Experiment set2IT028 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamine carbon source

200 most important genes:

  gene name fitness t score description  
AO353_20695 -4.4 -5.2 O-succinylhomoserine sulfhydrylase compare
AO353_05115 -4.2 -7.6 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20625 -4.2 -2.9 3-isopropylmalate dehydratase compare
AO353_07220 -4.1 -6.9 anthranilate synthase compare
AO353_20540 -4.1 -7.3 aromatic amino acid aminotransferase compare
AO353_12085 -4.0 -6.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_13070 -4.0 -7.6 phosphoserine phosphatase compare
AO353_12070 -3.9 -6.6 imidazoleglycerol-phosphate dehydratase compare
AO353_20665 -3.9 -10.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_08185 -3.8 -8.6 methionine biosynthesis protein MetW compare
AO353_02075 -3.8 -8.5 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_02070 -3.8 -5.8 prephenate dehydratase compare
AO353_07210 -3.7 -5.1 indole-3-glycerol-phosphate synthase compare
AO353_07230 -3.6 -15.4 anthranilate synthase compare
AO353_08685 -3.6 -7.6 N-acetylglutamate synthase compare
AO353_14505 -3.5 -11.6 ketol-acid reductoisomerase compare
AO353_08180 -3.5 -12.2 homoserine O-acetyltransferase compare
AO353_08345 -3.5 -8.6 dihydroxy-acid dehydratase compare
AO353_08475 -3.4 -8.8 phosphoserine phosphatase compare
AO353_19060 -3.4 -4.6 CysB family transcriptional regulator compare
AO353_00430 -3.4 -2.4 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_12090 -3.4 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
AO353_26790 -3.4 -9.2 Glutaminase (EC 3.5.1.2) (from data) conserved
AO353_20635 -3.4 -11.9 3-isopropylmalate dehydrogenase compare
AO353_10670 -3.4 -8.3 shikimate dehydrogenase compare
AO353_10710 -3.3 -4.0 tryptophan synthase subunit beta compare
AO353_14400 -3.2 -4.3 Fis family transcriptional regulator compare
AO353_05110 -3.1 -11.0 histidinol dehydrogenase compare
AO353_12365 -3.1 -5.1 phosphoribosyl-AMP cyclohydrolase compare
AO353_12075 -3.1 -8.4 imidazole glycerol phosphate synthase subunit HisH compare
AO353_15925 -3.1 -13.6 2-isopropylmalate synthase compare
AO353_04105 -3.0 -7.5 argininosuccinate synthase compare
AO353_20620 -3.0 -7.2 isopropylmalate isomerase compare
AO353_04155 -3.0 -12.1 ornithine carbamoyltransferase compare
AO353_13165 -3.0 -6.5 ATP phosphoribosyltransferase regulatory subunit compare
AO353_07155 -2.9 -7.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_22800 -2.9 -3.8 sulfite reductase compare
AO353_12460 -2.9 -8.4 malate dehydrogenase compare
AO353_14500 -2.9 -6.8 acetolactate synthase 3 regulatory subunit compare
AO353_08165 -2.8 -2.7 pyrroline-5-carboxylate reductase compare
AO353_12360 -2.7 -9.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_09285 -2.7 -11.3 reactive intermediate/imine deaminase compare
AO353_14495 -2.7 -11.2 acetolactate synthase 3 catalytic subunit compare
AO353_11775 -2.7 -7.8 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_08015 -2.7 -7.2 5,10-methylenetetrahydrofolate reductase compare
AO353_03795 -2.6 -5.1 fumarate hydratase compare
AO353_05080 -2.6 -11.5 sulfate adenylyltransferase compare
AO353_16940 -2.6 -5.4 deoxycytidine triphosphate deaminase compare
AO353_14370 -2.5 -7.1 glucose-6-phosphate isomerase compare
AO353_08780 -2.5 -8.5 5-formyltetrahydrofolate cyclo-ligase compare
AO353_09000 -2.5 -5.5 argininosuccinate lyase compare
AO353_00650 -2.4 -3.6 cytochrome biogenesis protein compare
AO353_02685 -2.4 -4.5 phosphoribosylglycinamide formyltransferase compare
AO353_09955 -2.4 -14.4 sodium:alanine symporter conserved
AO353_09240 -2.4 -3.6 acetylglutamate kinase compare
AO353_02250 -2.4 -4.9 chorismate synthase compare
AO353_08510 -2.3 -5.8 3-phosphoglycerate dehydrogenase compare
AO353_07215 -2.3 -7.7 anthranilate phosphoribosyltransferase compare
AO353_09945 -2.2 -5.3 LysR family transcriptional regulator compare
AO353_05075 -2.2 -10.1 adenylylsulfate kinase compare
AO353_02975 -2.2 -3.6 aspartate kinase compare
AO353_27650 -2.2 -5.1 cell division protein FtsK compare
