Experiment set2IT014 for Azospirillum brasilense Sp245

Compare to:

Sodium butyrate carbon source

200 most important genes:

  gene name fitness t score description  
AZOBR_RS10685 -5.6 -3.4 ATP phosphoribosyltransferase compare
AZOBR_RS01665 -5.1 -15.6 imidazoleglycerol-phosphate dehydratase compare
AZOBR_RS19500 -5.1 -7.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AZOBR_RS01680 -5.1 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AZOBR_RS09540 -5.0 -3.1 5 10-methylenetetrahydrofolate reductase compare
AZOBR_RS03855 -4.8 -11.0 prephenate dehydratase compare
AZOBR_RS04335 -4.7 -5.1 phosphoribosylformylglycinamidine synthase compare
AZOBR_RS01690 -4.5 -11.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AZOBR_RS00525 -4.5 -4.7 tryptophan synthase subunit beta compare
AZOBR_RS03545 -4.5 -6.1 isopropylmalate isomerase compare
AZOBR_RS07450 -4.1 -4.9 indole-3-glycerol-phosphate synthase compare
AZOBR_RS20485 -4.1 -12.2 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) compare
AZOBR_RS12155 -4.0 -9.5 2-isopropylmalate synthase compare
AZOBR_RS00520 -4.0 -6.9 tryptophan synthase subunit alpha compare
AZOBR_RS33395 -3.9 -8.8 NAD-dependent dehydratase compare
AZOBR_RS02140 -3.8 -8.9 O-succinylhomoserine sulfhydrylase compare
AZOBR_RS02410 -3.6 -9.0 DNA-binding protein compare
AZOBR_RS02405 -3.5 -12.1 isocitrate lyase compare
AZOBR_RS03845 -3.4 -9.2 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (from data) compare
AZOBR_RS09435 -3.4 -9.1 3'-5'-bisphosphate nucleotidase compare
AZOBR_RS05755 -3.3 -5.5 Butyryl-CoA dehydrogenase (EC 1.3.8.1) (from data) conserved
AZOBR_RS01670 -3.3 -4.8 imidazole glycerol phosphate synthase compare
AZOBR_RS07455 -3.2 -2.9 anthranilate phosphoribosyltransferase compare
AZOBR_RS19510 -3.0 -5.1 hypothetical protein compare
AZOBR_RS01685 -3.0 -6.2 imidazole glycerol phosphate synthase compare
AZOBR_RS10140 -2.9 -4.5 siroheme synthase compare
AZOBR_RS26380 -2.8 -1.9 GntR family transcriptional regulator compare
AZOBR_RS08310 -2.8 -3.9 amidophosphoribosyltransferase compare
AZOBR_RS14135 -2.7 -1.4 isopropylmalate isomerase compare
AZOBR_RS14130 -2.7 -5.6 3-isopropylmalate dehydrogenase compare
AZOBR_RS16290 -2.7 -2.7 phosphoribosylaminoimidazole synthetase compare
AZOBR_RS20575 -2.6 -3.1 aspartate carbamoyltransferase compare
AZOBR_RS09195 -2.6 -4.3 histidine kinase compare
AZOBR_RS09225 -2.5 -4.1 membrane protein compare
AZOBR_RS05340 -2.5 -1.5 septum site-determining protein MinC compare
AZOBR_RS33465 -2.4 -4.2 GDP-mannose 4 6-dehydratase compare
AZOBR_RS18135 -2.4 -3.4 LacI family transcription regulator compare
AZOBR_RS15395 -2.3 -2.6 phytoene synthase compare
AZOBR_RS10125 -2.3 -11.9 sulfite reductase compare
AZOBR_RS13845 -2.3 -1.8 hypothetical protein compare
AZOBR_RS04460 -2.1 -4.3 dihydroorotase compare
AZOBR_RS33830 -2.1 -8.8 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS00860 -2.0 -1.9 elongation factor 4 compare
AZOBR_RS05080 -2.0 -2.9 orotate phosphoribosyltransferase compare
AZOBR_RS12780 -1.9 -1.1 2-phenylethanol ABC transporter ATP-binding protein compare
AZOBR_RS03135 -1.9 -1.1 orotidine 5'-phosphate decarboxylase compare
AZOBR_RS29175 -1.9 -7.3 IclR family transcriptional regulator compare
AZOBR_RS17140 -1.9 -2.6 putative low-affinity phosphate transport accessory protein compare
AZOBR_RS33565 -1.9 -5.3 UDP-N-acetyl-D-galactosamine dehydrogenase compare
AZOBR_RS28125 -1.8 -1.8 3-carboxy-cis cis-muconate cycloisomerase compare
AZOBR_RS01850 -1.7 -1.0 hypothetical protein compare
AZOBR_RS09535 -1.7 -9.8 ArsR family transcriptional regulator compare
AZOBR_RS08650 -1.7 -4.7 cystathionine beta-lyase compare
AZOBR_RS03240 -1.6 -0.7 recombinase XerD compare
AZOBR_RS09455 -1.6 -4.3 glycogen branching protein compare
AZOBR_RS25870 -1.5 -2.2 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS15055 -1.5 -2.5 muraminidase compare
AZOBR_RS06370 -1.5 -1.5 hypothetical protein compare
AZOBR_RS30685 -1.5 -5.5 DNA polymerase compare
AZOBR_RS22295 -1.5 -1.6 methylcrotonoyl-CoA carboxylase compare
AZOBR_RS10150 -1.5 -5.3 sulfate adenylyltransferase compare
AZOBR_RS21705 -1.5 -3.6 2-aminobenzoate-CoA ligase compare
AZOBR_RS33820 -1.5 -6.9 hypothetical protein compare
AZOBR_RS08750 -1.4 -1.5 hypothetical protein compare
AZOBR_RS09925 -1.4 -7.0 membrane protein compare
AZOBR_RS04600 -1.4 -1.4 phosphate acetyltransferase compare
AZOBR_RS01775 -1.4 -2.2 DNA polymerase III subunit epsilon compare
AZOBR_RS20300 -1.4 -1.5 ribonuclease HII compare
AZOBR_RS20510 -1.4 -4.5 alkyl hydroperoxide reductase subunit C compare
AZOBR_RS09030 -1.3 -1.3 metallophosphoesterase compare
AZOBR_RS22205 -1.3 -1.1 DNA helicase compare
AZOBR_RS01345 -1.3 -1.7 Fur family transcriptional regulator compare
AZOBR_RS06565 -1.3 -2.2 acetolactate synthase compare
AZOBR_RS06560 -1.3 -2.4 acetolactate synthase compare
AZOBR_RS09930 -1.3 -2.8 membrane protein compare
AZOBR_RS31775 -1.3 -1.3 hypothetical protein compare
AZOBR_RS13590 -1.3 -5.5 hypothetical protein compare
AZOBR_RS11865 -1.3 -3.9 membrane protein compare
AZOBR_RS28875 -1.3 -1.2 hypothetical protein compare
AZOBR_RS10155 -1.2 -6.8 NodQ bifunctional enzyme compare
AZOBR_RS18785 -1.2 -1.9 conserved hypothetical protein; putative signal peptide compare
AZOBR_RS08700 -1.2 -1.3 Ala-tRNA(Pro) hydrolase compare
AZOBR_RS13705 -1.2 -6.4 hypothetical protein compare
AZOBR_RS06515 -1.2 -0.9 sodium:proton antiporter compare
AZOBR_RS02815 -1.2 -1.6 hypothetical protein compare
AZOBR_RS19465 -1.2 -1.2 dioxygenase compare
AZOBR_RS19535 -1.1 -1.5 septum formation protein Maf compare
AZOBR_RS29190 -1.1 -0.9 hydroxyacid dehydrogenase compare
AZOBR_RS09805 -1.1 -1.8 peptide chain release factor I compare
AZOBR_RS20785 -1.1 -1.2 acetoin utilization protein compare
AZOBR_RS25895 -1.1 -2.1 membrane protein compare
AZOBR_RS06785 -1.1 -1.7 putative dehydrogenase with NAD(P)-binding Rossmann-fold domain compare
AZOBR_RS01815 -1.1 -1.8 16S rRNA methyltransferase compare
AZOBR_RS12865 -1.1 -2.4 hypothetical protein compare
AZOBR_RS20710 -1.1 -2.4 ATPase AAA compare
AZOBR_RS16960 -1.1 -3.3 hypothetical protein compare
AZOBR_RS06375 -1.1 -1.5 hypothetical protein compare
AZOBR_RS13340 -1.1 -1.8 putative DNA binding helix-turn helix protein compare
AZOBR_RS13520 -1.1 -2.1 dihydroorotate dehydrogenase compare
AZOBR_RS19435 -1.1 -1.0 hypothetical protein compare
AZOBR_RS03155 -1.1 -2.1 iron ABC transporter permease compare
AZOBR_RS26630 -1.0 -1.4 ABC transporter permease compare
AZOBR_RS13100 -1.0 -1.6 malonic semialdehyde reductase compare
AZOBR_RS04935 -1.0 -1.3 hypothetical protein compare
AZOBR_RS03880 -1.0 -4.0 recombinase RecR compare
AZOBR_RS02205 -1.0 -1.6 ribonuclease PH compare
AZOBR_RS09185 -1.0 -2.6 hypothetical protein compare
AZOBR_RS20690 -1.0 -3.2 membrane protein compare
AZOBR_RS10790 -1.0 -2.7 membrane protein compare
AZOBR_RS00325 -1.0 -3.0 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS33315 -1.0 -1.6 hypothetical protein compare
AZOBR_RS33755 -1.0 -1.0 D-glycero-D-manno-heptose 1 7-bisphosphate phosphatase compare
AZOBR_RS33470 -1.0 -1.6 sugar ABC transporter permease compare
AZOBR_RS25260 -1.0 -3.3 peroxidase compare
AZOBR_RS01635 -1.0 -1.0 XRE family transcriptional regulator compare
AZOBR_RS13695 -1.0 -3.3 hypothetical protein compare
AZOBR_RS00025 -1.0 -3.4 TPP compare
AZOBR_RS06025 -1.0 -2.0 hydrogenase compare
AZOBR_RS08205 -1.0 -2.0 glycosyl transferase compare
AZOBR_RS28855 -0.9 -0.8 hypothetical protein compare
AZOBR_RS32605 -0.9 -2.8 membrane protein compare
AZOBR_RS29895 -0.9 -1.6 hypothetical protein compare
AZOBR_RS26620 -0.9 -2.8 putative transcriptional regulator GntR family compare
AZOBR_RS33825 -0.9 -2.7 hypothetical protein compare
AZOBR_RS13595 -0.9 -4.2 hypothetical protein compare
AZOBR_RS20000 -0.9 -1.2 DNA repair protein RecO compare
AZOBR_RS12270 -0.9 -2.1 N-acetylmuramoyl-L-alanine amidase compare
AZOBR_RS23610 -0.9 -0.8 hypothetical protein compare
AZOBR_RS19035 -0.9 -1.8 molecular chaperone Hsp33 compare
AZOBR_RS13650 -0.9 -4.0 hypothetical protein compare
AZOBR_RS00815 -0.9 -2.5 putative transcriptional activator compare
AZOBR_RS22270 -0.9 -2.9 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AZOBR_RS01740 -0.9 -1.1 AbrB family transcriptional regulator compare
AZOBR_RS27860 -0.9 -3.1 regulator compare
AZOBR_RS01675 -0.9 -1.1 acetyltransferase compare
AZOBR_RS33935 -0.9 -4.9 hypothetical protein compare
AZOBR_RS32985 -0.9 -2.5 type I secretion protein compare
AZOBR_RS33460 -0.9 -4.1 glycosyl transferase group 1 compare
AZOBR_RS13765 -0.9 -2.4 hypothetical protein compare
AZOBR_RS01810 -0.9 -2.3 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AZOBR_RS11105 -0.8 -1.4 histidine kinase compare
AZOBR_RS13860 -0.8 -1.1 hypothetical protein compare
AZOBR_RS09970 -0.8 -2.1 hypothetical protein compare
AZOBR_RS02025 -0.8 -1.9 transporter compare
AZOBR_RS01180 -0.8 -0.9 peptidase S41 compare
AZOBR_RS25265 -0.8 -1.8 4-hydroxy-4-methyl-2-oxoglutarate aldolase compare
AZOBR_RS01645 -0.8 -0.8 ABC transporter compare
AZOBR_RS01360 -0.8 -2.4 lysine 2 3-aminomutase compare
AZOBR_RS10235 -0.8 -1.5 cobalamin biosynthesis protein CobD compare
AZOBR_RS13580 -0.8 -3.4 hypothetical protein compare
AZOBR_RS06255 -0.8 -5.4 acyl-CoA synthetase compare
AZOBR_RS11870 -0.8 -2.8 peptidase compare
AZOBR_RS03170 -0.8 -2.0 hypothetical protein compare
AZOBR_RS27865 -0.8 -0.8 histidine kinase compare
AZOBR_RS08465 -0.8 -3.3 MarR family transcriptional regulator compare
AZOBR_RS14695 -0.8 -0.9 DctQ (C4-dicarboxylate permease small subunit) compare
AZOBR_RS21545 -0.8 -1.4 short-chain dehydrogenase compare
AZOBR_RS07060 -0.8 -0.9 hypothetical protein compare
AZOBR_RS15380 -0.8 -1.0 hypothetical protein compare
AZOBR_RS21110 -0.8 -2.2 acetyl-COA carboxylase compare
AZOBR_RS10355 -0.8 -1.5 membrane protein compare
AZOBR_RS10505 -0.8 -1.5 ribonuclease H compare
AZOBR_RS21770 -0.8 -4.0 peptide ABC transporter compare
AZOBR_RS13655 -0.8 -3.0 hypothetical protein compare
AZOBR_RS24045 -0.8 -1.1 hypothetical protein compare
AZOBR_RS15125 -0.8 -1.0 hypothetical protein compare
AZOBR_RS20235 -0.8 -3.5 transcriptional regulator compare
AZOBR_RS23415 -0.7 -3.1 C4-dicarboxylate ABC transporter substrate-binding protein compare
AZOBR_RS19515 -0.7 -2.8 ArsC family transcriptional regulator compare
AZOBR_RS02340 -0.7 -0.9 xanthine phosphoribosyltransferase compare
AZOBR_RS27870 -0.7 -6.1 quinoprotein ethanol dehydrogenase compare
AZOBR_RS06625 -0.7 -1.7 heme ABC transporter ATP-binding protein compare
AZOBR_RS12795 -0.7 -2.1 FIST domain containing protein compare
AZOBR_RS14245 -0.7 -2.0 chemotaxis protein compare
AZOBR_RS16775 -0.7 -1.6 hypothetical protein compare
AZOBR_RS27825 -0.7 -1.0 hypothetical protein compare
AZOBR_RS02245 -0.7 -1.5 molecular chaperone DnaJ compare
AZOBR_RS01135 -0.7 -1.0 alkaline phosphatase compare
AZOBR_RS26300 -0.7 -5.1 hypothetical protein compare
AZOBR_RS04400 -0.7 -2.1 DNA repair protein RadC compare
AZOBR_RS09660 -0.7 -1.4 Rubredoxin-2 (modular protein) compare
AZOBR_RS03215 -0.7 -0.6 hypothetical protein compare
AZOBR_RS07495 -0.7 -4.6 peptidylprolyl isomerase compare
AZOBR_RS28060 -0.7 -1.3 hypothetical protein compare
AZOBR_RS20705 -0.7 -2.7 hypothetical protein compare
AZOBR_RS28995 -0.7 -4.9 hypothetical protein compare
AZOBR_RS11360 -0.7 -1.7 transcriptional regulator compare
AZOBR_RS17290 -0.7 -2.0 membrane protein compare
AZOBR_RS04370 -0.7 -2.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
AZOBR_RS26220 -0.7 -1.9 hypothetical protein compare
AZOBR_RS20855 -0.7 -1.3 calpastatin compare
AZOBR_RS32320 -0.7 -1.9 LacI family transcriptional regulator compare
AZOBR_RS15890 -0.7 -1.1 DNA topoisomerase I compare
AZOBR_RS26615 -0.7 -1.8 RNA polymerase compare
AZOBR_RS07810 -0.7 -5.5 poly(3-hydroxyalkanoate) synthetase compare
AZOBR_RS12180 -0.7 -1.6 peptidase S49 compare
AZOBR_RS13710 -0.7 -1.2 hypothetical protein compare
AZOBR_RS30280 -0.7 -2.0 hypothetical protein compare
AZOBR_RS30980 -0.7 -1.8 hypothetical protein compare
AZOBR_RS02365 -0.7 -1.0 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium butyrate in Azospirillum brasilense Sp245

For carbon source Sodium butyrate across organisms