Experiment set2IT021 for Methanococcus maripaludis JJ

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.1 12.2 hypothetical protein compare
MMJJ_RS01590 +0.8 2.4 adenine phosphoribosyltransferase compare
MMJJ_RS09295 +0.7 1.1 hypothetical protein compare
MMJJ_RS09380 +0.7 2.9 hypothetical protein compare
MMJJ_RS04375 +0.6 3.3 hypothetical protein compare
MMJJ_RS08130 +0.6 0.7 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS05765 +0.5 0.5 flagellar protein E compare
MMJJ_RS06740 +0.5 3.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS03360 +0.5 0.8 hypothetical protein compare
MMJJ_RS09300 +0.5 1.4 hypothetical protein compare
MMJJ_RS06885 +0.4 0.9 EhaF family protein compare
MMJJ_RS05685 +0.4 3.2 class III signal peptide-containing protein compare
MMJJ_RS09120 +0.4 1.2 aspartate kinase compare
MMJJ_RS03070 +0.4 1.8 MetS family NSS transporter small subunit compare
MMJJ_RS04005 +0.4 3.8 acetate--CoA ligase family protein compare
MMJJ_RS08775 +0.4 3.3 PfkB family carbohydrate kinase compare
MMJJ_RS03835 +0.4 2.2 DUF504 domain-containing protein compare
MMJJ_RS08785 +0.4 2.4 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS00420 +0.4 2.3 CBS domain-containing protein compare
MMJJ_RS01140 +0.4 1.5 helix-turn-helix domain-containing protein compare
MMJJ_RS05915 +0.4 1.3 multiprotein bridging factor aMBF1 compare
MMJJ_RS03410 +0.3 1.4 hypothetical protein compare
MMJJ_RS06120 +0.3 2.6 DUF4013 domain-containing protein compare
MMJJ_RS08935 +0.3 0.6 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS05740 +0.3 2.7 archaellar assembly protein FlaJ compare
MMJJ_RS00950 +0.3 2.0 DUF111 family protein compare
MMJJ_RS09370 +0.3 1.5 heavy-metal-associated domain-containing protein compare
MMJJ_RS06455 +0.3 2.6 YeeE/YedE family protein compare
MMJJ_RS07985 +0.3 1.6 hypothetical protein compare
MMJJ_RS05745 +0.3 2.7 type II/IV secretion system ATPase subunit compare
MMJJ_RS05510 +0.3 2.4 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05870 +0.3 1.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS06495 +0.3 1.3 hypothetical protein compare
MMJJ_RS08730 +0.3 2.6 glycosyltransferase family 4 protein compare
MMJJ_RS06800 +0.3 2.1 prefoldin subunit alpha compare
MMJJ_RS08370 +0.3 2.0 hypothetical protein compare
MMJJ_RS00525 +0.3 1.0 Dabb family protein compare
MMJJ_RS07210 +0.3 2.4 AmmeMemoRadiSam system protein B compare
MMJJ_RS07235 +0.3 2.6 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS06810 +0.3 2.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06770 +0.3 2.6 hypothetical protein compare
MMJJ_RS00870 +0.3 2.0 F420-nonreducing hydrogenase compare
MMJJ_RS01265 +0.3 1.6 cupin domain-containing protein compare
MMJJ_RS08705 +0.3 2.1 AEC family transporter compare
MMJJ_RS05750 +0.3 2.3 flagellar accessory protein FlaH compare
MMJJ_RS04345 +0.3 1.7 DUF2080 family transposase-associated protein compare
MMJJ_RS03725 +0.3 1.3 sulfurtransferase TusA family protein compare
MMJJ_RS06710 +0.3 2.3 TldD/PmbA family protein compare
MMJJ_RS00745 +0.3 1.1 hypothetical protein compare
MMJJ_RS03510 +0.3 1.9 acyl-CoA dehydratase activase compare
MMJJ_RS01100 +0.3 0.3 helix-turn-helix domain-containing protein compare
MMJJ_RS06975 +0.3 1.0 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS05760 +0.3 2.2 flagellar protein F compare
MMJJ_RS07260 +0.3 2.0 PspC domain-containing protein compare
MMJJ_RS07175 +0.3 2.2 DEAD/DEAH box helicase compare
MMJJ_RS08445 +0.2 1.4 cell division ATPase MinD compare
MMJJ_RS07280 +0.2 1.8 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS07760 +0.2 1.7 GNAT family N-acetyltransferase compare
MMJJ_RS09230 +0.2 1.0 hypothetical protein compare
MMJJ_RS01785 +0.2 0.4 50S ribosomal protein L14e compare
MMJJ_RS06470 +0.2 1.8 tripartite tricarboxylate transporter permease compare
MMJJ_RS07690 +0.2 1.8 glycosyltransferase family 4 protein compare
MMJJ_RS07750 +0.2 0.9 class III signal peptide-containing protein compare
MMJJ_RS01745 +0.2 1.5 metal-dependent transcriptional regulator compare
