Experiment set2IT020 for Methanococcus maripaludis JJ

Compare to:

Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.6 10.1 hypothetical protein compare
MMJJ_RS04005 +1.0 8.6 acetate--CoA ligase family protein compare
MMJJ_RS08775 +0.9 6.7 PfkB family carbohydrate kinase compare
MMJJ_RS07030 +0.9 7.3 hypothetical protein compare
MMJJ_RS01855 +0.8 5.9 MBL fold metallo-hydrolase compare
MMJJ_RS07240 +0.8 6.4 MBL fold metallo-hydrolase compare
MMJJ_RS01785 +0.7 1.0 50S ribosomal protein L14e compare
MMJJ_RS07280 +0.7 4.9 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS01590 +0.7 1.7 adenine phosphoribosyltransferase compare
MMJJ_RS09300 +0.7 1.9 hypothetical protein compare
MMJJ_RS03410 +0.7 3.0 hypothetical protein compare
MMJJ_RS03835 +0.7 2.5 DUF504 domain-containing protein compare
MMJJ_RS04375 +0.6 2.2 hypothetical protein compare
MMJJ_RS06975 +0.6 1.6 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08715 +0.6 3.3 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS01100 +0.6 0.9 helix-turn-helix domain-containing protein compare
MMJJ_RS08785 +0.5 2.8 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS03850 +0.5 2.9 nucleoside-diphosphate kinase compare
MMJJ_RS07750 +0.5 1.6 class III signal peptide-containing protein compare
MMJJ_RS07185 +0.5 2.3 DUF371 domain-containing protein compare
MMJJ_RS00420 +0.5 2.9 CBS domain-containing protein compare
MMJJ_RS07680 +0.5 3.4 glucose-6-phosphate isomerase compare
MMJJ_RS06740 +0.5 2.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS05420 +0.5 1.0 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS01140 +0.4 1.8 helix-turn-helix domain-containing protein compare
MMJJ_RS04750 +0.4 2.6 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS08490 +0.4 1.4 rubrerythrin family protein compare
MMJJ_RS05510 +0.4 2.5 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05915 +0.4 0.8 multiprotein bridging factor aMBF1 compare
MMJJ_RS07010 +0.4 2.1 preprotein translocase subunit Sec61beta compare
MMJJ_RS03605 +0.4 1.5 TIGR00297 family protein compare
MMJJ_RS05750 +0.4 2.6 flagellar accessory protein FlaH compare
MMJJ_RS06455 +0.4 3.0 YeeE/YedE family protein compare
MMJJ_RS07690 +0.4 2.8 glycosyltransferase family 4 protein compare
MMJJ_RS04195 +0.4 2.4 XTP/dITP diphosphatase compare
MMJJ_RS03360 +0.4 0.6 hypothetical protein compare
MMJJ_RS05740 +0.4 2.9 archaellar assembly protein FlaJ compare
MMJJ_RS09295 +0.4 0.4 hypothetical protein compare
MMJJ_RS07765 +0.4 1.7 DMT family protein compare
MMJJ_RS06950 +0.4 2.2 4-demethylwyosine synthase TYW1 compare
MMJJ_RS07500 +0.4 2.8 hypothetical protein compare
MMJJ_RS07450 +0.4 1.6 hypothetical protein compare
MMJJ_RS06800 +0.4 1.9 prefoldin subunit alpha compare
MMJJ_RS06090 +0.4 2.1 hypothetical protein compare
MMJJ_RS07775 +0.4 1.8 fluoride efflux transporter CrcB compare
MMJJ_RS07210 +0.3 2.5 AmmeMemoRadiSam system protein B compare
MMJJ_RS08830 +0.3 1.0 hypothetical protein compare
MMJJ_RS01210 +0.3 1.0 hypothetical protein compare
MMJJ_RS07935 +0.3 0.5 protein fwdD compare
MMJJ_RS06460 +0.3 2.2 cytochrome c compare
MMJJ_RS09065 +0.3 1.7 hypothetical protein compare
MMJJ_RS05280 +0.3 0.4 hypothetical protein compare
MMJJ_RS03015 +0.3 2.4 Ig-like domain-containing protein compare
MMJJ_RS01395 +0.3 1.5 DUF1894 domain-containing protein compare
MMJJ_RS03395 +0.3 0.8 hypothetical protein compare
MMJJ_RS08730 +0.3 2.4 glycosyltransferase family 4 protein compare
MMJJ_RS02180 +0.3 1.5 DHH family phosphoesterase compare
MMJJ_RS06500 +0.3 1.9 class I SAM-dependent methyltransferase compare
MMJJ_RS08365 +0.3 1.4 DsrE family protein compare
MMJJ_RS05745 +0.3 2.3 type II/IV secretion system ATPase subunit compare
MMJJ_RS03935 +0.3 2.4 NAAT family transporter compare
MMJJ_RS08710 +0.3 2.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS07595 +0.3 1.2 hypothetical protein compare
MMJJ_RS03775 +0.3 1.1 50S ribosomal protein L15e compare
MMJJ_RS05200 +0.3 2.3 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS04585 +0.3 2.1 phenylacetate--CoA ligase compare
