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Experiment set2IT019 for
Methanococcus maripaludis S2
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Collected from freezer stock
200 most important genes:
gene
name
fitness
t score
description
MMP
_RS07845
-1.2
-3.7
LL-diaminopimelate aminotransferase
compare
MMP
_RS06630
-1.0
-2.0
UPF0058 family protein
compare
MMP
_RS07605
-0.9
-5.1
diadenylate cyclase
compare
MMP
_RS08440
-0.8
-2.6
cell division protein SepF
compare
MMP
_RS07580
-0.8
-3.4
DUF356 domain-containing protein
compare
MMP
_RS06600
-0.7
-1.8
class III signal peptide-containing protein
compare
MMP
_RS01775
-0.7
-2.3
TIGR00297 family protein
compare
MMP
_RS05920
-0.7
-0.8
50S ribosomal protein L37e
compare
MMP
_RS01755
-0.7
-1.4
DUF2097 domain-containing protein
compare
MMP
_RS06530
-0.7
-4.0
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
compare
MMP
_RS01570
-0.6
-1.5
hypothetical protein
compare
MMP
_RS06855
-0.6
-4.6
hypothetical protein
compare
MMP
_RS07820
-0.6
-2.6
UPF0104 family protein
compare
MMP
_RS00305
-0.6
-1.5
phosphoribosyl-ATP diphosphatase
compare
MMP
_RS08785
-0.6
-1.1
RNA-protein complex protein Nop10
compare
MMP
_RS05345
-0.6
-3.6
hypothetical protein
compare
MMP
_RS06625
-0.5
-1.7
DNA primase
compare
MMP
_RS06130
-0.5
-2.5
peptidylprolyl isomerase
compare
MMP
_RS04090
-0.5
-1.4
hypothetical protein
compare
MMP
_RS08280
-0.5
-2.5
proteasome assembly chaperone family protein
compare
MMP
_RS00810
-0.5
-3.8
topoisomerase DNA-binding C4 zinc finger domain-containing protein
compare
MMP
_RS03305
-0.5
-3.5
winged helix-turn-helix domain-containing protein
compare
MMP
_RS01545
-0.5
-0.8
CBS domain-containing protein
compare
MMP
_RS04585
-0.5
-3.9
AIR synthase related protein
compare
MMP
_RS00320
-0.5
-1.0
class I SAM-dependent methyltransferase
compare
MMP
_RS06555
-0.5
-2.2
cupin domain-containing protein
compare
MMP
_RS06865
-0.5
-2.0
HypC/HybG/HupF family hydrogenase formation chaperone
compare
MMP
_RS08155
-0.5
-3.1
hypothetical protein
compare
MMP
_RS02815
-0.5
-1.9
hypothetical protein
compare
MMP
_RS07125
-0.5
-2.4
coenzyme F420-reducing hydrogenase FrhD protein
compare
MMP
_RS06535
-0.5
-2.8
2-oxoacid:acceptor oxidoreductase family protein
compare
MMP
_RS01540
-0.5
-2.2
DUF504 domain-containing protein
compare
MMP
_RS03895
-0.5
-2.2
hypothetical protein
compare
MMP
_RS09025
-0.5
-0.9
hypothetical protein
compare
MMP
_RS05875
-0.5
-1.1
hydroxyethylthiazole kinase
compare
MMP
_RS08355
-0.5
-3.2
Na(+)/H(+) antiporter subunit B
compare
MMP
_RS03555
-0.4
-2.4
transcriptional regulator
compare
MMP
_RS08790
-0.4
-1.0
translation initiation factor IF-2 subunit alpha
compare
MMP
_RS01720
-0.4
-1.3
replication factor C large subunit
compare
MMP
_RS05795
-0.4
-1.7
redox-regulated ATPase YchF
compare
MMP
_RS06885
-0.4
-1.5
50S ribosome-binding GTPase
compare
MMP
_RS03340
-0.4
-0.6
ABC transporter ATP-binding protein
compare
MMP
_RS04265
-0.4
-2.0
coenzyme F420-reducing hydrogenase FrhD protein
compare
MMP
_RS01270
-0.4
-3.3
prepilin peptidase
compare
MMP
_RS08435
-0.4
-1.5
Era-like GTP-binding protein
compare
MMP
_RS00945
-0.4
-0.8
PadR family transcriptional regulator
compare
MMP
_RS04775
-0.4
-2.1
adenosylhomocysteinase
compare
MMP
_RS03095
-0.4
-2.1
diphthine synthase
compare
MMP
_RS07875
-0.4
-2.3
hypothetical protein
compare
MMP
_RS00655
-0.4
-1.9
hypothetical protein
compare
MMP
_RS03395
-0.4
-1.3
hypothetical protein
compare
MMP
_RS03965
-0.4
-1.4
hypothetical protein
compare
MMP
_RS07390
-0.4
-1.6
cell division protein FtsZ
compare
MMP
_RS06315
-0.4
-0.7
cobalt-precorrin-7 (C(5))-methyltransferase
compare
MMP
_RS04520
-0.4
-1.4
nucleoside deaminase
compare
MMP
_RS07685
-0.4
-2.3
TIGR01212 family radical SAM protein
compare
MMP
_RS02915
-0.4
-1.9
amino acid ABC transporter permease
compare
MMP
_RS08445
-0.4
-2.1
DUF2099 family protein
compare
MMP
_RS03250
-0.4
-1.9
MJ1244 family protein
compare
MMP
_RS01085
-0.4
-1.1
hypothetical protein
compare
MMP
_RS07085
-0.4
-2.2
ribonuclease HII
compare
MMP
_RS01685
-0.4
-1.2
indolepyruvate oxidoreductase subunit beta
compare
MMP
_RS07185
-0.4
-2.6
pyridoxal phosphate-dependent aminotransferase
compare
MMP
_RS07005
-0.4
-0.5
4Fe-4S binding protein
compare
MMP
_RS03490
-0.4
-1.1
DUF2115 domain-containing protein
compare
MMP
_RS06435
-0.4
-2.7
CBS domain-containing protein
compare
MMP
_RS00110
-0.4
-1.2
hypothetical protein
compare
MMP
_RS03840
-0.3
-1.7
hypothetical protein
compare
MMP
_RS03550
-0.3
-1.1
DUF2124 domain-containing protein
compare
MMP
_RS02410
-0.3
-1.4
ABC transporter substrate-binding protein
compare
MMP
_RS07750
-0.3
-1.5
DUF357 domain-containing protein
compare
MMP
_RS08760
-0.3
-1.8
hypothetical protein
compare
MMP
_RS08675
-0.3
-1.3
class III signal peptide-containing protein
compare
MMP
_RS06230
-0.3
-1.2
helix-turn-helix domain-containing protein
compare
MMP
_RS00400
-0.3
-2.3
tributyrin esterase
compare
MMP
_RS07725
-0.3
-1.8
4Fe-4S dicluster domain-containing protein
compare
MMP
_RS02725
-0.3
-2.4
molybdate ABC transporter permease subunit
compare
MMP
_RS05250
-0.3
-0.8
NFYB/HAP3 family transcription factor subunit
compare
MMP
_RS07420
-0.3
-2.4
metalloregulator ArsR/SmtB family transcription factor
compare
MMP
_RS02970
-0.3
-2.4
hypothetical protein
compare
MMP
_RS03035
-0.3
-1.3
4-hydroxy-tetrahydrodipicolinate synthase
compare
MMP
_RS05430
-0.3
-2.0
TIGR00288 family NYN domain-containing protein
compare
MMP
_RS00140
-0.3
-1.7
DUF192 domain-containing protein
compare
MMP
_RS02425
-0.3
-1.7
hypothetical protein
compare
MMP
_RS02800
-0.3
-1.8
nucleotidyltransferase domain-containing protein
compare
MMP
_RS02360
-0.3
-2.4
hypothetical protein
compare
MMP
_RS03325
-0.3
-2.4
hypothetical protein
compare
MMP
_RS00120
-0.3
-1.6
LysR family transcriptional regulator
compare
MMP
_RS05550
-0.3
-0.3
cation:proton antiporter
compare
MMP
_RS05525
-0.3
-1.6
calcium/sodium antiporter
compare
MMP
_RS00985
-0.3
-1.7
CDC48 family AAA ATPase
compare
MMP
_RS06585
-0.3
-0.8
DMT family protein
compare
MMP
_RS00300
-0.3
-0.4
6 7-dimethyl-8-ribityllumazine synthase
compare
MMP
_RS03090
-0.3
-1.9
cation:proton antiporter
compare
MMP
_RS03580
-0.3
-1.0
signal recognition particle-docking protein FtsY
compare
MMP
_RS04715
-0.3
-1.8
CBS domain-containing protein
compare
MMP
_RS01440
-0.3
-1.9
NAAT family transporter
compare
MMP
_RS01450
-0.3
-2.2
tRNA pseudouridine(38-40) synthase TruA
compare
MMP
_RS08975
-0.3
-2.0
hypothetical protein
compare
MMP
_RS08660
-0.3
-2.1
DHH family phosphoesterase
compare
MMP
_RS08070
-0.3
-1.7
DUF2096 domain-containing protein
compare
MMP
_RS06445
-0.3
-1.4
DUF89 domain-containing protein
compare
MMP
_RS06980
-0.3
-2.0
tRNA 2-thiocytidine biosynthesis TtcA family protein
compare
MMP
_RS03140
-0.3
-2.3
hypothetical protein
compare
MMP
_RS00245
-0.3
-2.3
type II secretion system F family protein
compare
MMP
_RS03600
-0.3
-0.7
triose-phosphate isomerase
compare
MMP
_RS08855
-0.3
-1.7
hypothetical protein
compare
MMP
_RS01310
-0.3
-2.0
hypothetical protein
compare
MMP
_RS00990
-0.3
-1.5
hypothetical protein
compare
MMP
_RS06925
-0.3
-0.9
ribonuclease VapC4
compare
MMP
_RS02905
-0.3
-1.3
2-thiouracil desulfurase family protein
compare
MMP
_RS00250
-0.3
-2.3
Flp pilus assembly complex ATPase component TadA
compare
MMP
_RS00900
-0.3
-0.8
50S ribosomal protein L39e
compare
MMP
_RS04440
-0.3
-2.0
nitrogenase iron protein
compare
MMP
_RS03355
-0.3
-1.8
beta-propeller domain-containing protein
compare
MMP
_RS01335
-0.3
-0.8
prefoldin subunit beta
compare
MMP
_RS01460
-0.3
-0.8
hypothetical protein
compare
MMP
_RS07425
-0.3
-1.6
GTP-binding protein
compare
MMP
_RS02085
-0.2
-1.8
inosine/xanthosine triphosphatase
compare
MMP
_RS07680
-0.2
-1.7
DUF366 family protein
compare
MMP
_RS08705
-0.2
-1.6
sulfopyruvate decarboxylase subunit beta
compare
MMP
_RS06095
-0.2
-1.9
ABC transporter ATP-binding protein
compare
MMP
_RS04055
-0.2
-0.7
hypothetical protein
compare
MMP
_RS08580
-0.2
-1.6
flagellin
compare
MMP
_RS05970
-0.2
-1.0
class II SORL domain-containing protein
compare
MMP
_RS06340
-0.2
-1.8
phosphoadenosine phosphosulfate reductase family protein
compare
MMP
_RS03440
-0.2
-0.5
MoaD/ThiS family protein
compare
MMP
_RS04955
-0.2
-1.6
DNA topoisomerase I
compare
MMP
_RS00825
-0.2
-1.1
fumarylacetoacetate hydrolase family protein
compare
MMP
_RS01635
-0.2
-1.5
thiamine pyrophosphate-dependent enzyme
compare
MMP
_RS02705
-0.2
-1.7
formylmethanofuran dehydrogenase subunit B
compare
MMP
_RS04740
-0.2
-1.4
DUF473 domain-containing protein
compare
MMP
_RS02825
-0.2
-1.7
mechanosensitive ion channel family protein
compare
MMP
_RS08655
-0.2
-2.0
phosphoadenosine phosphosulfate reductase family protein
compare
MMP
_RS02870
-0.2
-1.5
hypothetical protein
compare
MMP
_RS07615
-0.2
-1.2
energy-coupling factor ABC transporter permease
compare
MMP
_RS00670
-0.2
-1.2
TIM barrel protein
compare
MMP
_RS05355
-0.2
-0.4
hypothetical protein
compare
MMP
_RS06475
-0.2
-1.2
FAD-dependent oxidoreductase
compare
MMP
_RS07815
-0.2
-0.5
DUF2120 domain-containing protein
compare
MMP
_RS05950
-0.2
-1.7
nickel-dependent hydrogenase large subunit
compare
MMP
_RS00040
-0.2
-1.4
TIGR03576 family pyridoxal phosphate-dependent enzyme
compare
MMP
_RS01455
-0.2
-1.6
nickel pincer cofactor biosynthesis protein LarC
compare
MMP
_RS00240
-0.2
-1.8
type II secretion system F family protein
compare
MMP
_RS07925
-0.2
-1.1
haloacid dehalogenase
compare
MMP
_RS08915
-0.2
-1.1
2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase
compare
MMP
_RS02310
-0.2
-0.7
RimK-like ATPgrasp N-terminal domain-containing protein
compare
MMP
_RS06760
-0.2
-1.2
hypothetical protein
compare
MMP
_RS06930
-0.2
-1.7
MBL fold metallo-hydrolase
compare
MMP
_RS03800
-0.2
-1.1
hypothetical protein
compare
MMP
_RS06305
-0.2
-1.4
transporter substrate-binding domain-containing protein
compare
MMP
_RS08840
-0.2
-1.7
class I SAM-dependent methyltransferase
compare
MMP
_RS05095
-0.2
-1.5
CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon
compare
MMP
_RS08335
-0.2
-1.6
NADH-quinone oxidoreductase subunit B family protein
compare
MMP
_RS06270
-0.2
-1.2
TIGR00300 family protein
compare
MMP
_RS04015
-0.2
-0.9
hypothetical protein
compare
MMP
_RS02575
-0.2
-1.4
CAAX prenyl protease Rce1
compare
MMP
_RS04985
-0.2
-1.0
DUF2180 family protein
compare
MMP
_RS02135
-0.2
-1.3
DUF5612 domain-containing protein
compare
MMP
_RS01200
-0.2
-1.5
hypothetical protein
compare
MMP
_RS04310
-0.2
-1.2
hypothetical protein
compare
MMP
_RS00515
-0.2
-0.3
DUF655 domain-containing protein
compare
MMP
_RS01580
-0.2
-1.6
PQQ-binding-like beta-propeller repeat protein
compare
MMP
_RS06090
-0.2
-1.6
iron ABC transporter permease
compare
MMP
_RS07090
-0.2
-1.7
tRNA (adenine-N1)-methyltransferase
compare
MMP
_RS02810
-0.2
-1.7
hypothetical protein
compare
MMP
_RS07645
-0.2
-1.5
aldehyde dehydrogenase family protein
compare
MMP
_RS05545
-0.2
-1.5
pyridoxal phosphate-dependent aminotransferase
compare
MMP
_RS06730
-0.2
-0.6
phosphopantothenate/pantothenate synthetase
compare
MMP
_RS01745
-0.2
-1.2
AMP phosphorylase
compare
MMP
_RS01280
-0.2
-1.6
DUF515 domain-containing protein
compare
MMP
_RS02690
-0.2
-1.4
FmdE family protein
compare
MMP
_RS01215
-0.2
-1.6
sodium/proline symporter PutP
compare
MMP
_RS08645
-0.2
-1.2
UPF0179 family protein
compare
MMP
_RS07885
-0.2
-0.9
tripartite tricarboxylate transporter permease
compare
MMP
_RS01330
-0.2
-1.9
DHH family phosphoesterase
compare
MMP
_RS01655
-0.2
-1.0
DsrE family protein
compare
MMP
_RS04630
-0.2
-1.0
3'-5' exonuclease
compare
MMP
_RS03735
-0.2
-1.5
indolepyruvate ferredoxin oxidoreductase subunit alpha
compare
MMP
_RS05785
-0.2
-1.7
ATP-binding protein
compare
MMP
_RS01165
-0.2
-1.1
DUF434 domain-containing protein
compare
MMP
_RS08605
-0.2
-1.1
flagellar protein E
compare
MMP
_RS03615
-0.2
-1.6
4Fe-4S binding protein
compare
MMP
_RS06375
-0.2
-1.1
ATP-dependent sacrificial sulfur transferase LarE
compare
MMP
_RS07335
-0.2
-1.1
tRNA (cytidine(56)-2'-O)-methyltransferase
compare
MMP
_RS04405
-0.2
-1.4
hypothetical protein
compare
MMP
_RS04305
-0.2
-0.8
hypothetical protein
compare
MMP
_RS09055
-0.2
-0.4
CAP domain-containing protein
compare
MMP
_RS07595
-0.2
-1.5
hypothetical protein
compare
MMP
_RS00085
-0.2
-1.4
DNA cytosine methyltransferase
compare
MMP
_RS02645
-0.2
-1.4
ArsR family transcriptional regulator
compare
MMP
_RS05070
-0.2
-1.2
4Fe-4S dicluster domain-containing protein
compare
MMP
_RS05420
-0.2
-1.0
DUF61 family protein
compare
MMP
_RS02685
-0.2
-1.6
molybdate ABC transporter substrate-binding protein
compare
MMP
_RS05665
-0.2
-1.4
phosphate ABC transporter permease subunit PstC
compare
MMP
_RS00660
-0.2
-1.8
alkaline phosphatase family protein
compare
MMP
_RS08585
-0.2
-1.2
flagellin
compare
MMP
_RS03630
-0.2
-1.8
hypothetical protein
compare
MMP
_RS03715
-0.2
-1.6
class III signal peptide-containing protein
compare
MMP
_RS02710
-0.2
-1.5
formylmethanofuran dehydrogenase subunit B
compare
Specific Phenotypes
None in this experiment
For Methanococcus maripaludis S2 in freezer experiments