MMJJ_RS08780 +0.2 1.4 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS06735 +0.2 1.7 cobalt ECF transporter T component CbiQ compare
MMJJ_RS08470 +0.2 0.9 ferredoxin family protein compare
MMJJ_RS05505 +0.2 2.2 hypothetical protein compare
MMJJ_RS09255 +0.2 0.8 hypothetical protein compare
MMJJ_RS05970 +0.2 0.6 MJ0307 family thioredoxin compare
MMJJ_RS07610 +0.2 1.5 DUF2119 domain-containing protein compare
MMJJ_RS01125 +0.2 1.3 hypothetical protein compare
MMJJ_RS08760 +0.2 1.9 glycosyltransferase family 9 protein compare
MMJJ_RS06275 +0.2 1.4 hypothetical protein compare
MMJJ_RS08515 +0.2 0.9 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS04165 +0.2 1.8 sodium:solute symporter compare
MMJJ_RS00655 +0.2 1.3 CBS domain-containing protein compare
MMJJ_RS08310 +0.2 1.4 ZIP family metal transporter compare
MMJJ_RS07035 +0.2 0.3 glycosyl transferase compare
MMJJ_RS06580 +0.2 1.6 alanine dehydrogenase compare
MMJJ_RS07240 +0.2 1.9 MBL fold metallo-hydrolase compare
MMJJ_RS04585 +0.2 1.3 phenylacetate--CoA ligase compare
MMJJ_RS01515 +0.2 1.2 DUF2178 domain-containing protein compare
MMJJ_RS06720 +0.2 1.5 mechanosensitive ion channel family protein compare
MMJJ_RS06790 +0.2 1.7 nucleotidyltransferase family protein compare
MMJJ_RS05335 +0.2 1.3 heavy metal-binding domain-containing protein compare
MMJJ_RS09325 +0.2 1.3 hypothetical protein compare
MMJJ_RS06280 +0.2 1.7 hypothetical protein compare
MMJJ_RS02110 +0.2 1.3 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS08040 +0.2 1.7 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06075 +0.2 1.3 DNA-binding protein Alba compare
MMJJ_RS01855 +0.2 1.6 MBL fold metallo-hydrolase compare
MMJJ_RS07385 +0.2 1.4 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS07500 +0.2 1.6 hypothetical protein compare
MMJJ_RS08350 +0.2 1.8 heavy metal translocating P-type ATPase compare
MMJJ_RS06445 +0.2 1.7 hypothetical protein compare
MMJJ_RS06190 +0.2 1.6 7-cyano-7-deazaguanine synthase compare
MMJJ_RS08195 +0.2 1.1 DUF4186 domain-containing protein compare
MMJJ_RS06685 +0.2 1.7 S-layer protein compare
MMJJ_RS05985 +0.2 1.3 ABC transporter substrate-binding protein compare
MMJJ_RS01395 +0.2 1.1 DUF1894 domain-containing protein compare
MMJJ_RS03345 +0.2 1.2 hypothetical protein compare
MMJJ_RS08075 +0.2 1.6 ATP-dependent DNA helicase compare
MMJJ_RS01275 +0.2 0.8 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS06055 +0.2 1.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS09330 +0.2 1.2 hypothetical protein compare
MMJJ_RS06585 +0.2 1.2 alanine racemase compare
MMJJ_RS06540 +0.2 0.9 DUF2120 domain-containing protein compare
MMJJ_RS03045 +0.2 1.4 hypothetical protein compare
MMJJ_RS08400 +0.2 0.7 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS05755 +0.2 1.4 flagellar protein G compare
MMJJ_RS06430 +0.2 1.1 haloacid dehalogenase compare
MMJJ_RS09065 +0.2 1.2 hypothetical protein compare
MMJJ_RS04215 +0.2 1.5 DMT family transporter compare
MMJJ_RS07255 +0.2 1.6 hypothetical protein compare
MMJJ_RS06665 +0.2 0.9 DUF3236 domain-containing protein compare
MMJJ_RS00335 +0.2 0.9 chemotaxis protein CheW compare
MMJJ_RS07225 +0.2 1.2 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS08655 +0.2 1.4 phospholipase D-like domain-containing protein compare
MMJJ_RS03850 +0.2 1.0 nucleoside-diphosphate kinase compare
MMJJ_RS06205 +0.2 1.3 EamA family transporter compare
MMJJ_RS06460 +0.2 1.2 cytochrome c compare
MMJJ_RS06520 +0.2 1.2 TldD/PmbA family protein compare
MMJJ_RS08945 +0.2 1.0 DUF61 family protein compare
MMJJ_RS07965 +0.2 0.8 hypothetical protein compare
MMJJ_RS06640 +0.2 1.1 YfcE family phosphodiesterase compare
MMJJ_RS00330 +0.2 1.2 chemotaxis response regulator protein-glutamate methylesterase compare
MMJJ_RS06440 +0.2 1.2 DUF4870 domain-containing protein compare
MMJJ_RS06285 +0.2 1.1 YchF/TatD family DNA exonuclease compare
MMJJ_RS06765 +0.2 1.4 hypothetical protein compare
MMJJ_RS00140 +0.2 0.7 hypothetical protein compare
MMJJ_RS03515 +0.2 1.0 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS07220 +0.2 1.3 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS09265 +0.2 0.7 hypothetical protein compare
MMJJ_RS05690 +0.2 1.5 hypothetical protein compare
MMJJ_RS04325 +0.2 1.1 tyrosine-type recombinase/integrase compare
MMJJ_RS08740 +0.2 1.3 class I SAM-dependent methyltransferase compare
MMJJ_RS05900 +0.2 1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS01060 +0.2 0.7 ABC transporter ATP-binding protein compare
MMJJ_RS06105 +0.2 1.1 DUF99 family protein compare
MMJJ_RS02290 +0.1 1.2 MarR family transcriptional regulator compare
MMJJ_RS06515 +0.1 1.1 ribonuclease III compare
MMJJ_RS06745 +0.1 1.2 energy-coupling factor ABC transporter permease compare
MMJJ_RS05980 +0.1 1.1 DUF5400 domain-containing protein compare
MMJJ_RS08490 +0.1 0.5 rubrerythrin family protein compare
MMJJ_RS08930 +0.1 1.2 5'/3'-nucleotidase SurE compare
MMJJ_RS07450 +0.1 0.9 hypothetical protein compare
MMJJ_RS08805 +0.1 0.9 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMJJ_RS07230 +0.1 1.0 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07445 +0.1 1.1 RlmF-related methyltransferase compare
MMJJ_RS08580 +0.1 0.6 YkgJ family cysteine cluster protein compare
MMJJ_RS05815 +0.1 0.7 hypothetical protein compare
MMJJ_RS09155 +0.1 1.2 RluA family pseudouridine synthase compare
MMJJ_RS03450 +0.1 0.8 hypothetical protein compare
MMJJ_RS08750 +0.1 1.2 glycosyltransferase compare
MMJJ_RS08395 +0.1 1.2 CoB--CoM heterodisulfide reductase subunit B compare
MMJJ_RS03375 +0.1 0.9 hypothetical protein compare
MMJJ_RS04635 +0.1 0.8 DUF367 family protein compare
MMJJ_RS06500 +0.1 1.0 class I SAM-dependent methyltransferase compare
MMJJ_RS01505 +0.1 0.9 DUF2124 domain-containing protein compare
MMJJ_RS05890 +0.1 1.2 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS08555 +0.1 1.0 redox-regulated ATPase YchF compare
MMJJ_RS08295 +0.1 1.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS08345 +0.1 1.1 flavodoxin family protein compare
MMJJ_RS05420 +0.1 0.3 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS04055 +0.1 0.8 hypothetical protein compare
MMJJ_RS03525 +0.1 1.1 2-hydroxyacyl-CoA dehydratase family protein compare
MMJJ_RS00175 +0.1 1.0 cytochrome c biogenesis CcdA family protein compare
MMJJ_RS02065 +0.1 1.2 S-layer protein compare
MMJJ_RS00290 +0.1 1.1 CheF family chemotaxis protein compare
MMJJ_RS07835 +0.1 1.0 UPF0489 family protein compare
MMJJ_RS06590 +0.1 1.1 sodium:alanine symporter family protein compare
MMJJ_RS05365 +0.1 0.7 DUF2798 domain-containing protein compare
MMJJ_RS07270 +0.1 1.0 ribonuclease HII compare
MMJJ_RS04405 +0.1 0.7 hypothetical protein compare
MMJJ_RS04510 +0.1 1.0 hypothetical protein compare
MMJJ_RS00630 +0.1 0.8 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS08915 +0.1 0.8 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS00675 +0.1 1.0 nitrogenase compare
MMJJ_RS02980 +0.1 1.0 TatD family hydrolase compare
MMJJ_RS05730 +0.1 1.0 TIM barrel protein compare
MMJJ_RS07890 +0.1 0.9 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS02185 +0.1 0.9 TIGR00296 family protein compare
MMJJ_RS01465 +0.1 0.7 METTL5 family protein compare
MMJJ_RS05005 +0.1 1.0 hypothetical protein compare
MMJJ_RS02050 +0.1 0.8 peptidylprolyl isomerase compare
MMJJ_RS05585 +0.1 0.9 hypothetical protein compare
MMJJ_RS03885 +0.1 1.0 tetratricopeptide repeat protein compare
MMJJ_RS06550 +0.1 1.0 ABC transporter permease compare
MMJJ_RS05500 +0.1 1.1 hypothetical protein compare
MMJJ_RS03690 +0.1 0.7 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS04950 +0.1 1.1 TIGR00375 family protein compare
MMJJ_RS05530 +0.1 0.6 roadblock/LC7 domain-containing protein compare
MMJJ_RS00650 +0.1 0.9 cation:proton antiporter compare
MMJJ_RS03445 +0.1 0.6 hypothetical protein compare
MMJJ_RS04720 +0.1 0.2 IMP dehydrogenase compare
MMJJ_RS05440 +0.1 0.9 serine/threonine protein kinase compare
MMJJ_RS01260 +0.1 0.8 hypothetical protein compare
MMJJ_RS07905 +0.1 0.9 DUF89 domain-containing protein compare
MMJJ_RS06080 +0.1 1.0 serine/threonine protein kinase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms