Experiment set2IT028 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
AO353_19250 +1.2 3.1 molybdenum cofactor guanylyltransferase compare
AO353_03290 +1.2 2.5 peptide deformylase compare
AO353_12690 +1.2 2.1 acyl carrier protein compare
AO353_09745 +1.1 2.3 hypothetical protein compare
AO353_24340 +1.1 2.8 TetR family transcriptional regulator compare
AO353_19340 +1.1 9.2 amino acid ABC transporter substrate-binding protein compare
AO353_11155 +1.1 9.5 thioesterase compare
AO353_26390 +1.1 2.5 glyoxalase compare
AO353_19335 +1.0 7.1 TetR family transcriptional regulator compare
AO353_10725 +1.0 2.3 dodecin flavoprotein compare
AO353_16615 +1.0 8.2 RNA polymerase sigma factor RpoS compare
AO353_27435 +1.0 1.5 hypothetical protein compare
AO353_26220 +0.9 2.7 hypothetical protein compare
AO353_07445 +0.9 2.0 pyrroloquinoline quinone biosynthesis protein PqqD compare
AO353_08775 +0.8 2.0 cell division protein ZapA compare
AO353_25585 +0.8 2.0 argininosuccinate lyase compare
AO353_14030 +0.8 6.9 ABC transporter ATP-binding protein compare
AO353_27500 +0.8 1.9 hypothetical protein compare
AO353_09660 +0.7 1.9 hypothetical protein compare
AO353_04650 +0.7 1.8 molybdenum cofactor biosynthesis protein MoaE compare
AO353_07270 +0.7 2.4 transcriptional regulator compare
AO353_13660 +0.7 4.7 tRNA-dihydrouridine synthase B compare
AO353_26525 +0.7 1.7 hypothetical protein compare
AO353_22360 +0.7 2.0 ABC transporter ATP-binding protein compare
AO353_11160 +0.7 3.9 GntR family transcriptional regulator compare
AO353_02025 +0.7 5.1 mannose-1-phosphate guanyltransferase compare
AO353_09030 +0.7 1.0 iron donor protein CyaY compare
AO353_27585 +0.7 1.6 DNA repair protein compare
AO353_13920 +0.7 2.2 dihydroxyacetone kinase compare
AO353_14085 +0.6 2.5 hypothetical protein compare
AO353_20425 +0.6 1.6 ArsC family transcriptional regulator compare
AO353_02570 +0.6 2.1 hypothetical protein compare
AO353_20315 +0.6 2.8 cytochrome B compare
AO353_02280 +0.6 1.3 DNA mismatch repair protein MutS compare
AO353_21945 +0.6 2.1 protein nirL compare
AO353_04925 +0.6 2.9 aldolase compare
AO353_08060 +0.6 2.0 hypothetical protein compare
AO353_19040 +0.6 4.0 thioredoxin compare
AO353_00260 +0.6 1.5 hypothetical protein compare
AO353_22215 +0.6 2.0 hypothetical protein compare
AO353_16765 +0.6 1.7 hypothetical protein compare
AO353_23935 +0.6 2.6 hypothetical protein compare
AO353_12790 +0.6 1.5 hypothetical protein compare
AO353_19685 +0.6 1.9 alkylhydroperoxidase compare
AO353_21350 +0.6 2.3 methylmalonate-semialdehyde dehydrogenase compare
AO353_23350 +0.6 1.8 hypothetical protein compare
AO353_02010 +0.5 3.3 glycosyl transferase family 1 compare
AO353_03515 +0.5 1.1 cold-shock protein compare
AO353_00665 +0.5 2.0 adenine phosphoribosyltransferase compare
AO353_04190 +0.5 1.3 glycerol-3-phosphate dehydrogenase compare
AO353_17940 +0.5 1.7 hypothetical protein compare
AO353_09235 +0.5 3.6 phosphoglucomutase compare
AO353_23910 +0.5 1.7 response regulator compare
AO353_11050 +0.5 2.0 hypothetical protein compare
AO353_19490 +0.5 2.2 Fis family transcriptional regulator compare
AO353_00440 +0.5 2.0 hypothetical protein compare
AO353_13085 +0.5 1.8 histidine kinase compare
AO353_27905 +0.5 2.3 N-formylglutamate amidohydrolase compare
AO353_02885 +0.5 1.2 flagellar biosynthesis protein FlgN compare
AO353_03460 +0.5 2.7 3-methyladenine DNA glycosylase 2 compare
AO353_02015 +0.5 3.2 acetyltransferase compare
AO353_21935 +0.5 0.8 nitrite reductase compare
AO353_06355 +0.5 1.7 thiamine-phosphate pyrophosphorylase compare
AO353_15210 +0.5 1.9 Zn-dependent hydrolase compare
AO353_00195 +0.5 1.0 virion morphogenesis protein compare
AO353_16355 +0.5 2.2 TetR family transcriptional regulator compare
AO353_01065 +0.5 3.0 acetyl-CoA acetyltransferase compare
AO353_17525 +0.5 2.3 tRNA-Gly compare
AO353_12535 +0.5 1.8 hypothetical protein compare
AO353_24000 +0.5 1.9 isochorismate synthase compare
AO353_10320 +0.5 1.2 hypothetical protein compare
AO353_09065 +0.5 2.5 hypothetical protein compare
AO353_25450 +0.5 1.3 cyanate hydratase compare
AO353_04240 +0.5 1.0 chemotaxis protein CheW compare
AO353_05550 +0.5 2.6 pseudouridine synthase compare
AO353_08120 +0.5 1.6 hypothetical protein compare
AO353_29195 +0.5 2.0 transposase compare
AO353_09060 +0.5 1.3 hypothetical protein compare
AO353_11190 +0.5 3.8 ABC transporter compare
AO353_18925 +0.5 1.4 ATPase compare
AO353_28640 +0.5 1.7 hypothetical protein compare
AO353_22070 +0.5 2.4 DnrE protein compare
AO353_19020 +0.5 1.3 hypothetical protein compare
AO353_09885 +0.5 1.3 transcriptional regulator PhoU compare
AO353_24740 +0.5 1.6 hypothetical protein compare
AO353_04045 +0.5 2.2 3-ketoacyl-ACP reductase compare
AO353_01435 +0.4 1.4 protein tyrosine phosphatase compare
AO353_13965 +0.4 2.5 large-conductance mechanosensitive channel compare
AO353_27530 +0.4 2.2 acetyl-CoA acetyltransferase compare
AO353_19035 +0.4 2.7 pilus assembly protein PilZ compare
AO353_20865 +0.4 1.1 cold-shock protein compare
AO353_13530 +0.4 1.4 ABC transporter ATP-binding protein compare
AO353_26335 +0.4 1.9 hypothetical protein compare
AO353_22500 +0.4 1.0 hypothetical protein compare
AO353_06540 +0.4 1.2 hypothetical protein compare
AO353_07610 +0.4 1.0 hypothetical protein compare
AO353_11850 +0.4 1.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_05625 +0.4 0.7 transcription elongation factor GreA compare
AO353_11195 +0.4 3.8 hemolysin secretion protein D compare
AO353_21290 +0.4 1.0 hypothetical protein compare
AO353_26100 +0.4 1.1 lysozyme compare
AO353_15825 +0.4 1.5 serine acetyltransferase compare
AO353_16645 +0.4 1.8 hypothetical protein compare
AO353_22375 +0.4 1.6 cytochrome c-550 PedF compare
AO353_00975 +0.4 1.7 hypothetical protein compare
AO353_19085 +0.4 1.4 organic hydroperoxide resistance protein compare
AO353_11185 +0.4 3.4 channel protein TolC compare
AO353_01800 +0.4 2.0 hypothetical protein compare
AO353_07875 +0.4 1.6 hypothetical protein compare
AO353_01055 +0.4 3.6 AraC family transcriptional regulator compare
AO353_21825 +0.4 2.6 GNAT family acetyltransferase compare
AO353_11180 +0.4 3.9 large adhesive protein compare
AO353_12580 +0.4 1.0 type II secretory protein PulK compare
AO353_02345 +0.4 1.5 purine permease compare
AO353_07755 +0.4 2.1 betainyl-CoA thiolase (EC 3.1.2.-) (from data) compare
AO353_08465 +0.4 3.6 phosphoenolpyruvate-protein phosphotransferase compare
AO353_23170 +0.4 1.5 short-chain dehydrogenase compare
AO353_15290 +0.4 2.7 methyltransferase compare
AO353_22810 +0.4 0.8 hypothetical protein compare
AO353_07910 +0.4 1.2 hypothetical protein compare
AO353_01795 +0.4 1.0 hypothetical protein compare
AO353_12670 +0.4 1.3 glycosyl transferase compare
AO353_27460 +0.4 1.4 hypothetical protein compare
AO353_07465 +0.4 1.4 addiction module toxin RelE compare
AO353_19505 +0.4 1.2 FAD-dependent oxidoreductase compare
AO353_25660 +0.4 1.6 ABC transporter substrate-binding protein compare
AO353_23545 +0.4 2.3 NADH oxidase compare
AO353_11920 +0.4 1.4 hypothetical protein compare
AO353_28450 +0.4 1.5 LysR family transcriptional regulator compare
AO353_22675 +0.4 2.2 hypothetical protein compare
AO353_19045 +0.4 2.5 2-dehydropantoate 2-reductase compare
AO353_15000 +0.4 1.4 glycerate dehydrogenase compare
AO353_24135 +0.4 1.5 hypothetical protein compare
AO353_09275 +0.4 1.3 DNA-directed RNA polymerase subunit omega compare
AO353_16250 +0.4 2.0 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
