Experiment set2IT025 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
AO353_20695 -4.5 -4.4 O-succinylhomoserine sulfhydrylase compare
AO353_08185 -4.2 -7.5 methionine biosynthesis protein MetW compare
AO353_13070 -4.1 -7.3 phosphoserine phosphatase compare
AO353_20540 -4.0 -7.2 aromatic amino acid aminotransferase compare
AO353_12365 -3.9 -3.8 phosphoribosyl-AMP cyclohydrolase compare
AO353_07230 -3.9 -13.8 anthranilate synthase compare
AO353_10670 -3.8 -7.3 shikimate dehydrogenase compare
AO353_20665 -3.8 -9.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_05115 -3.8 -9.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_02070 -3.7 -6.2 prephenate dehydratase compare
AO353_22800 -3.7 -2.6 sulfite reductase compare
AO353_14505 -3.7 -10.2 ketol-acid reductoisomerase compare
AO353_12085 -3.7 -7.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_20635 -3.6 -10.4 3-isopropylmalate dehydrogenase compare
AO353_08685 -3.6 -7.3 N-acetylglutamate synthase compare
AO353_13165 -3.5 -5.9 ATP phosphoribosyltransferase regulatory subunit compare
AO353_07220 -3.5 -7.8 anthranilate synthase compare
AO353_08475 -3.5 -8.4 phosphoserine phosphatase compare
AO353_12070 -3.5 -8.4 imidazoleglycerol-phosphate dehydratase compare
AO353_08180 -3.4 -12.6 homoserine O-acetyltransferase compare
AO353_20625 -3.4 -4.5 3-isopropylmalate dehydratase compare
AO353_12090 -3.3 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
AO353_20620 -3.3 -7.3 isopropylmalate isomerase compare
AO353_12075 -3.3 -7.9 imidazole glycerol phosphate synthase subunit HisH compare
AO353_02075 -3.2 -10.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_08345 -3.2 -9.2 dihydroxy-acid dehydratase compare
AO353_00430 -3.2 -3.1 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_14400 -3.2 -3.8 Fis family transcriptional regulator compare
AO353_05110 -3.2 -11.0 histidinol dehydrogenase compare
AO353_04155 -3.1 -11.7 ornithine carbamoyltransferase compare
AO353_10710 -3.1 -4.3 tryptophan synthase subunit beta compare
AO353_07210 -3.1 -6.3 indole-3-glycerol-phosphate synthase compare
AO353_07215 -3.1 -7.7 anthranilate phosphoribosyltransferase compare
AO353_14500 -3.1 -6.5 acetolactate synthase 3 regulatory subunit compare
AO353_12360 -3.0 -8.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_00495 -3.0 -2.8 DNA topoisomerase I compare
AO353_04105 -2.9 -8.1 argininosuccinate synthase compare
AO353_08510 -2.8 -5.3 3-phosphoglycerate dehydrogenase compare
AO353_14495 -2.8 -10.3 acetolactate synthase 3 catalytic subunit compare
AO353_08015 -2.7 -6.9 5,10-methylenetetrahydrofolate reductase compare
AO353_09240 -2.7 -3.1 acetylglutamate kinase compare
AO353_12500 -2.7 -1.8 shikimate kinase compare
AO353_09040 -2.7 -2.5 diaminopimelate epimerase compare
AO353_09285 -2.6 -11.6 reactive intermediate/imine deaminase compare
AO353_12460 -2.6 -8.6 malate dehydrogenase compare
AO353_15925 -2.5 -11.4 2-isopropylmalate synthase compare
AO353_19060 -2.5 -5.2 CysB family transcriptional regulator compare
AO353_11775 -2.4 -7.6 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_05105 -2.4 -10.5 histidinol-phosphate aminotransferase compare
AO353_12115 -2.4 -2.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_07155 -2.4 -7.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_02250 -2.2 -4.6 chorismate synthase compare
AO353_14370 -2.2 -7.1 glucose-6-phosphate isomerase compare
AO353_16940 -2.2 -5.4 deoxycytidine triphosphate deaminase compare
AO353_02685 -2.2 -4.3 phosphoribosylglycinamide formyltransferase compare
AO353_03580 -2.2 -3.8 ATP-dependent DNA helicase RuvB compare
AO353_09000 -2.2 -5.7 argininosuccinate lyase compare
AO353_06495 -2.2 -6.0 gamma-glutamyl phosphate reductase compare
AO353_03795 -2.1 -5.1 fumarate hydratase compare
AO353_08165 -2.1 -3.4 pyrroline-5-carboxylate reductase compare
AO353_11750 -1.9 -3.1 ATPase compare
AO353_11165 -1.9 -9.2 hypothetical protein compare
AO353_06040 -1.9 -3.5 exodeoxyribonuclease V subunit alpha compare
AO353_09890 -1.9 -5.3 phosphate ABC transporter ATP-binding protein compare
AO353_06720 -1.9 -2.4 NrdR family transcriptional regulator compare
AO353_00865 -1.9 -8.8 phosphoenolpyruvate synthase compare
AO353_15185 -1.8 -4.8 ATPase compare
AO353_03590 -1.8 -3.8 crossover junction endodeoxyribonuclease RuvC compare
AO353_16280 -1.8 -6.8 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 1 (from data) compare
AO353_00825 -1.8 -3.8 porin compare
AO353_16285 -1.8 -8.0 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) conserved
AO353_13100 -1.8 -1.6 GTPase RsgA compare
AO353_10705 -1.8 -4.4 tryptophan synthase subunit alpha compare
AO353_21625 -1.7 -2.6 Fe/S biogenesis protein NfuA compare
AO353_09945 -1.7 -4.9 LysR family transcriptional regulator compare
AO353_07355 -1.7 -5.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_01375 -1.6 -5.8 phosphate acyltransferase compare
AO353_08780 -1.6 -6.8 5-formyltetrahydrofolate cyclo-ligase compare
AO353_07315 -1.6 -2.4 rRNA methyltransferase compare
AO353_10445 -1.6 -1.8 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_06045 -1.6 -5.9 exodeoxyribonuclease V subunit beta compare
AO353_07075 -1.6 -4.5 elongation factor Tu compare
AO353_14115 -1.5 -5.7 gamma-glutamyl kinase compare
AO353_01410 -1.5 -3.6 ribonuclease E compare
AO353_04055 -1.5 -2.7 methionine--tRNA ligase compare
AO353_16290 -1.5 -8.5 ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) conserved
AO353_05420 -1.4 -1.8 peptide chain release factor 3 compare
AO353_06155 -1.4 -7.3 copper-transporting ATPase compare
AO353_15900 -1.4 -2.6 GTP-binding protein compare
AO353_16270 -1.4 -10.3 histidine kinase conserved
AO353_19360 -1.4 -2.8 peroxiredoxin compare
AO353_15250 -1.4 -3.2 cytochrome B compare
AO353_00750 -1.4 -3.3 GntR family transcriptional regulator compare
AO353_14940 -1.4 -3.2 malate:quinone oxidoreductase compare
AO353_13160 -1.3 -2.3 membrane protease HflC compare
AO353_27650 -1.3 -4.0 cell division protein FtsK compare
AO353_07325 -1.3 -1.9 diadenosine tetraphosphatase compare
AO353_16265 -1.3 -4.8 Fis family transcriptional regulator compare
AO353_02720 -1.3 -4.7 cysteine synthase compare
AO353_13245 -1.3 -5.6 hypothetical protein compare
AO353_16210 -1.2 -8.5 XRE family transcriptional regulator compare
AO353_04355 -1.2 -1.9 homoserine dehydrogenase compare
AO353_15830 -1.2 -2.7 transcriptional regulator compare
AO353_05080 -1.2 -7.4 sulfate adenylyltransferase compare
AO353_09050 -1.2 -3.1 recombinase XerC compare
AO353_04565 -1.2 -4.1 nucleoid-associated protein compare
AO353_13390 -1.2 -6.3 N-acylglucosamine 2-epimerase compare
AO353_20175 -1.2 -2.7 ATP-dependent Clp protease proteolytic subunit compare
AO353_10945 -1.1 -2.4 cytochrome C compare
AO353_03585 -1.1 -2.3 ATP-dependent DNA helicase RuvA compare
AO353_13225 -1.1 -2.5 50S ribosomal protein L9 compare
AO353_12935 -1.1 -3.0 glycosyltransferase compare
AO353_14740 -1.1 -2.5 GTP-binding protein compare
AO353_20410 -1.1 -2.1 hypothetical protein compare
AO353_03365 -1.1 -5.6 transcriptional regulator compare
AO353_12420 -1.1 -2.8 predicted FeS cluster maintenance protein (from data) compare
AO353_00635 -1.1 -2.6 hypothetical protein compare
AO353_13155 -1.0 -3.0 hypothetical protein compare
AO353_14405 -1.0 -6.9 ATPase compare
AO353_08485 -1.0 -7.4 threonine dehydratase compare
AO353_00660 -1.0 -2.2 transcriptional regulator compare
AO353_14485 -1.0 -1.3 pseudouridine synthase compare
AO353_10495 -1.0 -2.5 serine hydroxymethyltransferase compare
AO353_14775 -1.0 -4.0 hypothetical protein compare
AO353_13640 -1.0 -3.2 histidine kinase compare
AO353_18890 -1.0 -3.8 cytochrome C compare
AO353_05075 -1.0 -5.6 adenylylsulfate kinase compare
AO353_10520 -1.0 -3.9 GntR family transcriptional regulator compare
AO353_11530 -1.0 -5.4 diguanylate cyclase compare
AO353_14590 -1.0 -1.6 serine kinase/phosphatase compare
AO353_13685 -1.0 -2.7 3-dehydroquinate dehydratase compare
AO353_00620 -1.0 -1.7 cytochrome C oxidase Cbb3 compare
AO353_09955 -1.0 -7.6 sodium:alanine symporter compare
AO353_19090 -1.0 -1.8 MarR family transcriptional regulator compare
AO353_20630 -1.0 -5.1 SAM-dependent methyltransferase compare
AO353_08130 -1.0 -1.9 uracil phosphoribosyltransferase compare
AO353_02000 -1.0 -2.9 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_20835 -1.0 -3.4 Ribokinase (EC 2.7.1.15) (from data) compare
AO353_10985 -1.0 -2.3 hypothetical protein compare
AO353_03520 -1.0 -2.2 hypothetical protein compare
AO353_13080 -0.9 -4.8 thiosulfate sulfurtransferase compare
AO353_18420 -0.9 -3.0 hypothetical protein compare
AO353_15725 -0.9 -2.8 hypothetical protein compare
AO353_13140 -0.9 -3.5 tRNA dimethylallyltransferase compare
AO353_19250 -0.9 -1.5 molybdenum cofactor guanylyltransferase compare
AO353_05140 -0.9 -4.5 outer membrane lipid asymmetry maintenance protein MlaD compare
AO353_06160 -0.9 -3.2 transcriptional regulator compare
AO353_12105 -0.9 -3.7 peptidase S41 compare
AO353_12140 -0.9 -3.7 hypothetical protein compare
AO353_12930 -0.9 -2.5 GlcNAc-PI de-N-acetylase compare
AO353_20185 -0.9 -3.6 DNA-binding protein compare
AO353_08265 -0.8 -3.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_10435 -0.8 -5.1 chromosome partitioning protein compare
AO353_21630 -0.8 -2.0 precorrin-4 C11-methyltransferase compare
AO353_13605 -0.8 -4.3 oxidoreductase compare
AO353_03615 -0.8 -1.8 cold-shock protein compare
AO353_06050 -0.8 -3.7 exodeoxyribonuclease V subunit gamma compare
AO353_09950 -0.8 -2.7 aspartate ammonia-lyase compare
AO353_05625 -0.8 -1.1 transcription elongation factor GreA compare
AO353_02810 -0.8 -4.2 histidine kinase compare
AO353_14595 -0.8 -4.5 carbonate dehydratase compare
AO353_13220 -0.8 -3.7 hypothetical protein compare
AO353_20565 -0.8 -1.4 tRNA-Ala compare
AO353_01035 -0.8 -2.1 hypothetical protein compare
AO353_26945 -0.8 -1.6 transcriptional regulator compare
AO353_13200 -0.8 -5.3 exoribonuclease R compare
AO353_17650 -0.8 -3.1 response regulator SirA compare
AO353_20095 -0.8 -3.4 histidine kinase compare
AO353_04220 -0.8 -3.0 chemotaxis protein CheY compare
AO353_11770 -0.8 -1.4 molecular chaperone Hsp33 compare
AO353_25955 -0.8 -2.1 NIPSNAP family containing protein compare
AO353_18425 -0.8 -2.7 hypothetical protein compare
AO353_23405 -0.8 -1.5 hypothetical protein compare
AO353_16805 -0.8 -3.0 recombinase RecA compare
AO353_16740 -0.8 -2.4 phage tail protein compare
AO353_29270 -0.8 -2.4 type VI secretion system protein compare
AO353_23495 -0.8 -1.6 SAM-dependent methyltransferase compare
AO353_00650 -0.7 -1.7 cytochrome biogenesis protein compare
AO353_02920 -0.7 -2.4 serine recombinase compare
AO353_20170 -0.7 -2.3 trigger factor compare
AO353_10550 -0.7 -3.1 glutamine amidotransferase compare
AO353_00265 -0.7 -1.8 hypothetical protein compare
AO353_21615 -0.7 -4.8 methionine synthase compare
AO353_01975 -0.7 -3.7 glycosyl transferase compare
AO353_14395 -0.7 -2.3 poly(A) polymerase compare
AO353_07525 -0.7 -5.2 biotin synthase compare
AO353_04360 -0.7 -3.2 protein-disulfide isomerase compare
AO353_16155 -0.7 -1.8 antibiotic biosynthesis monooxygenase compare
AO353_24120 -0.7 -1.6 hypothetical protein compare
AO353_16845 -0.7 -4.3 LysR family transcriptional regulator compare
AO353_15785 -0.7 -3.4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
AO353_10455 -0.7 -1.2 tRNA modification GTPase MnmE compare
AO353_11730 -0.7 -4.1 glutamate--cysteine ligase compare
AO353_20840 -0.7 -1.4 ribose pyranase compare
AO353_26285 -0.7 -1.5 hypothetical protein compare
AO353_11695 -0.7 -1.8 hypothetical protein compare
AO353_18960 -0.7 -1.5 terminase compare
AO353_03540 -0.7 -3.0 7-carboxy-7-deazaguanine synthase compare
AO353_08470 -0.7 -2.4 RNA pyrophosphohydrolase compare
AO353_02270 -0.7 -2.5 isochorismatase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms