Experiment set2IT016 for Desulfovibrio vulgaris Miyazaki F

Compare to:

rich MoYLS4

200 most detrimental genes:

  gene name fitness t score description  
DvMF_2515 nusA +2.0 14.2 transcription elongation factor NusA (RefSeq) compare
DvMF_0468 +1.9 10.2 response regulator receiver protein (RefSeq) compare
DvMF_2454 +1.4 11.0 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) compare
DvMF_2764 +1.2 7.8 hypothetical protein (RefSeq) compare
DvMF_0465 +1.2 5.7 response regulator receiver modulated CheB methylesterase (RefSeq) compare
DvMF_2010 +1.1 2.1 response regulator receiver protein (RefSeq) compare
DvMF_1158 +1.1 4.2 transglutaminase family protein cysteine peptidase BTLCP (RefSeq) compare
DvMF_2557 +1.0 9.1 hypothetical protein (RefSeq) compare
DvMF_0028 +1.0 7.0 hypothetical protein (RefSeq) compare
DvMF_0063 +1.0 7.3 response regulator receiver protein (RefSeq) compare
DvMF_0347 +0.9 1.9 ribosomal-protein-alanine acetyltransferase (RefSeq) compare
DvMF_2770 +0.9 5.2 no description compare
DvMF_1018 +0.9 2.8 FeoA family protein (RefSeq) compare
DvMF_2556 +0.9 7.1 hypothetical protein (RefSeq) compare
DvMF_2525 +0.9 7.4 flagellar hook-associated protein 3 (RefSeq) compare
DvMF_0010 +0.9 6.0 diguanylate phosphodiesterase (RefSeq) compare
DvMF_2243 +0.9 3.4 AMP-dependent synthetase and ligase (RefSeq) compare
DvMF_0506 +0.9 3.0 PGAP1 family protein (RefSeq) compare
DvMF_0774 +0.9 5.8 CheA signal transduction histidine kinase (RefSeq) compare
DvMF_2213 +0.8 5.6 flagellar motor switch protein FliN (RefSeq) compare
DvMF_2554 +0.8 4.5 acidic cytochrome c3 (RefSeq) compare
DvMF_1399 +0.8 6.6 Ribosomal small subunit Rsm22 (RefSeq) compare
DvMF_0556 +0.8 6.6 diguanylate cyclase (RefSeq) compare
DvMF_2289 +0.8 7.1 flagellar assembly protein FliH, putative (RefSeq) compare
DvMF_0206 +0.8 3.6 hypothetical protein (RefSeq) compare
DvMF_2521 flgI +0.8 7.8 flagellar basal body P-ring protein (RefSeq) compare
DvMF_2285 +0.8 4.2 flagellar basal-body rod protein FlgC (RefSeq) compare
DvMF_2555 +0.8 7.5 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) compare
DvMF_0557 +0.8 5.8 flagellar synthesis regulator FleN, putative (RefSeq) compare
DvMF_3011 +0.8 1.8 metal dependent phosphohydrolase (RefSeq) compare
DvMF_2290 +0.8 7.3 flagellar protein export ATPase FliI (RefSeq) compare
DvMF_2517 +0.8 6.0 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_2520 flgH +0.7 7.3 flagellar basal body L-ring protein (RefSeq) compare
DvMF_2286 +0.7 5.2 flagellar hook-basal body complex subunit FliE (RefSeq) compare
DvMF_2016 +0.7 6.9 flagellar biosynthetic protein FliR (RefSeq) compare
DvMF_2692 +0.7 6.0 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) compare
DvMF_2693 +0.7 5.4 histidine kinase (RefSeq) compare
DvMF_2518 flgG +0.7 6.3 flagellar basal body rod protein FlgG (RefSeq) compare
DvMF_1000 +0.7 5.3 biotin/acetyl-CoA-carboxylase ligase (RefSeq) compare
DvMF_1325 +0.7 6.3 TPR repeat-containing protein (RefSeq) compare
DvMF_0248 +0.7 6.5 flagellar hook-length control protein (RefSeq) compare
DvMF_2216 +0.7 5.0 flagellar biosynthetic protein FliQ (RefSeq) compare
DvMF_2009 +0.7 5.9 flagellar basal body-associated protein FliL (RefSeq) compare
DvMF_1808 +0.7 6.7 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_2252 +0.7 6.1 DEAD/DEAH box helicase domain protein (RefSeq) compare
DvMF_2215 fliP +0.7 6.2 flagellar biosynthesis protein FliP (RefSeq) compare
DvMF_2284 flgB +0.7 6.0 flagellar basal body rod protein FlgB (RefSeq) compare
DvMF_2519 +0.7 5.9 flagella basal body P-ring formation protein FlgA (RefSeq) compare
DvMF_1324 +0.7 6.2 sigma54 specific transcriptional regulator, Fis family (RefSeq) compare
DvMF_0778 +0.7 4.2 MCP methyltransferase, CheR-type (RefSeq) compare
DvMF_2209 +0.7 1.5 MotA/TolQ/ExbB proton channel (RefSeq) compare
DvMF_2912 +0.7 5.7 flagellar hook-associated 2 domain protein (RefSeq) compare
DvMF_1393 +0.6 3.2 flagellar export protein FliJ (RefSeq) compare
DvMF_2287 +0.6 6.1 flagellar M-ring protein FliF (RefSeq) compare
DvMF_0246 +0.6 5.4 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_0399 +0.6 1.3 multiple antibiotic resistance (MarC)-related protein (RefSeq) compare
DvMF_2668 +0.6 0.9 type IV pilus assembly PilZ (RefSeq) compare
DvMF_2523 +0.6 5.3 FlgN family protein (RefSeq) compare
DvMF_0237 +0.6 2.6 putative CheA signal transduction histidine kinase (RefSeq) compare
DvMF_2524 +0.6 5.8 flagellar hook-associated protein FlgK (RefSeq) compare
DvMF_2753 +0.6 2.7 ABC transporter related (RefSeq) compare
DvMF_2014 flhA +0.6 5.9 flagellar biosynthesis protein FlhA (RefSeq) compare
DvMF_0832 +0.6 0.8 hypothetical protein (RefSeq) compare
DvMF_2015 flhB +0.6 4.6 flagellar biosynthesis protein FlhB (RefSeq) compare
DvMF_1084 +0.6 4.8 OmpA/MotB domain protein (RefSeq) compare
DvMF_2527 +0.6 5.1 flagellar assembly protein FliW (RefSeq) compare
DvMF_0065 +0.6 5.3 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) compare
DvMF_2227 +0.5 1.3 Dinitrogenase iron-molybdenum cofactor biosynthesis protein (RefSeq) compare
DvMF_0724 +0.5 2.4 hypothetical protein (RefSeq) compare
DvMF_0247 +0.5 3.8 flagellar hook capping protein (RefSeq) compare
DvMF_2100 +0.5 1.6 hypothetical protein (RefSeq) compare
DvMF_3200 +0.5 2.4 ribosomal RNA methyltransferase RrmJ/FtsJ (RefSeq) compare
DvMF_0300 +0.5 4.1 CgeB family protein (RefSeq) compare
DvMF_0139 +0.5 0.8 nucleoside recognition domain protein (RefSeq) compare
DvMF_0262 +0.5 1.4 Homocysteine formation from aspartate semialdehyde (NIL/ferredoxin component) (from data) compare
DvMF_0775 +0.5 3.9 response regulator receiver protein (RefSeq) compare
DvMF_2167 +0.5 3.8 transcriptional regulator, MarR family (RefSeq) compare
