Experiment set2IT023 for Bifidobacterium breve UCC2003
CDM1 without Aspartate
Group: nutrient dropoutMedia: CDM1 + no Aspartate, pH=7
Culturing: Bifido_ML2, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Anthony Shiver on 12/9/2019
Growth plate: CDM1_nutrientdrop B11
Specific Phenotypes
For 1 genes in this experiment
For nutrient dropout no Aspartate in Bifidobacterium breve UCC2003
For nutrient dropout no Aspartate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Purine conversions | 1 |
| Queuosine-Archaeosine Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| adenine and adenosine salvage II | 2 | 2 | 1 |
| guanine and guanosine salvage II | 2 | 2 | 1 |
| superpathway of guanosine nucleotides degradation (plants) | 6 | 3 | 2 |
| adenosine nucleotides degradation I | 8 | 5 | 2 |
| purine nucleotides degradation I (plants) | 12 | 7 | 3 |
| guanosine nucleotides degradation II | 4 | 2 | 1 |
| guanosine nucleotides degradation I | 4 | 2 | 1 |
| superpathway of purines degradation in plants | 18 | 7 | 3 |