Experiment set2IT009 for Caulobacter crescentus NA1000

Compare to:

Cytidine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02691 +5.0 22.7 TetR-family transcriptional regulator compare
CCNA_02297 +2.8 13.6 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_01739 +2.1 9.0 LSU ribosomal protein L9P compare
CCNA_02941 +2.1 6.2 transcription elongation factor greA compare
CCNA_00162 +2.1 8.6 hypothetical protein compare
CCNA_01420 +2.0 8.4 NrdR family transcriptional regulator compare
CCNA_02180 +1.9 1.6 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_01059 +1.9 15.6 S-layer protein rsaA compare
CCNA_02081 +1.9 4.3 Sec-independent protein translocase protein tatB compare
CCNA_01525 +1.8 9.8 flagellar biosynthesis repressor flbT compare
CCNA_02026 +1.8 7.5 hypothetical protein compare
CCNA_00962 +1.8 7.3 MarR-family transcriptional regulator compare
CCNA_00648 +1.8 12.9 nitrate response regulator NasT compare
CCNA_01851 +1.8 12.3 quinol cytochrome oxidase polypeptide II compare
CCNA_02025 +1.8 5.1 hypothetical protein compare
CCNA_00517 +1.7 1.9 peptidyl-tRNA hydrolase compare
CCNA_01729 +1.7 4.4 transporter, sodium/bile acid symporter family compare
CCNA_02030 +1.7 5.5 hypothetical protein compare
CCNA_02028 +1.7 2.8 NTF2 superfamily protein compare
CCNA_01848 +1.7 8.8 quinol cytochrome oxidase polypeptide IV compare
CCNA_00161 +1.6 8.3 hypothetical protein compare
CCNA_00699 +1.6 6.9 LSU ribosomal protein L28P compare
CCNA_01849 +1.6 9.7 quinol cytochrome oxidase polypeptide III compare
CCNA_01840 +1.6 12.5 MerR-family transcriptional regulator compare
CCNA_01712 +1.6 11.8 CopY/TcrY family transcriptional repressor compare
CCNA_01850 +1.6 11.7 quinol cytochrome oxidase polypeptide I compare
CCNA_02387 +1.6 11.6 glutathione reductase compare
CCNA_00168 +1.5 10.1 polysaccharide export protein compare
CCNA_02696 +1.5 10.0 AtzE family amidohydrolase compare
CCNA_01751 +1.5 7.2 aminodeoxychorismate lyase compare
CCNA_02103 +1.5 10.0 hypothetical protein compare
CCNA_03281 +1.5 9.8 AsnC-family transcriptional regulator compare
CCNA_00919 +1.5 6.7 hypothetical protein compare
CCNA_00518 +1.5 11.3 LSU ribosomal protein L25P compare
CCNA_01573 +1.5 8.3 ArsR-family transcriptional regulator compare
CCNA_01186 +1.5 7.3 hypothetical protein compare
CCNA_02695 +1.4 5.4 hypothetical protein compare
CCNA_02942 +1.4 3.5 nucleoside-diphosphate-sugar epimerase compare
CCNA_R0054 +1.4 2.9 tRNA-Gly compare
CCNA_00016 +1.4 6.4 molybdopterin converting factor, large subunit compare
CCNA_02270 +1.4 4.8 MarR-family transcriptional regulator compare
CCNA_00163 +1.4 8.3 exopolysaccharide transport family protein compare
CCNA_01801 +1.4 7.2 hypothetical protein compare
CCNA_01790 +1.4 5.0 protein translocase subunit secG compare
CCNA_02644 +1.4 3.6 cell division protein FtsL compare
CCNA_03961 +1.4 3.0 hypothetical protein compare
CCNA_02702 +1.4 9.1 xanthine dehydrogenase small subunit compare
CCNA_01614 +1.4 1.8 hypothetical protein compare
CCNA_00521 +1.4 2.6 antitoxin protein compare
CCNA_00015 +1.3 7.8 molybdenum cofactor biosynthesis protein B compare
CCNA_01742 +1.3 6.3 hypothetical protein compare
CCNA_03401 +1.3 5.3 conserved hypothetical cytosolic protein compare
CCNA_01802 +1.3 4.2 hypothetical protein compare
CCNA_01655 +1.3 7.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_01913 +1.3 8.8 MarR-family transcriptional regulator compare
CCNA_00505 +1.3 7.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_00939 +1.3 5.1 MarR-family transcriptional regulator compare
CCNA_01847 +1.3 8.6 cytochrome c oxidase assembly protein Surf1 compare
CCNA_01780 +1.3 9.0 exopolyphosphatase compare
CCNA_03740 +1.3 7.1 cysteine synthase compare
CCNA_03280 +1.3 11.2 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_02957 +1.3 4.2 ArsR-family transcriptional regulator compare
CCNA_02576 +1.3 8.3 phosphoribosylamidoimidazole-succinocarboxamide synthase compare
CCNA_01541 +1.3 7.6 LysR-family transcriptional regulator compare
CCNA_03064 +1.3 7.4 PadR-family transcriptional regulator compare
CCNA_01526 +1.3 4.9 flagellar biosynthesis regulatory protein flaF compare
CCNA_02467 +1.3 8.2 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_02249 +1.3 4.4 conserved hypothetical cytosolic protein compare
CCNA_03989 +1.3 9.4 MarR-family HTH transcriptional regulator / N-acyltransferase compare
CCNA_01804 +1.2 7.4 glutathione peroxidase compare
CCNA_02701 +1.2 8.6 xanthine dehydrogenase large subunit compare
CCNA_03289 +1.2 5.6 HicB-family RNA-binding protein compare
CCNA_00331 +1.2 8.5 molybdate-binding protein compare
CCNA_00527 +1.2 6.0 hypothetical protein compare
CCNA_00846 +1.2 10.9 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_03858 +1.2 8.7 protein translocase subunit secB compare
CCNA_01691 +1.2 5.2 tRNA/rRNA methyltransferase compare
CCNA_03824 +1.2 6.6 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_00018 +1.2 7.2 molybdenum cofactor biosynthesis protein A compare
CCNA_02980 +1.2 8.5 tryptophan 2,3-dioxygenase compare
CCNA_02700 +1.2 8.2 xanthine dehydrogenase accessory protein XdhC compare
CCNA_01060 +1.2 3.0 type I protein secretion ATP-binding protein RsaD compare
CCNA_R0026 +1.2 1.4 tRNA-Gly compare
CCNA_02745 +1.2 4.4 TetR-family transcriptional regulator compare
CCNA_02021 +1.2 4.8 hypothetical protein compare
CCNA_00670 +1.2 2.0 ABC-type polysaccharide/polyol phosphate transport system, ATPase component compare
CCNA_00207 +1.2 6.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_01242 +1.2 9.2 amino acid permease compare
CCNA_03123 +1.2 7.1 ArsR-family transcriptional regulator compare
CCNA_01684 +1.2 6.5 phenylalanine-4-hydroxylase compare
CCNA_00014 +1.2 7.4 molybdenum cofactor biosynthesis protein C compare
CCNA_02367 +1.2 8.1 CelR-family transcriptional regulator compare
CCNA_01593 +1.2 7.1 Xaa-pro aminopeptidase compare
CCNA_02448 +1.2 9.0 hypothetical protein compare
CCNA_R0037 +1.2 3.4 tRNA-Glu compare
CCNA_02339 +1.2 7.6 methyltransferase compare
CCNA_00164 +1.1 8.8 O-antigen polymerase compare
CCNA_00264 +1.1 7.7 C4-dicarboxylate transport protein compare
CCNA_02687 +1.1 5.9 serine-pyruvate aminotransferase compare
CCNA_03479 +1.1 6.0 MarR-family transcriptional regulator compare
CCNA_01094 +1.1 2.4 hypothetical protein compare
CCNA_01619 +1.1 6.9 NYN domain protein compare
CCNA_02591 +1.1 4.4 glutaredoxin compare
CCNA_00167 +1.1 6.6 metallophosphatase family protein compare
CCNA_02617 +1.1 8.0 histidinol-phosphate aminotransferase compare
CCNA_00895 +1.1 4.5 hypothetical protein compare
CCNA_01173 +1.1 5.8 chorismate mutase compare
CCNA_01752 +1.1 6.6 YicC-family protein compare
CCNA_02619 +1.1 8.8 stomatin/prohibitin-related protein compare
CCNA_01931 +1.1 6.5 TetR-family transcriptional regulator compare
CCNA_02728 +1.1 5.9 hypothetical protein compare
CCNA_00447 +1.1 6.6 chemotaxis protein cheD compare
CCNA_00931 +1.1 7.2 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_03688 +1.1 6.2 AsnC-family transcriptional regulator compare
CCNA_02535 +1.1 0.8 DNA topoisomerase I compare
CCNA_00017 +1.1 4.5 molybdopterin converting factor, small subunit compare
CCNA_02805 +1.1 4.0 hypothetical protein compare
CCNA_01086 +1.1 6.8 GTP-binding protein lepA compare
CCNA_01453 +1.1 3.7 electron transport complex I subunit, NADH-ubiquinone oxidoreductase compare
CCNA_03271 +1.1 7.2 methionine gamma-lyase compare
CCNA_01181 +1.1 5.6 hypothetical protein compare
CCNA_03062 +1.1 7.8 cell wall hydrolase family protein compare
CCNA_03982 +1.1 2.1 hypothetical protein compare
CCNA_01767 +1.1 4.2 cytochrome C family protein compare
CCNA_00011 +1.1 3.3 chaperone protein DnaJ compare
CCNA_03400 +1.1 2.8 hypothetical protein compare
CCNA_02289 +1.1 7.0 MarR/EmrR family transcriptional regulator compare
CCNA_01728 +1.1 5.1 short chain dehydrogenase compare
CCNA_00332 +1.1 5.6 molybdenum transport system permease protein modB compare
CCNA_02338 +1.1 5.9 hypothetical protein compare
CCNA_02447 +1.1 7.5 PspA/IM30 family regulatory protein compare
CCNA_02534 +1.1 2.3 hypothetical protein compare
CCNA_01057 +1.1 7.3 hypothetical protein compare
CCNA_00206 +1.1 3.4 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A compare
CCNA_00705 +1.1 3.4 hypothetical protein compare
CCNA_03325 +1.1 4.2 hypothetical protein compare
CCNA_03252 +1.1 7.0 CopY/TcrY-family transcriptional regulator compare
CCNA_01361 +1.0 2.1 PepSY superfamily protein compare
CCNA_01680 +1.0 6.7 succinylarginine dihydrolase compare
CCNA_00675 +1.0 4.4 VapC-like PIN domain ribonuclease compare
CCNA_00920 +1.0 3.3 hypothetical protein compare
CCNA_02132 +1.0 3.5 LacI-family transcriptional regulator compare
CCNA_02287 +1.0 6.1 TetR-family transcriptional regulator compare
CCNA_01754 +1.0 2.5 transglycosylase associated protein compare
CCNA_02225 +1.0 4.8 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_01575 +1.0 6.7 glucose / sorbosone dehydrogenase compare
CCNA_03516 +1.0 3.6 protoheme IX farnesyltransferase coxE compare
CCNA_01827 +1.0 5.0 cobyric acid synthase CobQ compare
CCNA_03519 +1.0 2.8 PadR-family transcriptional regulator compare
CCNA_01058 +1.0 5.9 helix-turn-helix transcriptional regulator compare
CCNA_03936 +1.0 3.1 hypothetical protein compare
CCNA_03129 +1.0 7.7 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_00684 +1.0 4.2 anti-sigma factor, ChrR-family compare
CCNA_03420 +1.0 6.2 hypothetical protein compare
CCNA_02368 +1.0 7.4 alpha-glucosidase compare
CCNA_03498 +1.0 5.4 MarR-family transcriptional regulator compare
CCNA_00255 +1.0 2.2 esterase compare
CCNA_03689 +1.0 7.7 alanine dehydrogenase compare
CCNA_03108 +1.0 7.7 TonB-dependent outer membrane receptor compare
CCNA_01679 +1.0 6.1 succinylglutamic semialdehyde dehydrogenase compare
CCNA_01942 +1.0 4.4 Rrf2 family protein compare
CCNA_01193 +1.0 7.1 amylosucrase compare
CCNA_00930 +1.0 6.4 riboflavin synthase alpha chain compare
CCNA_03702 +1.0 1.0 SSU ribosomal protein S1P compare
CCNA_03315 +1.0 6.2 molybdopterin biosynthesis MoeA protein compare
CCNA_01375 +1.0 4.2 lactoylglutathione lyase compare
CCNA_02042 +1.0 6.4 trigger factor chaperone compare
CCNA_01731 +1.0 3.8 colicin V production protein CvpA compare
CCNA_03808 +1.0 6.1 organic solvent resistance transport system Ttg2C protein compare
CCNA_02004 +1.0 1.9 SOS-induced inhibitor of cell division SidA compare
CCNA_01505 +1.0 2.4 hypothetical protein compare
CCNA_03951 +1.0 1.9 hypothetical protein compare
CCNA_02760 +1.0 2.8 hypothetical protein compare
CCNA_00925 +1.0 4.8 hypothetical protein compare
CCNA_01295 +1.0 7.0 integral membrane protein compare
CCNA_00448 +1.0 5.2 cheU protein compare
CCNA_03952 +0.9 3.7 hypothetical protein compare
CCNA_01968 +0.9 3.4 pentapeptide repeats containing protein compare
CCNA_02075 +0.9 1.1 peptidoglycan binding endopeptidase DipM compare
CCNA_01608 +0.9 3.7 TetR-family transcriptional regulator compare
CCNA_00443 +0.9 5.4 chemotaxis protein cheW compare
CCNA_02012 +0.9 5.3 metal-dependent hydrolase compare
CCNA_01629 +0.9 5.0 signal peptidase I compare
CCNA_03215 +0.9 7.0 ARO8 family aminotransferase/HTH DNA-binding protein compare
CCNA_01826 +0.9 4.8 vitamin B12 receptor compare
CCNA_02475 +0.9 6.1 transcriptional regulator vanR compare
CCNA_03705 +0.9 1.6 hypothetical protein compare
CCNA_02646 +0.9 1.4 cell division protein MraZ compare
CCNA_01748 +0.9 5.5 methyltransferase compare
CCNA_03012 +0.9 5.6 peroxiredoxin compare
CCNA_03352 +0.9 4.3 YebC/PmpR transcriptional regulator compare
CCNA_00947 +0.9 7.2 flagellar hook protein FlgE compare
CCNA_01235 +0.9 5.2 AcrR-family transcriptional regulator compare
CCNA_01681 +0.9 4.1 RimI-like acetyltransferase compare
CCNA_02616 +0.9 6.0 4-hydroxyphenylpyruvate dioxygenase compare
CCNA_01979 +0.9 2.7 LexA repressor compare
CCNA_03893 +0.9 2.3 hypothetical protein compare
CCNA_02188 +0.9 4.1 PaaI-family thioesterase compare
CCNA_01338 +0.9 5.5 glyoxalase family protein compare
CCNA_03805 +0.9 5.2 PadR-family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Cytidine in Caulobacter crescentus NA1000

For nitrogen source Cytidine across organisms