DvMF_1396 +0.5 4.6 flagellar motor switch protein FliM (RefSeq) compare
DvMF_0559 +0.5 1.3 collagen triple helix repeat protein (RefSeq) compare
DvMF_3174 +0.5 0.7 putative two component transcriptional regulator, winged helix family (RefSeq) compare
DvMF_1574 +0.5 2.8 glycosyl transferase family 9 (RefSeq) compare
DvMF_0295 +0.5 1.8 hypothetical protein (RefSeq) compare
DvMF_0170 +0.5 1.1 hypothetical protein (RefSeq) compare
DvMF_0165 +0.5 1.1 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) compare
DvMF_2301 +0.5 2.2 molybdenum cofactor biosynthesis protein C (RefSeq) compare
DvMF_1085 +0.5 4.4 flagellar motor protein MotA (RefSeq) compare
DvMF_2950 +0.5 4.1 flagellin domain protein (RefSeq) compare
DvMF_2480 +0.5 0.6 Rubredoxin-type Fe(Cys)4 protein (RefSeq) compare
DvMF_0205 +0.5 2.1 hypothetical protein (RefSeq) compare
DvMF_1198 +0.5 0.9 no description compare
DvMF_2011 +0.5 2.5 RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) compare
DvMF_0595 +0.5 1.8 phosphonate ABC transporter, inner membrane subunit (RefSeq) compare
DvMF_2179 +0.5 2.0 Methyltransferase type 11 (RefSeq) compare
DvMF_2288 +0.5 3.1 flagellar motor switch protein FliG (RefSeq) compare
DvMF_1867 +0.5 1.0 protein of unknown function DUF162 (RefSeq) compare
DvMF_1800 +0.5 1.0 phage shock protein B (RefSeq) compare
DvMF_2547 +0.5 3.3 transcriptional regulator, BadM/Rrf2 family (RefSeq) compare
DvMF_0390 +0.5 3.7 hypothetical protein (RefSeq) compare
DvMF_1840 +0.5 3.6 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (RefSeq) compare
DvMF_3020 +0.4 3.8 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_0040 +0.4 1.6 Mammalian cell entry related domain protein (RefSeq) compare
DvMF_0606 +0.4 1.3 hypothetical protein (RefSeq) compare
DvMF_2452 +0.4 3.5 multi-sensor hybrid histidine kinase (RefSeq) compare
DvMF_0426 +0.4 1.9 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) compare
DvMF_1394 +0.4 3.4 hypothetical protein (RefSeq) compare
DvMF_2697 +0.4 0.5 acyltransferase 3 (RefSeq) compare
DvMF_1318 +0.4 1.3 BioY protein (RefSeq) compare
DvMF_1437 +0.4 2.4 transcriptional regulator, MarR family (RefSeq) compare
DvMF_1778 +0.4 0.9 hypothetical protein (RefSeq) compare
DvMF_2711 +0.4 2.3 cytochrome c family protein (RefSeq) compare
DvMF_2891 +0.4 2.9 5-enolpyruvylshikimate-3-phosphate synthase-like protein (RefSeq) compare
DvMF_0387 +0.4 0.6 extracellular solute-binding protein family 3 (RefSeq) compare
DvMF_0455 +0.4 1.6 hypothetical protein (RefSeq) compare
DvMF_3041 +0.4 1.4 protein of unknown function UPF0153 (RefSeq) compare
DvMF_1526 +0.4 2.6 chromate transporter, chromate ion transporter (CHR) family (RefSeq) compare
DvMF_1509 +0.4 1.1 hypothetical protein (RefSeq) compare
DvMF_2848 +0.4 0.5 CBS domain containing membrane protein (RefSeq) compare
DvMF_0136 +0.4 3.7 hypothetical protein (RefSeq) compare
DvMF_0790 +0.4 1.5 hypothetical protein (RefSeq) compare
DvMF_0117 +0.4 2.2 ABC-3 protein (RefSeq) compare
DvMF_2065 +0.4 1.7 ybaK/ebsC protein (RefSeq) compare
DvMF_2161 +0.4 3.0 transcriptional regulator, MarR family (RefSeq) compare
DvMF_2929 +0.4 2.4 hydroxypyruvate isomerase (RefSeq) compare
DvMF_0867 +0.4 2.2 Redoxin domain protein (RefSeq) compare
DvMF_0267 +0.4 1.2 lipolytic protein G-D-S-L family (RefSeq) compare
DvMF_3025 +0.4 1.1 xanthine-guanine phosphoribosyltransferase (RefSeq) compare
DvMF_1572 +0.4 1.4 flavin reductase domain protein FMN-binding (RefSeq) compare
DvMF_2961 +0.4 2.2 hypothetical protein (RefSeq) compare
DvMF_0644 +0.4 2.0 formate dehydrogenase, beta subunit, putative (RefSeq) compare
DvMF_0645 +0.4 1.8 formate dehydrogenase accessory protein (RefSeq) compare
DvMF_0633 +0.4 2.3 Phosphoglycerate mutase (RefSeq) compare
DvMF_1230 +0.4 2.5 molybdenum cofactor biosynthesis protein A (RefSeq) compare
DvMF_2188 +0.4 1.6 response regulator receiver protein (RefSeq) compare
DvMF_2945 +0.4 1.7 Cupin 2 conserved barrel domain protein (RefSeq) compare
DvMF_1871 +0.4 1.1 Rhodanese domain protein (RefSeq) compare
DvMF_1670 +0.4 1.0 hypothetical protein (RefSeq) compare
DvMF_2972 +0.4 1.6 Glycerophosphodiester phosphodiesterase (RefSeq) compare
DvMF_2013 +0.4 3.3 flagellar biosynthesis protein FlhF, putative (RefSeq) compare
DvMF_2911 +0.4 2.7 flagellar protein FliS (RefSeq) compare
DvMF_0064 +0.4 2.7 histidine kinase (RefSeq) compare
DvMF_1095 +0.4 1.0 hypothetical protein (RefSeq) compare
DvMF_1844 +0.4 1.5 acylneuraminate cytidylyltransferase (RefSeq) compare
DvMF_0299 +0.4 3.6 glycosyl transferase family 9 (RefSeq) compare
DvMF_2314 +0.4 0.9 aminotransferase class IV (RefSeq) compare
DvMF_0794 +0.4 0.8 transcriptional regulator, XRE family (RefSeq) compare
DvMF_2110 +0.4 1.7 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) compare
DvMF_3009 +0.4 0.9 oxidoreductase FAD/NAD(P)-binding domain protein (RefSeq) compare
DvMF_1051 +0.4 0.8 TPR repeat-containing protein (RefSeq) compare
DvMF_0689 +0.4 1.6 polysaccharide export protein, PEP-CTERM sytem-associated (RefSeq) compare
DvMF_0250 +0.4 3.4 CgeB family protein (RefSeq) compare
DvMF_1594 +0.4 0.8 NADH-quinone oxidoreductase, B subunit (RefSeq) compare
DvMF_0683 +0.4 0.9 FemAB-related protein, PEP-CTERM system-associated (RefSeq) compare
DvMF_0781 +0.4 2.3 NLP/P60 protein (RefSeq) compare
DvMF_0338 +0.4 1.5 glycosyl transferase, group 2 family protein (RefSeq) compare
DvMF_1585 +0.4 1.4 CBS domain containing protein (RefSeq) compare
DvMF_2750 +0.4 2.5 Extracellular ligand-binding receptor (RefSeq) compare
DvMF_0702 +0.4 1.0 hypothetical protein (RefSeq) compare
DvMF_0422 +0.4 0.9 PTS system sorbose subfamily IIB component (RefSeq) compare
DvMF_1136 +0.4 1.8 Tetratricopeptide domain protein (RefSeq) compare
DvMF_1358 +0.4 1.5 molybdenum cofactor synthesis domain protein (RefSeq) compare
