Experiment set2IT014 for Pseudomonas fluorescens FW300-N2E2

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Sodium propionate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_6061 -5.7 -6.8 Methylisocitrate lyase (EC 4.1.3.30) (from data) conserved
Pf6N2E2_5279 -3.9 -5.2 Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C) conserved
Pf6N2E2_3884 -3.3 -11.1 Histone acetyltransferase HPA2 and related acetyltransferases conserved
Pf6N2E2_4800 -2.1 -10.3 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) conserved
Pf6N2E2_4799 -2.1 -10.6 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) conserved
Pf6N2E2_4801 -2.1 -12.8 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) conserved
Pf6N2E2_424 -1.9 -6.5 Decarboxylase family protein conserved
Pf6N2E2_2533 -1.9 -9.5 Rhodanese domain protein UPF0176 conserved
Pf6N2E2_5538 -1.6 -5.6 4-hydroxybenzoyl-CoA thioesterase family active site compare
Pf6N2E2_3103 -1.5 -6.4 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) conserved
Pf6N2E2_233 -1.3 -6.5 Transcriptional regulator, TetR family compare
Pf6N2E2_1726 +1.1 5.7 3-methylmercaptopropionyl-CoA ligase (DmdB) compare
Pf6N2E2_840 +1.1 5.5 Alcohol dehydrogenase (EC 1.1.1.1) compare
Pf6N2E2_5304 +1.3 8.3 ribosomal subunit interface protein, putative conserved
Pf6N2E2_3268 +1.4 8.6 Ribosome hibernation protein YhbH conserved
Pf6N2E2_1442 +1.6 11.2 Transcriptional regulators of sugar metabolism compare
Pf6N2E2_5760 +2.1 18.3 Sensory box histidine kinase/response regulator conserved
Pf6N2E2_4041 +2.2 20.6 Acetyl-CoA hydrolase (EC 3.1.2.1) conserved
Pf6N2E2_5961 +2.5 14.1 Transcriptional regulator, TetR family conserved
Pf6N2E2_2642 +2.6 18.0 putative patatin-like phospholipase compare
Pf6N2E2_5370 +4.5 32.9 LysR family transcriptional regulator QseA conserved


Specific phenotypes for carbon source Sodium propionate across organisms