Experiment set2IT010 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with Cisplatin 0.006 mg/ml

Genes with specific phenotypes:

  gene name fitness t score description  
AO353_20545 -2.9 -9.7 excinuclease ABC subunit B conserved
AO353_06855 -2.8 -11.1 ABC-ATPase UvrA conserved
AO353_00435 -2.6 -11.5 transcription-repair coupling factor conserved
AO353_05660 -2.3 -7.1 DNA repair protein RecN conserved
AO353_24750 -2.2 -7.0 DNA damage response nuclease (from data) conserved
AO353_02390 -2.2 -8.1 aminopeptidase conserved
AO353_14885 -2.0 -5.2 glutamine ABC transporter ATP-binding protein compare
AO353_16430 -1.8 -6.6 cysteine sulfinate desulfinase compare
AO353_18430 -1.8 -7.3 ATP-dependent DNA helicase RecQ conserved
AO353_10480 -1.8 -7.0 recombinase RecF conserved
AO353_29350 -1.7 -9.6 DNA polymerase II conserved
AO353_05205 -1.7 -9.9 peptidase PmbA conserved
AO353_24755 -1.7 -6.8 ATP-dependent DNA helicase conserved
AO353_06780 -1.7 -10.5 DNA repair helicase Lhr (from data) conserved
AO353_18520 -1.5 -5.6 phosphoesterase compare
AO353_04940 -1.5 -5.3 hypothetical protein compare
AO353_02560 -1.5 -7.3 recombinase RmuC compare
AO353_05215 -1.5 -7.6 protease TldD conserved
AO353_00720 -1.5 -5.3 chromosome segregation protein SMC compare
AO353_08560 -1.5 -5.4 spermidine/putrescine ABC transporter permease conserved
AO353_19235 -1.4 -5.3 DNA damage response gene with a putative DNA binding domain (PA0922-like) (from data) conserved
AO353_02780 -1.3 -5.4 tRNA 2-thiocytidine biosynthesis protein TtcA conserved
AO353_18530 -1.3 -5.5 chromosome segregation protein ScpA compare
AO353_07725 -1.2 -5.2 hypothetical protein compare
AO353_24010 -1.0 -5.5 Rhizobactin siderophore biosynthesis protein RhbE compare
AO353_23995 +1.4 6.6 2,3-dihydroxybenzoate-AMP ligase compare
AO353_04400 +1.8 9.0 transporter conserved
AO353_21480 +1.8 7.6 Cro/Cl family transcriptional regulator compare
AO353_09195 +2.9 12.4 aldehyde dehydrogenase compare


Specific phenotypes for stress Cisplatin across organisms