DvMF_1289 +0.4 0.9 protein of unknown function DUF1320 (RefSeq) compare
DvMF_2212 +0.4 3.1 flagellar basal body-associated protein FliL (RefSeq) compare
DvMF_2543 +0.4 0.9 response regulator receiver protein (RefSeq) compare
DvMF_1980 +0.4 0.7 hypothetical protein (RefSeq) compare
DvMF_1978 +0.4 0.5 hypothetical protein (RefSeq) compare
DvMF_3154 +0.4 2.0 polar amino acid ABC transporter, inner membrane subunit (RefSeq) compare
DvMF_2841 +0.4 1.5 response regulator receiver protein (RefSeq) compare
DvMF_1930 +0.4 1.1 protein of unknown function DUF336 (RefSeq) compare
DvMF_1979 +0.3 1.6 hypothetical protein (RefSeq) compare
DvMF_3010 +0.3 2.6 sigma54 specific transcriptional regulator, Fis family (RefSeq) compare
DvMF_3112 +0.3 0.4 protein of unknown function DUF77 (RefSeq) compare
DvMF_1017 +0.3 0.8 hypothetical protein (RefSeq) compare
DvMF_0252 +0.3 1.6 anti-sigma-factor antagonist (RefSeq) compare
DvMF_2665 +0.3 1.9 hypothetical protein (RefSeq) compare
DvMF_2226 +0.3 1.6 type IV pilus assembly PilZ (RefSeq) compare
DvMF_2137 +0.3 1.7 TRAP dicarboxylate transporter, DctM subunit (RefSeq) compare
DvMF_2151 +0.3 1.7 Lysine exporter protein (LYSE/YGGA) (RefSeq) compare
DvMF_1956 +0.3 2.5 Aldehyde ferredoxin oxidoreductase (RefSeq) compare
DvMF_0880 +0.3 0.9 phosphate uptake regulator, PhoU (RefSeq) compare
DvMF_1131 +0.3 2.1 response regulator receiver sensor signal transduction histidine kinase (RefSeq) compare
DvMF_0249 +0.3 2.8 glycosyl transferase family 9 (RefSeq) compare
DvMF_2272 +0.3 1.3 hypothetical protein (RefSeq) compare
DvMF_1529 +0.3 2.0 UspA domain protein (RefSeq) compare
DvMF_1725 +0.3 1.7 protein of unknown function UPF0150 (RefSeq) compare
DvMF_1532 +0.3 1.3 carboxynorspermidine decarboxylase (RefSeq) compare
DvMF_2553 +0.3 2.5 hypothetical protein (RefSeq) compare
DvMF_2751 +0.3 2.2 inner-membrane translocator (RefSeq) compare
DvMF_1401 +0.3 1.1 lipoyl synthase (RefSeq) compare
DvMF_0864 +0.3 2.8 UTP-GlnB uridylyltransferase, GlnD (RefSeq) compare
DvMF_0857 +0.3 0.9 Cupin 2 conserved barrel domain protein (RefSeq) compare
DvMF_0447 +0.3 1.1 amino acid-binding ACT domain protein (RefSeq) compare
DvMF_1977 +0.3 1.0 CRISPR-associated protein Cas2 (RefSeq) compare
DvMF_0421 +0.3 1.9 hypothetical protein (RefSeq) compare
DvMF_3143 +0.3 2.8 glycosyl transferase family 2 (RefSeq) compare
DvMF_0212 +0.3 2.7 hypothetical protein (RefSeq) compare
DvMF_2952 +0.3 1.5 metal dependent phosphohydrolase (RefSeq) compare
DvMF_2264 +0.3 2.1 DNA binding domain protein, excisionase family (RefSeq) compare
DvMF_2124 +0.3 1.1 Lysine exporter protein (LYSE/YGGA) (RefSeq) compare
DvMF_0700 +0.3 2.2 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_1941 +0.3 1.9 hypothetical protein (RefSeq) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Miyazaki F in rich moyls4 experiments