Experiment set2IT019 for Methanococcus maripaludis S2

Compare to:

Collected from freezer stock

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -1.2 -3.7 LL-diaminopimelate aminotransferase compare
MMP_RS06630 -1.0 -2.0 UPF0058 family protein compare
MMP_RS07605 -0.9 -5.1 diadenylate cyclase compare
MMP_RS08440 -0.8 -2.6 cell division protein SepF compare
MMP_RS07580 -0.8 -3.4 DUF356 domain-containing protein compare
MMP_RS06600 -0.7 -1.8 class III signal peptide-containing protein compare
MMP_RS01775 -0.7 -2.3 TIGR00297 family protein compare
MMP_RS05920 -0.7 -0.8 50S ribosomal protein L37e compare
MMP_RS01755 -0.7 -1.4 DUF2097 domain-containing protein compare
MMP_RS06530 -0.7 -4.0 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS01570 -0.6 -1.5 hypothetical protein compare
MMP_RS06855 -0.6 -4.6 hypothetical protein compare
MMP_RS07820 -0.6 -2.6 UPF0104 family protein compare
MMP_RS00305 -0.6 -1.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS08785 -0.6 -1.1 RNA-protein complex protein Nop10 compare
MMP_RS05345 -0.6 -3.6 hypothetical protein compare
MMP_RS06625 -0.5 -1.7 DNA primase compare
MMP_RS06130 -0.5 -2.5 peptidylprolyl isomerase compare
MMP_RS04090 -0.5 -1.4 hypothetical protein compare
MMP_RS08280 -0.5 -2.5 proteasome assembly chaperone family protein compare
MMP_RS00810 -0.5 -3.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03305 -0.5 -3.5 winged helix-turn-helix domain-containing protein compare
MMP_RS01545 -0.5 -0.8 CBS domain-containing protein compare
MMP_RS04585 -0.5 -3.9 AIR synthase related protein compare
MMP_RS00320 -0.5 -1.0 class I SAM-dependent methyltransferase compare
MMP_RS06555 -0.5 -2.2 cupin domain-containing protein compare
MMP_RS06865 -0.5 -2.0 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS08155 -0.5 -3.1 hypothetical protein compare
MMP_RS02815 -0.5 -1.9 hypothetical protein compare
MMP_RS07125 -0.5 -2.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06535 -0.5 -2.8 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS01540 -0.5 -2.2 DUF504 domain-containing protein compare
MMP_RS03895 -0.5 -2.2 hypothetical protein compare
MMP_RS09025 -0.5 -0.9 hypothetical protein compare
MMP_RS05875 -0.5 -1.1 hydroxyethylthiazole kinase compare
MMP_RS08355 -0.5 -3.2 Na(+)/H(+) antiporter subunit B compare
MMP_RS03555 -0.4 -2.4 transcriptional regulator compare
MMP_RS08790 -0.4 -1.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS01720 -0.4 -1.3 replication factor C large subunit compare
MMP_RS05795 -0.4 -1.7 redox-regulated ATPase YchF compare
MMP_RS06885 -0.4 -1.5 50S ribosome-binding GTPase compare
MMP_RS03340 -0.4 -0.6 ABC transporter ATP-binding protein compare
MMP_RS04265 -0.4 -2.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01270 -0.4 -3.3 prepilin peptidase compare
MMP_RS08435 -0.4 -1.5 Era-like GTP-binding protein compare
MMP_RS00945 -0.4 -0.8 PadR family transcriptional regulator compare
MMP_RS04775 -0.4 -2.1 adenosylhomocysteinase compare
MMP_RS03095 -0.4 -2.1 diphthine synthase compare
MMP_RS07875 -0.4 -2.3 hypothetical protein compare
MMP_RS00655 -0.4 -1.9 hypothetical protein compare
MMP_RS03395 -0.4 -1.3 hypothetical protein compare
MMP_RS03965 -0.4 -1.4 hypothetical protein compare
MMP_RS07390 -0.4 -1.6 cell division protein FtsZ compare
MMP_RS06315 -0.4 -0.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS04520 -0.4 -1.4 nucleoside deaminase compare
MMP_RS07685 -0.4 -2.3 TIGR01212 family radical SAM protein compare
MMP_RS02915 -0.4 -1.9 amino acid ABC transporter permease compare
MMP_RS08445 -0.4 -2.1 DUF2099 family protein compare
MMP_RS03250 -0.4 -1.9 MJ1244 family protein compare
MMP_RS01085 -0.4 -1.1 hypothetical protein compare
MMP_RS07085 -0.4 -2.2 ribonuclease HII compare
MMP_RS01685 -0.4 -1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07185 -0.4 -2.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07005 -0.4 -0.5 4Fe-4S binding protein compare
MMP_RS03490 -0.4 -1.1 DUF2115 domain-containing protein compare
MMP_RS06435 -0.4 -2.7 CBS domain-containing protein compare
MMP_RS00110 -0.4 -1.2 hypothetical protein compare
