Experiment set2IT009 for Synechococcus elongatus PCC 7942

Compare to:

Light Dark first sampling rep2

200 most detrimental genes:

  gene name fitness t score description  
Synpcc7942_0402 +1.0 1.1 hypothetical protein compare
Synpcc7942_2018 +0.6 2.1 hypothetical protein compare
Synpcc7942_1541 isiB +0.6 2.5 flavodoxin FldA compare
Synpcc7942_2083 +0.6 2.1 Multiple antibiotic resistance (MarC)-related proteins compare
Synpcc7942_1873 +0.6 2.6 two component transcriptional regulator, winged helix family compare
Synpcc7942_0940 +0.5 2.7 transcriptional regulator, XRE family compare
Synpcc7942_0052 +0.5 2.9 hypothetical protein compare
Synpcc7942_2128 txlA +0.5 1.1 thioredoxin compare
Synpcc7942_0275 +0.4 0.9 hypothetical protein compare
Synpcc7942_2162 +0.4 1.4 hypothetical protein compare
Synpcc7942_0010 +0.4 2.6 hypothetical protein compare
Synpcc7942_2157 +0.4 2.1 hypothetical protein compare
Synpcc7942_2487 +0.4 1.6 hypothetical protein compare
Synpcc7942_1196 sipA +0.4 1.9 hypothetical protein compare
Synpcc7942_1547 +0.4 1.2 hypothetical protein compare
Synpcc7942_0117 +0.4 2.2 thiol methyltransferase 1-like compare
Synpcc7942_0192 ycf60 +0.3 2.0 conserved hypothetical protein YCF60 compare
Synpcc7942_2347 +0.3 2.9 hypothetical protein compare
Synpcc7942_1134 +0.3 0.9 hypothetical protein compare
Synpcc7942_0403 +0.3 1.7 hypothetical protein compare
Synpcc7942_1561 +0.3 2.1 hypothetical protein compare
Synpcc7942_1560 +0.3 1.3 hypothetical protein compare
Synpcc7942_1646 +0.3 2.1 hypothetical protein compare
Synpcc7942_0509 +0.3 2.3 hypothetical protein compare
Synpcc7942_0265 +0.3 1.8 hypothetical protein compare
Synpcc7942_0218 +0.3 0.8 hypothetical protein compare
Synpcc7942_1991 mscL +0.3 0.9 large conductance mechanosensitive channel protein compare
Synpcc7942_1702 +0.3 1.5 hypothetical protein compare
Synpcc7942_0532 +0.3 1.5 hypothetical protein compare
Synpcc7942_1952 +0.3 1.6 hypothetical protein compare
Synpcc7942_1777 +0.3 1.7 hypothetical protein compare
Synpcc7942_1989 +0.3 2.1 cation diffusion facilitator family transporter compare
Synpcc7942_2479 +0.3 2.0 pilin-like protein compare
Synpcc7942_R0031 tRNA-Arg +0.3 0.9 tRNA-Arg compare
Synpcc7942_1207 +0.3 1.7 Addiction module toxin, Txe/YoeB compare
Synpcc7942_0510 serB +0.3 2.1 2-hydroxy-3-keto-5-methylthiopentenyl-1- phosphate phosphatase compare
Synpcc7942_0855 pixG +0.3 1.8 response regulator receiver domain protein (CheY-like) compare
Synpcc7942_0425 +0.3 1.0 hypothetical protein compare
Synpcc7942_0013 +0.3 2.1 hypothetical protein compare
Synpcc7942_0170 +0.3 0.9 hypothetical protein compare
Synpcc7942_1533 sdhB +0.3 2.2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
Synpcc7942_0360 +0.3 2.4 hypothetical protein compare
Synpcc7942_0732 +0.3 1.7 hypothetical protein compare
Synpcc7942_2547 +0.3 1.4 hypothetical protein compare
Synpcc7942_2139 +0.3 1.4 probable glutathione S-transferase compare
Synpcc7942_1997 hliA +0.3 0.8 high light-inducible protein compare
Synpcc7942_2161 +0.3 1.3 hypothetical protein compare