AO353_12115 -2.2 -2.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_05105 -2.2 -10.1 histidinol-phosphate aminotransferase compare
AO353_14115 -2.1 -7.0 gamma-glutamyl kinase compare
AO353_06495 -2.1 -6.0 gamma-glutamyl phosphate reductase compare
AO353_12500 -2.1 -2.0 shikimate kinase compare
AO353_07355 -2.1 -5.0 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_14150 -2.0 -1.9 peptidylprolyl isomerase compare
AO353_09890 -2.0 -5.4 phosphate ABC transporter ATP-binding protein compare
AO353_24130 -2.0 -3.6 hypothetical protein compare
AO353_20175 -1.9 -3.9 ATP-dependent Clp protease proteolytic subunit compare
AO353_16210 -1.9 -11.7 XRE family transcriptional regulator compare
AO353_14940 -1.9 -3.8 malate:quinone oxidoreductase compare
AO353_07325 -1.9 -2.4 diadenosine tetraphosphatase compare
AO353_00750 -1.8 -3.9 GntR family transcriptional regulator compare
AO353_14595 -1.8 -8.2 carbonate dehydratase compare
AO353_13100 -1.8 -1.7 GTPase RsgA compare
AO353_05130 -1.8 -2.3 anti-anti-sigma factor compare
AO353_10705 -1.7 -4.3 tryptophan synthase subunit alpha compare
AO353_12870 -1.7 -12.0 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
AO353_03365 -1.7 -8.0 transcriptional regulator compare
AO353_16265 -1.7 -5.9 Fis family transcriptional regulator compare
AO353_13390 -1.7 -8.6 N-acylglucosamine 2-epimerase compare
AO353_16280 -1.7 -6.5 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 1 (from data) compare
AO353_01375 -1.6 -5.7 phosphate acyltransferase compare
AO353_10455 -1.6 -2.1 tRNA modification GTPase MnmE compare
AO353_14775 -1.6 -5.5 hypothetical protein compare
AO353_12930 -1.6 -3.9 GlcNAc-PI de-N-acetylase compare
AO353_11770 -1.5 -2.0 molecular chaperone Hsp33 compare
AO353_00865 -1.5 -7.8 phosphoenolpyruvate synthase compare
AO353_21625 -1.5 -2.5 Fe/S biogenesis protein NfuA compare
AO353_16270 -1.5 -10.7 histidine kinase conserved
AO353_06720 -1.4 -2.3 NrdR family transcriptional regulator compare
AO353_16290 -1.4 -8.6 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) compare
AO353_11165 -1.4 -8.0 hypothetical protein compare
AO353_09950 -1.4 -4.4 aspartate ammonia-lyase compare
AO353_02720 -1.4 -5.0 cysteine synthase compare
AO353_00825 -1.4 -3.4 porin compare
AO353_26945 -1.4 -2.3 transcriptional regulator compare
AO353_15250 -1.4 -3.3 cytochrome B compare
AO353_08130 -1.4 -2.3 uracil phosphoribosyltransferase compare
AO353_07075 -1.4 -4.0 elongation factor Tu compare
AO353_04565 -1.4 -4.7 nucleoid-associated protein compare
AO353_15185 -1.4 -4.3 ATPase compare
AO353_28425 -1.4 -3.5 TetR family transcriptional regulator compare
AO353_06040 -1.4 -3.0 exodeoxyribonuclease V subunit alpha compare
AO353_16285 -1.4 -6.8 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) conserved
AO353_13640 -1.4 -4.2 histidine kinase compare
AO353_01410 -1.3 -3.1 ribonuclease E compare
AO353_09720 -1.3 -1.7 hypothetical protein compare
AO353_03585 -1.3 -2.6 ATP-dependent DNA helicase RuvA compare
AO353_06050 -1.3 -5.0 exodeoxyribonuclease V subunit gamma compare
AO353_03580 -1.3 -3.2 ATP-dependent DNA helicase RuvB compare
AO353_10510 -1.3 -1.6 benzoate transporter compare
AO353_10495 -1.2 -2.9 serine hydroxymethyltransferase compare
AO353_24595 -1.2 -2.1 hypothetical protein compare
AO353_00495 -1.2 -2.1 DNA topoisomerase I compare
AO353_21615 -1.2 -7.6 methionine synthase compare
AO353_15900 -1.2 -2.2 GTP-binding protein compare
AO353_23620 -1.2 -2.5 hypothetical protein compare
AO353_08980 -1.2 -2.4 heme biosynthesis operon protein HemX compare
AO353_03020 -1.2 -5.5 arginine N-succinyltransferase compare
AO353_20170 -1.2 -3.5 trigger factor compare
AO353_00460 -1.2 -1.9 TetR family transcriptional regulator compare
AO353_03590 -1.2 -2.7 crossover junction endodeoxyribonuclease RuvC compare
AO353_05140 -1.2 -5.4 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_06415 -1.1 -3.3 hypothetical protein compare
AO353_19360 -1.1 -2.1 peroxiredoxin compare
AO353_15725 -1.1 -3.3 hypothetical protein compare
AO353_13140 -1.1 -4.0 tRNA dimethylallyltransferase compare
AO353_13245 -1.1 -5.8 hypothetical protein compare
AO353_14405 -1.1 -7.0 ATPase compare
AO353_16530 -1.0 -1.8 ribonuclease HII compare
AO353_14975 -1.0 -3.8 hypothetical protein compare
AO353_11530 -1.0 -5.7 diguanylate cyclase compare
AO353_08115 -1.0 -3.8 energy transducer TonB compare
AO353_06045 -1.0 -4.5 exodeoxyribonuclease V subunit beta compare
AO353_20585 -1.0 -2.8 TetR family transcriptional regulator compare
AO353_10430 -1.0 -2.7 chromosome partitioning protein ParB compare
AO353_14420 -1.0 -2.8 molecular chaperone DnaK compare
AO353_13160 -1.0 -1.6 membrane protease HflC compare
AO353_18890 -1.0 -3.4 cytochrome C compare
AO353_16805 -1.0 -3.7 recombinase RecA compare
AO353_02465 -1.0 -2.0 hypothetical protein compare
AO353_05420 -1.0 -1.4 peptide chain release factor 3 compare
AO353_04355 -1.0 -1.3 homoserine dehydrogenase compare
AO353_15905 -1.0 -4.0 outer membrane protein assembly factor BamB compare
AO353_10520 -1.0 -3.9 GntR family transcriptional regulator compare
AO353_15170 -1.0 -2.3 cytochrome D ubiquinol oxidase subunit III compare
AO353_18960 -0.9 -1.8 terminase compare
AO353_08265 -0.9 -3.5 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_09015 -0.9 -2.3 DNA-binding protein compare
AO353_04520 -0.9 -3.2 elongation factor 4 compare
AO353_20095 -0.9 -3.8 histidine kinase compare
AO353_10435 -0.9 -5.4 chromosome partitioning protein compare
AO353_20630 -0.9 -4.8 SAM-dependent methyltransferase compare
AO353_12080 -0.9 -2.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
AO353_12105 -0.9 -3.8 peptidase S41 compare
AO353_12935 -0.9 -2.7 glycosyltransferase compare
AO353_17160 -0.9 -2.0 aspartate-semialdehyde dehydrogenase compare
AO353_01685 -0.9 -1.4 hypothetical protein compare
AO353_09905 -0.9 -5.0 phosphate-binding protein compare
AO353_11730 -0.9 -4.9 glutamate--cysteine ligase compare
AO353_13605 -0.9 -4.2 oxidoreductase compare
AO353_03605 -0.9 -1.1 FmdB family transcriptional regulator compare
AO353_03630 -0.9 -5.9 porin compare
AO353_15050 -0.9 -2.5 nitrate transport permease nrtB compare
AO353_29380 -0.9 -2.9 hypothetical protein compare
AO353_20340 -0.9 -2.5 gamma-carboxygeranoyl-CoA hydratase compare
AO353_08640 -0.9 -2.2 hypothetical protein compare
AO353_20800 -0.9 -1.1 hypothetical protein compare
AO353_02200 -0.8 -2.5 hypothetical protein compare
AO353_07515 -0.8 -1.5 transporter compare
AO353_19145 -0.8 -2.4 protease HtpX compare
AO353_23495 -0.8 -1.8 SAM-dependent methyltransferase compare
AO353_21110 -0.8 -1.7 hypothetical protein compare
AO353_05150 -0.8 -2.9 ABC transporter ATP-binding protein compare
AO353_10950 -0.8 -5.3 thiol:disulfide interchange protein compare
AO353_05800 -0.8 -3.1 hypothetical protein compare
AO353_19090 -0.8 -1.6 MarR family transcriptional regulator compare
AO353_12510 -0.8 -5.5 cell division protein compare
AO353_14740 -0.8 -2.1 GTP-binding protein compare
AO353_04500 -0.8 -1.6 DNA repair protein RecO compare
AO353_04365 -0.8 -3.0 recombinase XerD compare
AO353_00635 -0.8 -2.0 hypothetical protein compare
AO353_18540 -0.8 -1.8 pseudouridine synthase compare
AO353_17035 -0.8 -3.1 hypothetical protein compare
AO353_00620 -0.8 -1.7 cytochrome C oxidase Cbb3 compare
AO353_02005 -0.8 -1.6 hypothetical protein compare
AO353_08880 -0.8 -1.7 exopolyphosphatase compare
AO353_16440 -0.8 -1.9 ArsC family transcriptional regulator compare
AO353_15830 -0.8 -1.3 transcriptional regulator compare
AO353_05135 -0.8 -4.2 toluene tolerance protein compare
AO353_03615 -0.8 -1.8 cold-shock protein compare
AO353_04965 -0.8 -2.6 D-erythro-7,8-dihydroneopterin triphosphate epimerase compare
AO353_07525 -0.8 -5.6 biotin synthase compare
AO353_27535 -0.8 -2.0 3-hydroxybutyryl-CoA dehydrogenase compare
AO353_22735 -0.8 -1.9 hypothetical protein compare
AO353_13155 -0.7 -2.3 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source L-Glutamine in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamine across organisms