MMP_RS03840 -0.3 -1.7 hypothetical protein compare
MMP_RS03550 -0.3 -1.1 DUF2124 domain-containing protein compare
MMP_RS02410 -0.3 -1.4 ABC transporter substrate-binding protein compare
MMP_RS07750 -0.3 -1.5 DUF357 domain-containing protein compare
MMP_RS08760 -0.3 -1.8 hypothetical protein compare
MMP_RS08675 -0.3 -1.3 class III signal peptide-containing protein compare
MMP_RS06230 -0.3 -1.2 helix-turn-helix domain-containing protein compare
MMP_RS00400 -0.3 -2.3 tributyrin esterase compare
MMP_RS07725 -0.3 -1.8 4Fe-4S dicluster domain-containing protein compare
MMP_RS02725 -0.3 -2.4 molybdate ABC transporter permease subunit compare
MMP_RS05250 -0.3 -0.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07420 -0.3 -2.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS02970 -0.3 -2.4 hypothetical protein compare
MMP_RS03035 -0.3 -1.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05430 -0.3 -2.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS00140 -0.3 -1.7 DUF192 domain-containing protein compare
MMP_RS02425 -0.3 -1.7 hypothetical protein compare
MMP_RS02800 -0.3 -1.8 nucleotidyltransferase domain-containing protein compare
MMP_RS02360 -0.3 -2.4 hypothetical protein compare
MMP_RS03325 -0.3 -2.4 hypothetical protein compare
MMP_RS00120 -0.3 -1.6 LysR family transcriptional regulator compare
MMP_RS05550 -0.3 -0.3 cation:proton antiporter compare
MMP_RS05525 -0.3 -1.6 calcium/sodium antiporter compare
MMP_RS00985 -0.3 -1.7 CDC48 family AAA ATPase compare
MMP_RS06585 -0.3 -0.8 DMT family protein compare
MMP_RS00300 -0.3 -0.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03090 -0.3 -1.9 cation:proton antiporter compare
MMP_RS03580 -0.3 -1.0 signal recognition particle-docking protein FtsY compare
MMP_RS04715 -0.3 -1.8 CBS domain-containing protein compare
MMP_RS01440 -0.3 -1.9 NAAT family transporter compare
MMP_RS01450 -0.3 -2.2 tRNA pseudouridine(38-40) synthase TruA compare
MMP_RS08975 -0.3 -2.0 hypothetical protein compare
MMP_RS08660 -0.3 -2.1 DHH family phosphoesterase compare
MMP_RS08070 -0.3 -1.7 DUF2096 domain-containing protein compare
MMP_RS06445 -0.3 -1.4 DUF89 domain-containing protein compare
MMP_RS06980 -0.3 -2.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03140 -0.3 -2.3 hypothetical protein compare
MMP_RS00245 -0.3 -2.3 type II secretion system F family protein compare
MMP_RS03600 -0.3 -0.7 triose-phosphate isomerase compare
MMP_RS08855 -0.3 -1.7 hypothetical protein compare
MMP_RS01310 -0.3 -2.0 hypothetical protein compare
MMP_RS00990 -0.3 -1.5 hypothetical protein compare
MMP_RS06925 -0.3 -0.9 ribonuclease VapC4 compare
MMP_RS02905 -0.3 -1.3 2-thiouracil desulfurase family protein compare
MMP_RS00250 -0.3 -2.3 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00900 -0.3 -0.8 50S ribosomal protein L39e compare
MMP_RS04440 -0.3 -2.0 nitrogenase iron protein compare
MMP_RS03355 -0.3 -1.8 beta-propeller domain-containing protein compare
MMP_RS01335 -0.3 -0.8 prefoldin subunit beta compare
MMP_RS01460 -0.3 -0.8 hypothetical protein compare
MMP_RS07425 -0.3 -1.6 GTP-binding protein compare
MMP_RS02085 -0.2 -1.8 inosine/xanthosine triphosphatase compare
MMP_RS07680 -0.2 -1.7 DUF366 family protein compare
MMP_RS08705 -0.2 -1.6 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06095 -0.2 -1.9 ABC transporter ATP-binding protein compare
MMP_RS04055 -0.2 -0.7 hypothetical protein compare
MMP_RS08580 -0.2 -1.6 flagellin compare
MMP_RS05970 -0.2 -1.0 class II SORL domain-containing protein compare
MMP_RS06340 -0.2 -1.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03440 -0.2 -0.5 MoaD/ThiS family protein compare
MMP_RS04955 -0.2 -1.6 DNA topoisomerase I compare
MMP_RS00825 -0.2 -1.1 fumarylacetoacetate hydrolase family protein compare
MMP_RS01635 -0.2 -1.5 thiamine pyrophosphate-dependent enzyme compare
MMP_RS02705 -0.2 -1.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04740 -0.2 -1.4 DUF473 domain-containing protein compare
MMP_RS02825 -0.2 -1.7 mechanosensitive ion channel family protein compare
MMP_RS08655 -0.2 -2.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02870 -0.2 -1.5 hypothetical protein compare
MMP_RS07615 -0.2 -1.2 energy-coupling factor ABC transporter permease compare
MMP_RS00670 -0.2 -1.2 TIM barrel protein compare
MMP_RS05355 -0.2 -0.4 hypothetical protein compare
MMP_RS06475 -0.2 -1.2 FAD-dependent oxidoreductase compare
MMP_RS07815 -0.2 -0.5 DUF2120 domain-containing protein compare
MMP_RS05950 -0.2 -1.7 nickel-dependent hydrogenase large subunit compare
MMP_RS00040 -0.2 -1.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01455 -0.2 -1.6 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00240 -0.2 -1.8 type II secretion system F family protein compare
MMP_RS07925 -0.2 -1.1 haloacid dehalogenase compare
MMP_RS08915 -0.2 -1.1 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS02310 -0.2 -0.7 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS06760 -0.2 -1.2 hypothetical protein compare
MMP_RS06930 -0.2 -1.7 MBL fold metallo-hydrolase compare
MMP_RS03800 -0.2 -1.1 hypothetical protein compare
MMP_RS06305 -0.2 -1.4 transporter substrate-binding domain-containing protein compare
MMP_RS08840 -0.2 -1.7 class I SAM-dependent methyltransferase compare
MMP_RS05095 -0.2 -1.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS08335 -0.2 -1.6 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS06270 -0.2 -1.2 TIGR00300 family protein compare
MMP_RS04015 -0.2 -0.9 hypothetical protein compare
MMP_RS02575 -0.2 -1.4 CAAX prenyl protease Rce1 compare
MMP_RS04985 -0.2 -1.0 DUF2180 family protein compare
MMP_RS02135 -0.2 -1.3 DUF5612 domain-containing protein compare
MMP_RS01200 -0.2 -1.5 hypothetical protein compare
MMP_RS04310 -0.2 -1.2 hypothetical protein compare
MMP_RS00515 -0.2 -0.3 DUF655 domain-containing protein compare
MMP_RS01580 -0.2 -1.6 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS06090 -0.2 -1.6 iron ABC transporter permease compare
MMP_RS07090 -0.2 -1.7 tRNA (adenine-N1)-methyltransferase compare
MMP_RS02810 -0.2 -1.7 hypothetical protein compare
MMP_RS07645 -0.2 -1.5 aldehyde dehydrogenase family protein compare
MMP_RS05545 -0.2 -1.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06730 -0.2 -0.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS01745 -0.2 -1.2 AMP phosphorylase compare
MMP_RS01280 -0.2 -1.6 DUF515 domain-containing protein compare
MMP_RS02690 -0.2 -1.4 FmdE family protein compare
MMP_RS01215 -0.2 -1.6 sodium/proline symporter PutP compare
MMP_RS08645 -0.2 -1.2 UPF0179 family protein compare
MMP_RS07885 -0.2 -0.9 tripartite tricarboxylate transporter permease compare
MMP_RS01330 -0.2 -1.9 DHH family phosphoesterase compare
MMP_RS01655 -0.2 -1.0 DsrE family protein compare
MMP_RS04630 -0.2 -1.0 3'-5' exonuclease compare
MMP_RS03735 -0.2 -1.5 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05785 -0.2 -1.7 ATP-binding protein compare
MMP_RS01165 -0.2 -1.1 DUF434 domain-containing protein compare
MMP_RS08605 -0.2 -1.1 flagellar protein E compare
MMP_RS03615 -0.2 -1.6 4Fe-4S binding protein compare
MMP_RS06375 -0.2 -1.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07335 -0.2 -1.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS04405 -0.2 -1.4 hypothetical protein compare
MMP_RS04305 -0.2 -0.8 hypothetical protein compare
MMP_RS09055 -0.2 -0.4 CAP domain-containing protein compare
MMP_RS07595 -0.2 -1.5 hypothetical protein compare
MMP_RS00085 -0.2 -1.4 DNA cytosine methyltransferase compare
MMP_RS02645 -0.2 -1.4 ArsR family transcriptional regulator compare
MMP_RS05070 -0.2 -1.2 4Fe-4S dicluster domain-containing protein compare
MMP_RS05420 -0.2 -1.0 DUF61 family protein compare
MMP_RS02685 -0.2 -1.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS05665 -0.2 -1.4 phosphate ABC transporter permease subunit PstC compare
MMP_RS00660 -0.2 -1.8 alkaline phosphatase family protein compare
MMP_RS08585 -0.2 -1.2 flagellin compare
MMP_RS03630 -0.2 -1.8 hypothetical protein compare
MMP_RS03715 -0.2 -1.6 class III signal peptide-containing protein compare
MMP_RS02710 -0.2 -1.5 formylmethanofuran dehydrogenase subunit B compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in freezer experiments