Synpcc7942_0495 +0.3 1.5 hypothetical protein compare
Synpcc7942_2182 +0.3 0.8 hypothetical protein compare
Synpcc7942_0667 +0.3 1.1 hypothetical protein compare
Synpcc7942_1571 smpX +0.3 1.2 MIP family channel proteins compare
Synpcc7942_1796 +0.3 1.4 hypothetical protein compare
Synpcc7942_0003 purL +0.3 1.5 phosphoribosylformylglycinamidine synthase II compare
Synpcc7942_2276 +0.3 1.7 hypothetical protein compare
Synpcc7942_1006 +0.3 1.9 TPR repeat compare
Synpcc7942_0291 +0.3 0.6 hypothetical protein compare
Synpcc7942_2478 psb28-2 +0.2 1.9 photosystem II reaction center W protein compare
Synpcc7942_1833 +0.2 1.6 hypothetical protein compare
Synpcc7942_1206 +0.2 1.3 hypothetical protein compare
Synpcc7942_2485 +0.2 1.6 hypothetical protein compare
Synpcc7942_1543 +0.2 0.9 putative ribonuclease II compare
Synpcc7942_1632 +0.2 1.2 hypothetical protein compare
Synpcc7942_1039 +0.2 1.2 hypothetical protein compare
Synpcc7942_1871 +0.2 1.5 hypothetical protein compare
Synpcc7942_1370 +0.2 1.6 hypothetical protein compare
Synpcc7942_1650 +0.2 2.2 phosphorylase kinase alpha subunit compare
Synpcc7942_1281 +0.2 1.7 hypothetical protein compare
Synpcc7942_0845 +0.2 1.4 hypothetical protein compare
Synpcc7942_1233 +0.2 1.4 hypothetical protein compare
Synpcc7942_0252 cp12 +0.2 1.3 hypothetical protein compare
Synpcc7942_0217 +0.2 1.7 phosphatase-like compare
Synpcc7942_0432 +0.2 1.7 D-alanyl-D-alanine dipeptidase-like compare
Synpcc7942_2598 +0.2 1.6 hypothetical protein compare
Synpcc7942_1926 +0.2 1.5 hypothetical protein compare
Synpcc7942_0919 +0.2 0.9 hypothetical protein compare
Synpcc7942_1556 +0.2 1.6 hypothetical protein compare
Synpcc7942_0999 +0.2 1.2 hypothetical protein compare
Synpcc7942_1812 +0.2 0.8 hypothetical protein compare
Synpcc7942_1633 +0.2 1.4 hypothetical protein compare
Synpcc7942_1794 +0.2 1.6 succinyldiaminopimelate transaminase compare
Synpcc7942_1806 prxQ-A2 +0.2 1.4 bacterioferritin comigratory protein compare
Synpcc7942_0857 +0.2 1.3 CheW protein compare
Synpcc7942_2578 +0.2 1.4 hypothetical protein compare
Synpcc7942_0774 +0.2 1.6 esterase compare
Synpcc7942_1187 +0.2 1.6 hypothetical protein compare
Synpcc7942_1970 +0.2 0.9 N-acyl-L-amino acid amidohydrolase compare
Synpcc7942_0243 hliC +0.2 0.5 possible high light inducible polypeptide HliC compare
Synpcc7942_0910 +0.2 1.5 hypothetical protein compare
Synpcc7942_0476 clpS +0.2 1.5 ATP-dependent Clp protease adaptor compare
Synpcc7942_1539 +0.2 1.4 hypothetical protein compare
Synpcc7942_0186 +0.2 1.5 possible DNA polymerase compare
Synpcc7942_2391 +0.2 1.4 oxidoreductase-like compare
Synpcc7942_1754 +0.2 0.8 hypothetical protein compare
Synpcc7942_2414 +0.2 1.5 hypothetical protein compare
Synpcc7942_2116 +0.2 1.6 hypothetical protein compare
Synpcc7942_2533 +0.2 1.2 hypothetical protein compare
Synpcc7942_0600 prkE +0.2 1.7 serine/threonine protein kinase compare
Synpcc7942_1397 +0.2 1.5 hypothetical protein compare
Synpcc7942_0650 nat +0.2 1.3 hypothetical protein compare
Synpcc7942_0963 +0.2 1.3 probable methyltransferase compare
Synpcc7942_1221 cheY +0.2 1.1 response regulator receiver domain protein (CheY-like) compare
Synpcc7942_2125 +0.2 1.3 hypothetical protein compare
Synpcc7942_2305 nblR +0.2 0.7 two component transcriptional regulator, winged helix family compare
Synpcc7942_2191 +0.2 1.5 hypothetical protein compare
Synpcc7942_2140 +0.2 1.1 cytidine deaminase compare
Synpcc7942_0167 +0.2 1.0 hypothetical protein compare
Synpcc7942_0407 psaK1 +0.2 1.3 photosystem I reaction center subunit X compare
Synpcc7942_2105 cynD +0.2 1.3 nitrate transport ATP-binding subunits C and D compare
Synpcc7942_1436 +0.2 1.1 hypothetical protein compare
Synpcc7942_1776 +0.2 1.3 hypothetical protein compare
Synpcc7942_2599 +0.2 1.3 hypothetical protein compare
Synpcc7942_0437 +0.2 0.9 putative glutathione peroxidase compare
Synpcc7942_2124 bcp +0.2 1.0 acetylpolyamine aminohydolase compare
Synpcc7942_0975 mraW +0.2 1.4 S-adenosyl-methyltransferase MraW compare
Synpcc7942_2452 +0.2 1.5 Tfp pilus assembly protein PilN-like compare
Synpcc7942_2150 +0.2 1.2 penicillin V acylase precursor. Cysteine peptidase. MEROPS family C59 compare
Synpcc7942_2106 cynB +0.2 1.1 nitrate transport permease compare
Synpcc7942_0615 +0.2 1.2 Rhodanese-like compare
Synpcc7942_0317 +0.2 1.2 hypothetical protein compare
Synpcc7942_0601 +0.2 1.1 hypothetical protein compare
Synpcc7942_0256 ama +0.2 1.4 Peptidase M20D, amidohydrolase compare
Synpcc7942_1028 +0.2 1.4 hypothetical protein compare
Synpcc7942_1117 +0.2 1.2 hypothetical protein compare
Synpcc7942_1720 +0.2 1.3 hypothetical protein compare
Synpcc7942_1367 +0.2 1.5 cytochrome P450 compare
Synpcc7942_1828 +0.2 0.9 hypothetical protein compare
Synpcc7942_2554 hoxW +0.2 1.2 hypothetical protein compare
Synpcc7942_0574 +0.2 1.3 hypothetical protein compare
Synpcc7942_2039 +0.2 1.1 hypothetical protein compare
Synpcc7942_0059 +0.2 0.9 hypothetical protein compare
Synpcc7942_1942 prxQ-A3 +0.2 1.3 bacterioferritin comigratory protein-like compare
Synpcc7942_1844 +0.2 0.4 7-cyano-7-deazaguanine reductase compare
Synpcc7942_2416 srrA +0.2 1.4 two component transcriptional regulator, winged helix family compare
Synpcc7942_0543 +0.2 1.3 hypothetical protein compare
Synpcc7942_0737 +0.2 1.3 hypothetical protein compare
Synpcc7942_1414 +0.2 1.2 ATPase compare
Synpcc7942_1304 +0.2 1.1 hypothetical protein compare
Synpcc7942_2285 gldA +0.2 1.4 glycerol dehydrogenase compare
Synpcc7942_0902 +0.2 1.1 hypothetical protein compare
Synpcc7942_1402 +0.2 0.9 hypothetical protein compare
Synpcc7942_2233 +0.2 1.1 hypothetical protein compare
Synpcc7942_0719 +0.2 1.3 hypothetical protein compare
Synpcc7942_0668 +0.2 0.7 hypothetical protein compare
Synpcc7942_0314 +0.2 1.2 succinate dehydrogenase subunit C compare
Synpcc7942_1205 +0.2 1.1 phage_integrase-like compare
Synpcc7942_2516 +0.2 0.7 hypothetical protein compare
Synpcc7942_2142 sui1 +0.2 1.0 translation initiation factor Sui1 compare
Synpcc7942_1657 +0.2 0.6 hypothetical protein compare
Synpcc7942_1145 +0.2 1.1 Glutaredoxin-related protein compare
Synpcc7942_1961 fbp +0.2 1.2 ferripyochelin binding protein compare
Synpcc7942_2280 +0.2 1.3 TPR repeat compare
Synpcc7942_2080 xfp +0.2 1.3 putative phosphoketolase compare
Synpcc7942_0053 +0.2 0.7 hypothetical protein compare
Synpcc7942_1437 +0.2 0.8 hypothetical protein compare
Synpcc7942_1924 +0.2 1.3 hypothetical protein compare
Synpcc7942_2419 +0.2 1.1 hypothetical protein compare
Synpcc7942_1385 +0.2 0.9 hypothetical protein compare
Synpcc7942_1348 +0.2 0.9 hypothetical protein compare
Synpcc7942_0423 +0.2 0.8 hypothetical protein compare
Synpcc7942_0383 +0.2 0.9 hypothetical protein compare
Synpcc7942_0283 +0.2 1.3 Dihydrouridine synthase TIM-barrel protein nifR3 compare
Synpcc7942_1605 +0.2 1.1 hypothetical protein compare
Synpcc7942_0164 +0.1 1.0 Iojap-related protein compare
Synpcc7942_1506 +0.1 1.0 hypothetical protein compare
Synpcc7942_2422 +0.1 1.2 hypothetical protein compare
Synpcc7942_1498 +0.1 0.9 hypothetical protein compare
Synpcc7942_1986 pqqL +0.1 1.2 processing protease compare
Synpcc7942_2258 avtA +0.1 1.2 valine--pyruvate transaminase compare
Synpcc7942_0076 +0.1 1.0 extracellular solute-binding protein, family 3 compare
Synpcc7942_1361 +0.1 1.0 hypothetical protein compare
Synpcc7942_0830 asnC +0.1 1.3 asparaginyl-tRNA synthetase compare
Synpcc7942_0173 cysQ +0.1 1.2 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase-like compare
Synpcc7942_0311 ksgA +0.1 0.8 dimethyladenosine transferase compare
Synpcc7942_1296 +0.1 1.1 hypothetical protein compare
Synpcc7942_1429 +0.1 0.8 hypothetical protein compare
Synpcc7942_2054 +0.1 1.1 hypothetical protein compare
Synpcc7942_2270 +0.1 1.2 glucanase compare
Synpcc7942_B2631 +0.1 1.2 hypothetical protein compare
Synpcc7942_0735 +0.1 0.9 hypothetical protein compare
Synpcc7942_0083 +0.1 0.6 hypothetical protein compare
Synpcc7942_2546 +0.1 1.1 hypothetical protein compare
Synpcc7942_1208 +0.1 0.3 Prevent-host-death protein compare
Synpcc7942_1467 +0.1 0.9 Heat shock protein DnaJ-like compare
Synpcc7942_2410 +0.1 1.3 adenosine deaminase compare
Synpcc7942_2507 +0.1 0.8 hypothetical protein compare
Synpcc7942_2582 impA +0.1 1.1 myo-inositol-1(or 4)-monophosphatase compare
Synpcc7942_2376 +0.1 0.9 hypothetical protein compare
Synpcc7942_1364 +0.1 0.9 hypothetical protein compare
Synpcc7942_1550 umuC +0.1 1.2 DNA-directed DNA polymerase compare
Synpcc7942_0477 ylmG +0.1 0.6 conserved hypothetical protein YCF19 compare
Synpcc7942_2386 hypD +0.1 1.1 hydrogenase expression/formation protein HypD compare
Synpcc7942_1212 +0.1 1.1 hypothetical protein compare
Synpcc7942_1141 +0.1 1.1 hypothetical protein compare
Synpcc7942_0544 +0.1 0.9 YciI-like protein compare
Synpcc7942_1638 +0.1 0.8 hypothetical protein compare
Synpcc7942_1339 +0.1 0.8 hypothetical protein compare
Synpcc7942_1203 +0.1 0.9 hypothetical protein compare
Synpcc7942_0066 +0.1 1.1 hypothetical protein compare
Synpcc7942_0466 +0.1 1.2 Cellulose synthase (UDP-forming) compare
Synpcc7942_0586 +0.1 0.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Synechococcus elongatus PCC 7942 in light-dark experiments