AO353_00235 +0.4 1.2 transcriptional regulator compare
AO353_29165 +0.4 1.2 fructose-bisphosphate aldolase compare
AO353_17515 +0.4 1.9 short-chain dehydrogenase compare
AO353_11340 +0.4 0.8 MarR family transcriptional regulator compare
AO353_19810 +0.4 1.1 filamentous hemagglutinin compare
AO353_21440 +0.4 1.4 hypothetical protein compare
AO353_15930 +0.4 1.6 peptidase M23 compare
AO353_24915 +0.4 0.9 hypothetical protein compare
AO353_03915 +0.4 2.3 LysR family transcriptional regulator compare
AO353_27520 +0.4 1.4 3-demethylubiquinone-9 3-methyltransferase compare
AO353_10780 +0.4 0.5 DNA-binding protein compare
AO353_03005 +0.4 2.1 succinylarginine dihydrolase compare
AO353_07595 +0.4 1.5 transcriptional regulator compare
AO353_15280 +0.4 1.8 hypothetical protein compare
AO353_24255 +0.4 1.3 hypothetical protein compare
AO353_06125 +0.4 1.6 ArsR family transcriptional regulator compare
AO353_10235 +0.4 3.0 glycosyltransferase compare
AO353_09440 +0.4 1.0 type VI secretion protein compare
AO353_20000 +0.4 1.3 phosphoribosyltransferase compare
AO353_06345 +0.4 3.4 histidine kinase compare
AO353_17985 +0.4 1.5 LysR family transcriptional regulator compare
AO353_10225 +0.4 1.8 methyltransferase compare
AO353_13670 +0.4 1.5 ribosomal protein L11 methyltransferase compare
AO353_01000 +0.4 1.9 hypothetical protein compare
AO353_24985 +0.4 1.3 L-seryl-tRNA(Sec) selenium transferase compare
AO353_22255 +0.4 1.9 chloroperoxidase compare
AO353_23875 +0.4 1.5 ketosteroid isomerase compare
AO353_19840 +0.4 1.3 hypothetical protein compare
AO353_17540 +0.4 1.1 helicase compare
AO353_07415 +0.4 2.0 AsnC family transcriptional regulator compare
AO353_19310 +0.4 0.8 enoyl-CoA hydratase compare
AO353_03370 +0.4 1.5 aldose epimerase compare
AO353_00185 +0.3 0.8 phage tail protein compare
AO353_09045 +0.3 1.0 hypothetical protein compare
AO353_11310 +0.3 1.5 aspartyl beta-hydroxylase compare
AO353_00120 +0.3 1.1 DNA-binding protein compare
AO353_07615 +0.3 1.5 hypothetical protein compare
AO353_28245 +0.3 2.1 (2Fe-2S)-binding protein compare
AO353_18700 +0.3 0.8 flagellar biogenesis protein compare
AO353_27890 +0.3 1.8 RpiR family transcriptional regulator compare
AO353_26950 +0.3 1.4 hypothetical protein compare
AO353_09495 +0.3 1.5 hypothetical protein compare
AO353_00455 +0.3 1.1 beta-hexosaminidase compare
AO353_21355 +0.3 1.1 xylose isomerase compare
AO353_04625 +0.3 2.8 ATP-dependent RNA helicase RhlB compare
AO353_13575 +0.3 1.3 hypothetical protein compare
AO353_27440 +0.3 1.4 hypothetical protein compare
AO353_22640 +0.3 2.3 MFS transporter compare
AO353_25855 +0.3 1.8 peptide ABC transporter substrate-binding protein compare
AO353_07535 +0.3 1.6 ModE family transcriptional regulator compare
AO353_08560 +0.3 2.0 spermidine/putrescine ABC transporter permease compare
AO353_02275 +0.3 1.4 hypothetical protein compare
AO353_03195 +0.3 1.4 transcriptional regulator compare
AO353_18755 +0.3 2.0 flagellar biosynthetic protein FliR compare
AO353_25860 +0.3 1.3 peptide ABC transporter compare
AO353_04260 +0.3 2.0 LysR family transcriptional regulator compare
AO353_25355 +0.3 1.0 hypothetical protein compare
AO353_19740 +0.3 1.8 MFS transporter compare
AO353_21950 +0.3 1.7 AsnC family transcriptional regulator compare
AO353_28190 +0.3 2.0 AraC family transcriptional regulator compare
AO353_13580 +0.3 1.0 copper resistance protein CopZ compare
AO353_02785 +0.3 2.5 hypothetical protein compare
AO353_22475 +0.3 1.0 alkaline phosphatase compare
AO353_21540 +0.3 1.0 type VI secretion protein compare
AO353_28870 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source L-Glutamine in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamine across organisms