MMJJ_RS02665 +0.3 0.8 methyl-accepting chemotaxis protein compare
MMJJ_RS02115 +0.3 2.1 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS06640 +0.3 1.7 YfcE family phosphodiesterase compare
MMJJ_RS00840 +0.3 0.7 hypothetical protein compare
MMJJ_RS05760 +0.3 2.3 flagellar protein F compare
MMJJ_RS06925 +0.3 0.7 GMP synthase subunit A compare
MMJJ_RS07260 +0.3 1.9 PspC domain-containing protein compare
MMJJ_RS07205 +0.3 1.2 MTH895/ArsE family thioredoxin-like protein compare
MMJJ_RS01300 +0.3 1.8 MarR family transcriptional regulator compare
MMJJ_RS07495 +0.3 1.7 4Fe-4S binding protein compare
MMJJ_RS05870 +0.3 1.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS02355 +0.3 1.8 DUF2798 domain-containing protein compare
MMJJ_RS08780 +0.3 1.5 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS08580 +0.3 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS06880 +0.3 0.2 EhaG family protein compare
MMJJ_RS05585 +0.3 1.5 hypothetical protein compare
MMJJ_RS05115 +0.3 1.2 P-II family nitrogen regulator compare
MMJJ_RS04500 +0.3 1.8 hypothetical protein compare
MMJJ_RS02000 +0.3 1.0 AzlD domain-containing protein compare
MMJJ_RS04410 +0.3 1.1 hypothetical protein compare
MMJJ_RS03350 +0.3 0.8 hypothetical protein compare
MMJJ_RS05755 +0.3 1.8 flagellar protein G compare
MMJJ_RS00665 +0.3 2.2 lysine 2,3-aminomutase compare
MMJJ_RS05820 +0.3 1.5 DUF2304 domain-containing protein compare
MMJJ_RS07405 +0.3 1.1 histone family protein compare
MMJJ_RS05785 +0.3 1.7 flagellin compare
MMJJ_RS06665 +0.3 1.1 DUF3236 domain-containing protein compare
MMJJ_RS08470 +0.3 0.7 ferredoxin family protein compare
MMJJ_RS07890 +0.3 1.3 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS08100 +0.3 1.5 hypothetical protein compare
MMJJ_RS05790 +0.3 1.5 flagellin compare
MMJJ_RS05520 +0.3 1.7 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS03590 +0.3 1.0 restriction endonuclease compare
MMJJ_RS08515 +0.3 0.8 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS04260 +0.3 1.9 molybdopterin molybdotransferase MoeA compare
MMJJ_RS01745 +0.3 1.0 metal-dependent transcriptional regulator compare
MMJJ_RS01125 +0.3 0.8 hypothetical protein compare
MMJJ_RS03345 +0.3 1.3 hypothetical protein compare
MMJJ_RS06205 +0.3 1.6 EamA family transporter compare
MMJJ_RS05505 +0.3 2.3 hypothetical protein compare
MMJJ_RS06280 +0.2 1.9 hypothetical protein compare
MMJJ_RS02890 +0.2 1.7 ATP-binding protein compare
MMJJ_RS08445 +0.2 1.2 cell division ATPase MinD compare
MMJJ_RS07175 +0.2 1.9 DEAD/DEAH box helicase compare
MMJJ_RS07485 +0.2 1.1 DedA family protein compare
MMJJ_RS03725 +0.2 0.6 sulfurtransferase TusA family protein compare
MMJJ_RS02230 +0.2 1.9 hypothetical protein compare
MMJJ_RS02965 +0.2 1.4 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMJJ_RS01270 +0.2 1.3 4Fe-4S binding protein compare
MMJJ_RS04545 +0.2 0.6 PadR family transcriptional regulator compare
MMJJ_RS05900 +0.2 1.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS04070 +0.2 1.9 DUF2341 domain-containing protein compare
MMJJ_RS04465 +0.2 1.5 MTAP family purine nucleoside phosphorylase compare
MMJJ_RS06190 +0.2 1.7 7-cyano-7-deazaguanine synthase compare
MMJJ_RS08725 +0.2 1.7 flippase compare
MMJJ_RS08225 +0.2 0.9 peptidylprolyl isomerase compare
MMJJ_RS09245 +0.2 1.3 hypothetical protein compare
MMJJ_RS05525 +0.2 1.4 GTP-binding protein compare
MMJJ_RS06720 +0.2 1.5 mechanosensitive ion channel family protein compare
MMJJ_RS06285 +0.2 1.3 YchF/TatD family DNA exonuclease compare
MMJJ_RS08040 +0.2 1.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04780 +0.2 0.9 nucleic acid-binding protein compare
MMJJ_RS08655 +0.2 1.5 phospholipase D-like domain-containing protein compare
MMJJ_RS06540 +0.2 0.7 DUF2120 domain-containing protein compare
MMJJ_RS08720 +0.2 1.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS06520 +0.2 1.4 TldD/PmbA family protein compare
MMJJ_RS08750 +0.2 1.5 glycosyltransferase compare
MMJJ_RS09145 +0.2 1.2 exodeoxyribonuclease III compare
MMJJ_RS06120 +0.2 1.3 DUF4013 domain-containing protein compare
MMJJ_RS02140 +0.2 1.2 preflagellin peptidase FlaK compare
MMJJ_RS05685 +0.2 1.2 class III signal peptide-containing protein compare
MMJJ_RS06440 +0.2 1.2 DUF4870 domain-containing protein compare
MMJJ_RS08885 +0.2 1.4 cysteine--tRNA ligase compare
MMJJ_RS08350 +0.2 1.7 heavy metal translocating P-type ATPase compare
MMJJ_RS08195 +0.2 0.9 DUF4186 domain-containing protein compare
MMJJ_RS04345 +0.2 0.8 DUF2080 family transposase-associated protein compare
MMJJ_RS04955 +0.2 1.2 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS07005 +0.2 0.7 transcription factor S compare
MMJJ_RS00810 +0.2 1.2 GTP-binding protein compare
MMJJ_RS06790 +0.2 1.5 nucleotidyltransferase family protein compare
MMJJ_RS04240 +0.2 1.4 molybdate ABC transporter substrate-binding protein compare
MMJJ_RS03515 +0.2 1.1 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS00745 +0.2 0.7 hypothetical protein compare
MMJJ_RS02340 +0.2 1.3 SAM-dependent methyltransferase compare
MMJJ_RS07025 +0.2 0.8 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS09390 +0.2 0.8 hypothetical protein compare
MMJJ_RS02325 +0.2 1.4 hypothetical protein compare
MMJJ_RS02345 +0.2 1.1 ATP-binding protein compare
MMJJ_RS04755 +0.2 1.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS07835 +0.2 1.2 UPF0489 family protein compare
MMJJ_RS06710 +0.2 1.4 TldD/PmbA family protein compare
MMJJ_RS06770 +0.2 1.4 hypothetical protein compare
MMJJ_RS06515 +0.2 1.2 ribonuclease III compare
MMJJ_RS05965 +0.2 1.4 MFS transporter compare
MMJJ_RS05365 +0.2 0.9 DUF2798 domain-containing protein compare
MMJJ_RS01950 +0.2 1.0 hypothetical protein compare
MMJJ_RS07235 +0.2 1.3 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS07215 +0.2 1.3 TIGR00341 family protein compare
MMJJ_RS05405 +0.2 1.2 DNA cytosine methyltransferase compare
MMJJ_RS06585 +0.2 0.9 alanine racemase compare
MMJJ_RS04215 +0.2 1.3 DMT family transporter compare
MMJJ_RS09380 +0.2 0.4 hypothetical protein compare
MMJJ_RS06470 +0.2 1.1 tripartite tricarboxylate transporter permease compare
MMJJ_RS04510 +0.2 1.2 hypothetical protein compare
MMJJ_RS03290 +0.2 1.2 amidohydrolase compare
MMJJ_RS04365 +0.2 0.8 helix-turn-helix transcriptional regulator compare
MMJJ_RS07230 +0.2 0.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS06680 +0.2 0.9 DUF366 family protein compare
MMJJ_RS03735 +0.2 1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS08930 +0.2 0.9 5'/3'-nucleotidase SurE compare
MMJJ_RS03375 +0.2 0.7 hypothetical protein compare
MMJJ_RS04390 +0.2 1.2 rhomboid family intramembrane serine protease compare
MMJJ_RS03685 +0.2 1.3 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS00870 +0.2 0.8 F420-nonreducing hydrogenase compare
MMJJ_RS02845 +0.2 1.1 hypothetical protein compare
MMJJ_RS07785 +0.2 0.3 fumarate reductase subunit A compare
MMJJ_RS05975 +0.2 0.8 sulfurtransferase TusA family protein compare
MMJJ_RS01795 +0.2 1.0 TIGR00266 family protein compare
MMJJ_RS00335 +0.2 0.7 chemotaxis protein CheW compare
MMJJ_RS01945 +0.2 0.8 cell division ATPase MinD compare
MMJJ_RS04360 +0.2 0.9 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS08760 +0.2 1.0 glycosyltransferase family 9 protein compare
MMJJ_RS06735 +0.2 1.0 cobalt ECF transporter T component CbiQ compare
MMJJ_RS02880 +0.2 1.0 hypothetical protein compare
MMJJ_RS03740 +0.2 1.0 thiamine pyrophosphate-dependent enzyme compare
MMJJ_RS03045 +0.2 0.9 hypothetical protein compare
MMJJ_RS07760 +0.2 0.8 GNAT family N-acetyltransferase compare
MMJJ_RS04315 +0.2 1.1 alpha/beta hydrolase compare
MMJJ_RS02185 +0.2 0.8 TIGR00296 family protein compare
MMJJ_RS05500 +0.2 1.3 hypothetical protein compare
MMJJ_RS01260 +0.1 1.0 hypothetical protein compare
MMJJ_RS00675 +0.1 1.0 nitrogenase compare
MMJJ_RS02330 +0.1 1.0 ABC transporter ATP-binding protein compare
MMJJ_RS03510 +0.1 0.9 acyl-CoA dehydratase activase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms