.8 DNA polymerase III subunit epsilon compare
AZOBR_RS22000 -1.5 -1.3 heat-shock protein Hsp20 compare
AZOBR_RS10505 -1.5 -3.1 ribonuclease H compare
AZOBR_RS03395 -1.5 -1.5 Crp/Fnr family transcriptional regulator compare
AZOBR_RS07620 -1.5 -1.5 esterase compare
AZOBR_RS13845 -1.5 -1.4 hypothetical protein compare
AZOBR_RS15395 -1.4 -1.5 phytoene synthase compare
AZOBR_RS33315 -1.4 -3.4 hypothetical protein compare
AZOBR_RS11360 -1.4 -1.8 transcriptional regulator compare
AZOBR_RS19535 -1.3 -1.1 septum formation protein Maf compare
AZOBR_RS28865 -1.3 -2.3 hypothetical protein compare
AZOBR_RS13765 -1.3 -5.1 hypothetical protein compare
AZOBR_RS17140 -1.3 -1.9 putative low-affinity phosphate transport accessory protein compare
AZOBR_RS16775 -1.3 -4.3 hypothetical protein compare
AZOBR_RS11105 -1.3 -2.0 histidine kinase compare
AZOBR_RS01345 -1.2 -2.6 Fur family transcriptional regulator compare
AZOBR_RS19035 -1.2 -2.3 molecular chaperone Hsp33 compare
AZOBR_RS07970 -1.2 -1.4 thiamine-phosphate pyrophosphorylase compare
AZOBR_RS17145 -1.2 -1.8 inorganic phosphate transporter compare
AZOBR_RS15535 -1.2 -0.8 heme biosynthesis protein HemY compare
AZOBR_RS26630 -1.2 -1.5 ABC transporter permease compare
AZOBR_RS04935 -1.2 -1.4 hypothetical protein compare
AZOBR_RS10235 -1.2 -2.0 cobalamin biosynthesis protein CobD compare
AZOBR_RS11025 -1.2 -3.2 isocitrate dehydrogenase compare
AZOBR_RS13590 -1.1 -4.3 hypothetical protein compare
AZOBR_RS04600 -1.1 -1.2 phosphate acetyltransferase compare
AZOBR_RS25870 -1.1 -1.8 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS01805 -1.1 -1.3 tRNA modification GTPase TrmE compare
AZOBR_RS06515 -1.1 -0.8 sodium:proton antiporter compare
AZOBR_RS09195 -1.1 -1.7 histidine kinase compare
AZOBR_RS28925 -1.1 -1.1 hypothetical protein compare
AZOBR_RS15025 -1.1 -1.1 hypothetical protein compare
AZOBR_RS08630 -1.1 -1.2 putative NADH-ubiquinone oxidoreductase compare
AZOBR_RS07130 -1.1 -2.6 trigger factor compare
AZOBR_RS00550 -1.1 -1.1 histidine kinase compare
AZOBR_RS12270 -1.1 -2.5 N-acetylmuramoyl-L-alanine amidase compare
AZOBR_RS20300 -1.1 -1.3 ribonuclease HII compare
AZOBR_RS02180 -1.1 -2.1 hypothetical protein compare
AZOBR_RS14450 -1.0 -3.0 potassium transporter TrkA compare
AZOBR_RS01755 -1.0 -3.1 hypothetical protein compare
AZOBR_RS06370 -1.0 -1.4 hypothetical protein compare
AZOBR_RS09035 -1.0 -0.9 transcriptional regulator compare
AZOBR_RS08320 -1.0 -4.0 DNA repair protein RadA compare
AZOBR_RS31830 -1.0 -2.2 hypothetical protein compare
AZOBR_RS02200 -1.0 -2.8 nucleoside-triphosphate diphosphatase compare
AZOBR_RS20000 -1.0 -0.9 DNA repair protein RecO compare
AZOBR_RS01040 -1.0 -1.0 manganese transporter compare
AZOBR_RS13525 -1.0 -1.0 glutathione S-transferase compare
AZOBR_RS19685 -1.0 -2.2 hypothetical protein compare
AZOBR_RS33470 -1.0 -1.8 sugar ABC transporter permease compare
AZOBR_RS14695 -0.9 -1.4 DctQ (C4-dicarboxylate permease small subunit) compare
AZOBR_RS15015 -0.9 -0.9 dihydroxy-acid dehydratase compare
AZOBR_RS20510 -0.9 -3.6 alkyl hydroperoxide reductase subunit C compare
AZOBR_RS09930 -0.9 -2.1 membrane protein compare
AZOBR_RS32815 -0.9 -1.3 hypothetical protein compare
AZOBR_RS33565 -0.9 -3.2 UDP-N-acetyl-D-galactosamine dehydrogenase compare
AZOBR_RS06905 -0.9 -4.0 pseudouridine synthase compare
AZOBR_RS18975 -0.9 -2.1 conserved exported protein of unknown function compare
AZOBR_RS33755 -0.9 -0.8 D-glycero-D-manno-heptose 1 7-bisphosphate phosphatase compare
AZOBR_RS26380 -0.9 -0.8 GntR family transcriptional regulator compare
AZOBR_RS24465 -0.9 -1.2 beta-lactamase compare
AZOBR_RS32320 -0.9 -2.6 LacI family transcriptional regulator compare
AZOBR_RS33820 -0.9 -5.0 hypothetical protein compare
AZOBR_RS03240 -0.9 -0.5 recombinase XerD compare
AZOBR_RS13705 -0.9 -5.6 hypothetical protein compare
AZOBR_RS28700 -0.9 -1.8 hypothetical protein compare
AZOBR_RS18345 -0.9 -1.6 chemotaxis protein compare
AZOBR_RS01135 -0.8 -1.0 alkaline phosphatase compare
AZOBR_RS01740 -0.8 -1.0 AbrB family transcriptional regulator compare
AZOBR_RS09185 -0.8 -2.1 hypothetical protein compare
AZOBR_RS32505 -0.8 -1.2 hypothetical protein compare
AZOBR_RS19465 -0.8 -1.0 dioxygenase compare
AZOBR_RS14430 -0.8 -1.6 chemotaxis protein CheY compare
AZOBR_RS21100 -0.8 -2.7 methylmalonyl-CoA carboxyltransferase compare
AZOBR_RS15935 -0.8 -2.0 tRNA-dihydrouridine synthase A compare
AZOBR_RS01720 -0.8 -2.3 preprotein translocase subunit SecB compare
AZOBR_RS10580 -0.8 -4.0 protoheme IX farnesyltransferase compare
AZOBR_RS10335 -0.8 -1.0 acyltransferase compare
AZOBR_RS14715 -0.8 -1.5 hypothetical protein compare
AZOBR_RS29380 -0.8 -1.5 ATPase AAA compare
AZOBR_RS32170 -0.8 -1.8 hypothetical protein compare
AZOBR_RS13585 -0.8 -3.2 hypothetical protein compare
AZOBR_RS07810 -0.8 -6.2 poly(3-hydroxyalkanoate) synthetase compare
AZOBR_RS16730 -0.8 -2.6 uroporphyrin-III methyltransferase compare
AZOBR_RS01635 -0.7 -0.8 XRE family transcriptional regulator compare
AZOBR_RS10945 -0.7 -1.0 arsenate reductase compare
AZOBR_RS33460 -0.7 -2.8 glycosyl transferase group 1 compare
AZOBR_RS01180 -0.7 -1.0 peptidase S41 compare
AZOBR_RS15380 -0.7 -1.1 hypothetical protein compare
AZOBR_RS33825 -0.7 -2.9 hypothetical protein compare
AZOBR_RS07920 -0.7 -0.6 NAD synthetase compare
AZOBR_RS04400 -0.7 -2.1 DNA repair protein RadC compare
AZOBR_RS01900 -0.7 -0.7 membrane protein compare
AZOBR_RS23800 -0.7 -2.1 2-keto-4-methylthiobutyrate aminotransferase compare
AZOBR_RS13505 -0.7 -3.0 translation initiation factor IF-3 compare
AZOBR_RS28715 -0.7 -4.0 hypothetical protein compare
AZOBR_RS02170 -0.7 -3.4 glutathione synthetase compare
AZOBR_RS22295 -0.7 -0.9 methylcrotonoyl-CoA carboxylase compare
AZOBR_RS19985 -0.7 -2.1 hypothetical protein compare
AZOBR_RS11605 -0.7 -1.1 hypothetical protein compare
AZOBR_RS02875 -0.7 -1.1 RNA helicase compare
AZOBR_RS30930 -0.7 -1.1 hypothetical protein compare
AZOBR_RS11585 -0.7 -1.6 hypothetical protein compare
AZOBR_RS20880 -0.7 -3.4 ethyl tert-butyl ether degradation protein EthD compare
AZOBR_RS10355 -0.7 -1.3 membrane protein compare
AZOBR_RS01130 -0.7 -2.6 phosphate ABC transporter substrate-binding protein compare
AZOBR_RS00585 -0.7 -2.6 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS07145 -0.7 -1.7 peptidase compare
AZOBR_RS33855 -0.7 -3.6 hypothetical protein compare
AZOBR_RS32385 -0.7 -2.0 FAD-dependent oxidoreductase compare
AZOBR_RS31065 -0.7 -0.7 hypothetical protein compare
AZOBR_RS13600 -0.7 -4.1 hypothetical protein compare
AZOBR_RS21175 -0.7 -1.2 hypothetical protein compare
AZOBR_RS20235 -0.7 -3.4 transcriptional regulator compare
AZOBR_RS22030 -0.7 -2.2 hypothetical protein compare
AZOBR_RS32985 -0.7 -2.7 type I secretion protein compare
AZOBR_RS01675 -0.7 -1.3 acetyltransferase compare
AZOBR_RS33935 -0.7 -4.0 hypothetical protein compare
AZOBR_RS19435 -0.7 -0.7 hypothetical protein compare
AZOBR_RS21705 -0.7 -1.5 2-aminobenzoate-CoA ligase compare
AZOBR_RS13670 -0.7 -2.6 hypothetical protein compare
AZOBR_RS13595 -0.7 -3.7 hypothetical protein compare
AZOBR_RS09805 -0.6 -1.1 peptide chain release factor I compare
AZOBR_RS29895 -0.6 -0.8 hypothetical protein compare
AZOBR_RS29080 -0.6 -0.5 hypothetical protein compare
AZOBR_RS22050 -0.6 -0.6 histidine triad (HIT) protein compare
AZOBR_RS09735 -0.6 -3.4 MFS transporter permease compare
AZOBR_RS08205 -0.6 -1.4 glycosyl transferase compare
AZOBR_RS25745 -0.6 -0.8 conserved exported protein of unknown function compare


Specific Phenotypes

None in this experiment

For Azospirillum brasilense Sp245 in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms