Experiment set2IT011 for Caulobacter crescentus NA1000

Compare to:

Ammonium chloride nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01712 +3.0 24.7 CopY/TcrY family transcriptional repressor compare
CCNA_02103 +2.7 8.4 hypothetical protein compare
CCNA_02000 +2.7 2.5 SSU ribosomal protein S2P compare
CCNA_02646 +2.6 3.9 cell division protein MraZ compare
CCNA_02416 +2.5 10.3 DNA-binding protein HU compare
CCNA_01059 +2.4 18.3 S-layer protein rsaA compare
CCNA_01851 +2.4 16.9 quinol cytochrome oxidase polypeptide II compare
CCNA_00699 +2.4 9.7 LSU ribosomal protein L28P compare
CCNA_01848 +2.4 11.5 quinol cytochrome oxidase polypeptide IV compare
CCNA_03064 +2.4 10.9 PadR-family transcriptional regulator compare
CCNA_00028 +2.4 10.0 TonB-dependent receptor compare
CCNA_01850 +2.3 16.8 quinol cytochrome oxidase polypeptide I compare
CCNA_02025 +2.2 5.3 hypothetical protein compare
CCNA_01849 +2.2 11.5 quinol cytochrome oxidase polypeptide III compare
CCNA_02368 +2.2 15.4 alpha-glucosidase compare
CCNA_01420 +2.2 9.7 NrdR family transcriptional regulator compare
CCNA_01526 +2.2 8.0 flagellar biosynthesis regulatory protein flaF compare
CCNA_01979 +2.2 6.1 LexA repressor compare
CCNA_03252 +2.2 15.6 CopY/TcrY-family transcriptional regulator compare
CCNA_01780 +2.2 15.0 exopolyphosphatase compare
CCNA_01840 +2.2 14.2 MerR-family transcriptional regulator compare
CCNA_03287 +2.2 6.7 PadR-family transcriptional regulator compare
CCNA_01361 +2.1 4.2 PepSY superfamily protein compare
CCNA_02957 +2.1 6.2 ArsR-family transcriptional regulator compare
CCNA_01968 +2.1 6.0 pentapeptide repeats containing protein compare
CCNA_01655 +2.1 10.9 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01801 +2.1 9.9 hypothetical protein compare
CCNA_01804 +2.1 13.2 glutathione peroxidase compare
CCNA_01684 +2.1 10.5 phenylalanine-4-hydroxylase compare
CCNA_01931 +2.1 9.5 TetR-family transcriptional regulator compare
CCNA_00518 +2.1 9.5 LSU ribosomal protein L25P compare
CCNA_03289 +2.0 11.0 HicB-family RNA-binding protein compare
CCNA_01913 +2.0 12.6 MarR-family transcriptional regulator compare
CCNA_03325 +2.0 5.3 hypothetical protein compare
CCNA_03805 +2.0 11.3 PadR-family transcriptional regulator compare
CCNA_01681 +2.0 7.5 RimI-like acetyltransferase compare
CCNA_03519 +2.0 7.9 PadR-family transcriptional regulator compare
CCNA_00264 +2.0 12.4 C4-dicarboxylate transport protein compare
CCNA_03951 +2.0 5.7 hypothetical protein compare
CCNA_03281 +2.0 13.1 AsnC-family transcriptional regulator compare
CCNA_03893 +1.9 3.5 hypothetical protein compare
CCNA_03280 +1.9 15.6 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02644 +1.9 4.2 cell division protein FtsL compare
CCNA_01739 +1.9 8.7 LSU ribosomal protein L9P compare
CCNA_02448 +1.9 12.4 hypothetical protein compare
CCNA_02980 +1.8 11.3 tryptophan 2,3-dioxygenase compare
CCNA_03012 +1.8 9.0 peroxiredoxin compare
CCNA_02616 +1.8 10.8 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01593 +1.8 11.7 Xaa-pro aminopeptidase compare
CCNA_01573 +1.8 7.9 ArsR-family transcriptional regulator compare
CCNA_03123 +1.8 11.3 ArsR-family transcriptional regulator compare
CCNA_03420 +1.8 8.9 hypothetical protein compare
CCNA_00705 +1.8 4.0 hypothetical protein compare
CCNA_02287 +1.8 8.2 TetR-family transcriptional regulator compare
CCNA_01525 +1.8 8.3 flagellar biosynthesis repressor flbT compare
CCNA_03479 +1.8 8.3 MarR-family transcriptional regulator compare
CCNA_01790 +1.7 5.1 protein translocase subunit secG compare
CCNA_00147 +1.7 2.3 hypothetical protein compare
CCNA_00939 +1.7 5.7 MarR-family transcriptional regulator compare
CCNA_00527 +1.7 8.1 hypothetical protein compare
CCNA_01923 +1.7 8.4 ATP-dependent RNA helicase compare
CCNA_00324 +1.7 3.0 ExbD-family protein compare
CCNA_01847 +1.7 10.9 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01453 +1.7 5.0 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_01802 +1.7 3.3 hypothetical protein compare
CCNA_03271 +1.7 10.1 methionine gamma-lyase compare
CCNA_03030 +1.7 7.7 cytochrome c2 compare
CCNA_02728 +1.7 7.5 hypothetical protein compare
CCNA_02447 +1.7 11.2 PspA/IM30 family regulatory protein compare
CCNA_03989 +1.7 12.1 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_00769 +1.7 8.5 TetR family transcriptional regulator compare
CCNA_03612 +1.7 5.4 HTH XRE-family transcriptional regulator compare
CCNA_01242 +1.7 12.0 amino acid permease compare
CCNA_03961 +1.7 3.8 hypothetical protein compare
CCNA_02004 +1.7 2.8 SOS-induced inhibitor of cell division SidA compare
CCNA_02617 +1.6 11.1 histidinol-phosphate aminotransferase compare
CCNA_01094 +1.6 3.4 hypothetical protein compare
CCNA_00684 +1.6 6.0 anti-sigma factor, ChrR-family compare
CCNA_00447 +1.6 6.4 chemotaxis protein cheD compare
CCNA_01619 +1.6 8.1 NYN domain protein compare
CCNA_02379 +1.6 8.8 hypothetical protein compare
CCNA_01406 +1.6 5.8 metal-dependent hydrolase compare
CCNA_03936 +1.6 4.6 hypothetical protein compare
CCNA_R0054 +1.6 2.7 tRNA-Gly compare
CCNA_01186 +1.6 5.9 hypothetical protein compare
CCNA_01541 +1.6 9.1 LysR-family transcriptional regulator compare
CCNA_02338 +1.6 7.4 hypothetical protein compare
CCNA_02081 +1.6 3.6 Sec-independent protein translocase protein tatB compare
CCNA_00441 +1.6 6.6 chemotaxis receiver domain protein cheYI compare
CCNA_02619 +1.6 12.7 stomatin/prohibitin-related protein compare
CCNA_01680 +1.6 7.5 succinylarginine dihydrolase compare
CCNA_02021 +1.6 4.6 hypothetical protein compare
CCNA_01405 +1.6 3.4 GIY-YIG domain protein compare
CCNA_02367 +1.6 9.9 CelR-family transcriptional regulator compare
CCNA_02591 +1.6 3.2 glutaredoxin compare
CCNA_00846 +1.6 13.2 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_00999 +1.6 5.8 PAS-family motility and cell cycle regulatory protein MopJ compare
CCNA_00807 +1.6 2.2 ribonuclease P protein component compare
CCNA_01752 +1.6 7.8 YicC-family protein compare
CCNA_03688 +1.6 6.9 AsnC-family transcriptional regulator compare
CCNA_01575 +1.6 9.4 glucose / sorbosone dehydrogenase compare
CCNA_03379 +1.5 3.6 Cro/CI family transcriptional regulator compare
CCNA_02339 +1.5 8.7 methyltransferase compare
CCNA_01338 +1.5 6.5 glyoxalase family protein compare
CCNA_03702 +1.5 1.4 SSU ribosomal protein S1P compare
CCNA_00895 +1.5 5.6 hypothetical protein compare
CCNA_03108 +1.5 10.4 TonB-dependent outer membrane receptor compare
CCNA_02475 +1.5 9.2 transcriptional regulator vanR compare
CCNA_01414 +1.5 7.4 3-hydroxyisobutyryl-CoA hydrolase compare
CCNA_02252 +1.5 4.3 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_00998 +1.5 7.3 ROS/MUCR transcriptional regulator compare
CCNA_02132 +1.5 5.0 LacI-family transcriptional regulator compare
CCNA_00027 +1.5 2.9 2OG-Fe(II) oxygenase compare
CCNA_03524 +1.5 7.1 di-/tripeptide transporter compare
CCNA_00031 +1.5 6.4 toxin protein VapC compare
CCNA_00945 +1.5 7.0 chemotaxis protein MotD compare
CCNA_01074 +1.5 4.1 entericidin B-like protein compare
CCNA_00675 +1.5 4.3 VapC-like PIN domain ribonuclease compare
CCNA_01679 +1.5 7.6 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01942 +1.5 5.2 Rrf2 family protein compare
CCNA_01193 +1.5 10.0 amylosucrase compare
CCNA_02297 +1.5 6.5 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_R0037 +1.5 5.0 tRNA-Glu compare
CCNA_01926 +1.5 6.3 GGDEF diguanylate cyclase DgcB compare
CCNA_00803 +1.5 5.4 chemotaxis protein cheW compare
CCNA_01235 +1.4 6.7 AcrR-family transcriptional regulator compare
CCNA_01505 +1.4 3.1 hypothetical protein compare
CCNA_01008 +1.4 9.6 urocanate hydratase compare
CCNA_01528 +1.4 6.8 flagellin fljK compare
CCNA_02760 +1.4 2.6 hypothetical protein compare
CCNA_03740 +1.4 7.0 cysteine synthase compare
CCNA_02576 +1.4 7.1 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_01742 +1.4 5.0 hypothetical protein compare
CCNA_00947 +1.4 9.3 flagellar hook protein FlgE compare
CCNA_03043 +1.4 4.4 type IV pilin protein pilA compare
CCNA_01678 +1.4 6.2 arginine N-succinyltransferase, beta chain compare
CCNA_00448 +1.4 7.7 cheU protein compare
CCNA_02698 +1.4 8.1 Inosine-uridine nucleoside N-ribohydrolase compare
CCNA_00962 +1.4 5.8 MarR-family transcriptional regulator compare
CCNA_02614 +1.4 6.4 fumarylacetoacetase superfamily protein compare
CCNA_01731 +1.4 4.0 colicin V production protein CvpA compare
CCNA_03689 +1.4 9.3 alanine dehydrogenase compare
CCNA_00362 +1.4 2.9 zinc uptake regulation protein compare
CCNA_00931 +1.4 9.3 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_02067 +1.4 6.6 conserved membrane spanning protein compare
CCNA_01677 +1.4 6.1 carboxypeptidase G2 precursor compare
CCNA_03762 +1.4 2.7 acetolactate synthase-related protein compare
CCNA_02560 +1.4 7.7 stalk cross-band protein StpC compare
CCNA_02073 +1.3 4.1 cupin domain transcriptional regulator compare
CCNA_01276 +1.3 4.6 cytochrome c5 compare
CCNA_01173 +1.3 7.2 chorismate mutase compare
CCNA_02942 +1.3 3.2 nucleoside-diphosphate-sugar epimerase compare
CCNA_03635 +1.3 1.1 hypothetical protein compare
CCNA_01025 +1.3 7.5 hypothetical protein compare
CCNA_03215 +1.3 7.9 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_03622 +1.3 6.7 beta-lactamase repressor compare
CCNA_01020 +1.3 6.1 LacI-family transcriptional regulator compare
CCNA_01608 +1.3 5.1 TetR-family transcriptional regulator compare
CCNA_00352 +1.3 7.3 integral membrane protein compare
CCNA_03949 +1.3 4.7 hypothetical protein compare
CCNA_01536 +1.3 4.9 hypothetical protein compare
CCNA_02567 +1.3 8.8 sensory transduction histidine kinase pleC compare
CCNA_02419 +1.3 4.1 TonB1 protein compare
CCNA_02125 +1.3 9.0 polar development protein podJ compare
CCNA_00079 +1.3 3.8 MerR-family transcriptional regulator compare
CCNA_00368 +1.3 7.0 phosphonates transport system permease protein phnE compare
CCNA_01266 +1.3 7.0 NTF2 superfamily protein compare
CCNA_02328 +1.3 1.1 cell cycle regulatory protein GcrA compare
CCNA_02805 +1.3 5.0 hypothetical protein compare
CCNA_02976 +1.3 4.8 MCP-signal associated domain protein compare
CCNA_00438 +1.3 3.3 hypothetical protein compare
CCNA_00847 +1.3 6.2 leucine-responsive regulatory protein compare
CCNA_01393 +1.3 9.0 soluble lytic murein transglycosylase compare
CCNA_02534 +1.3 1.9 hypothetical protein compare
CCNA_03155 +1.3 7.7 PepSY-associated transmembrane protein compare
CCNA_02363 +1.3 6.4 hypothetical protein compare
CCNA_00919 +1.3 4.7 hypothetical protein compare
CCNA_00440 +1.3 3.8 STAS domain protein compare
CCNA_03938 +1.3 2.9 hypothetical protein compare
CCNA_03832 +1.3 5.0 TetR-family transcriptional regulator compare
CCNA_00207 +1.3 6.0 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_00929 +1.3 7.5 Riboflavin-specific deaminase family protein compare
CCNA_02554 +1.3 5.9 hypothetical protein compare
CCNA_00872 +1.3 3.2 glutaredoxin compare
CCNA_01820 +1.2 7.1 GTP-binding protein hflX compare
CCNA_03371 +1.2 4.5 bacterioferritin compare
CCNA_00648 +1.2 8.7 nitrate response regulator NasT compare
CCNA_03214 +1.2 5.9 hypothetical protein compare
CCNA_00992 +1.2 8.3 hypothetical protein compare
CCNA_03964 +1.2 1.7 hypothetical protein compare
CCNA_01057 +1.2 7.4 hypothetical protein compare
CCNA_02843 +1.2 2.3 toxin protein parE-3 compare
CCNA_01184 +1.2 5.9 MutT/nudix family hydrolase compare
CCNA_01954 +1.2 2.6 ribonuclease E compare
CCNA_03156 +1.2 4.8 putative periplasmic protein compare
CCNA_02387 +1.2 8.7 glutathione reductase compare
CCNA_00954 +1.2 7.3 AAA-family response regulator flbD compare
CCNA_01375 +1.2 3.9 lactoylglutathione lyase compare
CCNA_00072 +1.2 6.9 hypothetical protein compare
CCNA_03400 +1.2 1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Caulobacter crescentus NA1000 in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms