Experiment set2IT008 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

D-Fructose carbon source

200 most important genes:

  gene name fitness t score description  
BT3933 -5.4 -5.3 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3918 -5.4 -3.7 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT1379 -5.3 -3.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT1843 -5.2 -3.6 adenylosuccinate synthetase (NCBI ptt file) compare
BT3395 -5.1 -5.0 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT2076 -5.1 -8.5 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT3253 -4.9 -3.4 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT3733 -4.9 -9.9 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT1374 -4.9 -5.8 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT2836 -4.8 -14.2 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT3758 -4.8 -4.6 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT3761 -4.7 -4.6 N-succinylglutamate synthase (from data) compare
BT1857 -4.7 -6.4 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT0528 -4.7 -5.5 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT2074 -4.7 -6.4 ketol-acid reductoisomerase (NCBI ptt file) compare
BT2415 -4.6 -7.1 aspartate aminotransferase (NCBI ptt file) compare
BT1758 -4.6 -3.2 fructose transporter (from data) compare
BT2078 -4.6 -8.3 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT3760 -4.6 -5.5 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1859 -4.6 -3.2 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT2837 -4.6 -9.8 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT3193 -4.6 -8.8 putative coenzyme A transferase (NCBI ptt file) compare
BT3936 -4.6 -3.2 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2077 -4.6 -5.4 acetolactate synthase large subunit (NCBI ptt file) compare
BT0892 -4.5 -3.0 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT0530 -4.5 -6.1 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1733 -4.4 -6.8 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT2403 -4.4 -9.0 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT1377 -4.4 -5.2 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT0200 -4.4 -4.3 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT0700 -4.4 -6.0 GTP pyrophosphokinase (NCBI ptt file) compare
BT0202 -4.4 -5.2 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT1153 -4.4 -5.9 phosphoserine aminotransferase (NCBI ptt file) compare
BT1152 -4.3 -4.2 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3361 -4.3 -8.3 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT3549 -4.3 -5.9 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1858 -4.3 -6.6 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT2401 -4.3 -7.7 threonine synthase (NCBI ptt file) compare
BT4211 -4.3 -2.9 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3719 -4.2 -5.7 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT3757 -4.1 -6.9 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3759 -4.1 -9.6 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2402 -4.1 -9.5 homoserine phosphotransferase HomK (from data) compare
BT4699 -4.1 -6.2 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT0529 -4.1 -2.8 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT0527 -4.0 -4.8 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3718 -4.0 -9.2 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT0203 -4.0 -2.7 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT1861 -3.9 -7.4 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT1607 -3.9 -4.6 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1970 -3.9 -6.5 glutamate dehydrogenase (NCBI ptt file) compare
BT0532 -3.9 -6.4 anthranilate synthase component I (NCBI ptt file) compare
BT2389 -3.9 -2.7 putative transport protein (NCBI ptt file) compare
BT3717 -3.8 -5.2 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT3845 -3.8 -5.1 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT2080 -3.7 -5.1 L-cysteine desulfidase cdsB (from data) compare
BT1860 -3.7 -3.6 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3184 -3.7 -12.2 L-aspartate oxidase (NCBI ptt file) compare
BT0533 -3.6 -4.3 tryptophan synthase beta chain (NCBI ptt file) compare
BT0201 -3.6 -4.3 histidinol dehydrogenase (NCBI ptt file) compare
BT1378 -3.5 -4.1 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT1754 -3.5 -7.8 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT2129 -3.5 -7.4 aspartate--ammonia ligase (NCBI ptt file) compare
BT1757 -3.3 -7.8 fructokinase (NCBI ptt file) compare
BT1419 -3.3 -3.9 hypothetical protein (NCBI ptt file) compare
BT1746 -3.3 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1381 -3.3 -6.2 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT2003 -3.2 -2.2 putative membrane peptidase (NCBI ptt file) compare
BT1420 -3.2 -7.3 conserved hypothetical protein (NCBI ptt file) compare
BT1476 -3.2 -5.6 aspartate aminotransferase (NCBI ptt file) compare
BT0891 -3.1 -3.6 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3164 -3.1 -6.0 quinolinate synthetase A (NCBI ptt file) compare
BT0747 -3.1 -4.7 putative phosphatidylinositol-4-phosphate 5-kinase (NCBI ptt file) compare
BT2046 -3.1 -2.1 putative cardiolipin synthetase (NCBI ptt file) compare
BT3394 -3.0 -11.7 putative arginine decarboxylase (NCBI ptt file) compare
BT0738 -3.0 -5.5 serine hydroxymethyltransferase (NCBI ptt file) compare
BT1336 -2.9 -5.5 putative translation initiation inhibitor (NCBI ptt file) compare
BT3320 -2.8 -7.2 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1524 -2.8 -2.6 hypothetical protein (NCBI ptt file) compare
BT4551 -2.7 -3.7 putative GTPase, ThdF family (NCBI ptt file) compare
BT3762 -2.7 -5.4 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT1759 -2.6 -7.7 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT3355 -2.6 -1.8 putative auxin-regulated protein (NCBI ptt file) compare
BT_2008 -2.4 -2.3 hypothetical protein (RefSeq) compare
BT3981 -2.4 -2.2 hypothetical protein (NCBI ptt file) compare
BT3935 -2.3 -6.9 aminotransferase (NCBI ptt file) compare
BT1421 -2.3 -5.6 hypothetical protein (NCBI ptt file) compare
BT2059 -2.2 -2.6 TonB (NCBI ptt file) compare
BT0531 -2.2 -3.3 anthranilate synthase component II (NCBI ptt file) compare
BT3770 -2.2 -3.1 transcriptional regulator (NCBI ptt file) compare
BT4025 -2.2 -2.9 hypothetical protein (NCBI ptt file) compare
BT3806 -2.2 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT2932 -2.1 -4.4 transcriptional regulator (NCBI ptt file) compare
BT1853 -2.1 -2.8 putative sulfatase (NCBI ptt file) compare
BT0651 -2.1 -3.9 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT1972 -2.0 -9.5 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT4258 -2.0 -7.6 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT1979 -1.9 -4.3 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT4339 -1.9 -4.2 glutamine synthetase (NCBI ptt file) compare
BT1747 -1.9 -6.5 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT1608 -1.9 -7.3 capsule biosynthesis protein capA (NCBI ptt file) compare
BT4610 -1.9 -2.8 RecA (NCBI ptt file) compare
BT3866 -1.9 -10.3 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT1380 -1.9 -2.0 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT3035 -1.9 -8.4 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT4382 -1.8 -4.3 hypothetical protein (NCBI ptt file) compare
BT1976 -1.8 -2.4 hypothetical protein (NCBI ptt file) compare
BT1363 -1.8 -2.5 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT1375 -1.7 -6.6 aspartokinase (NCBI ptt file) compare
BT1442 -1.7 -5.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) compare
BT1445 -1.7 -4.5 putative biotin synthesis protein bioC (NCBI ptt file) compare
BT3978 -1.7 -5.5 putative cardiolipin synthetase (NCBI ptt file) compare
BT2546 -1.7 -5.7 transcriptional regulator (NCBI ptt file) compare
BT2843 -1.7 -3.5 integrase (NCBI ptt file) compare
BT2075 -1.7 -3.9 acyl-ACP thioesterase (NCBI ptt file) compare
BT2781 -1.7 -3.2 putative mannose-1-phosphate guanylyltransferase (NCBI ptt file) compare
BT1444 -1.6 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0185 -1.6 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1844 -1.6 -3.3 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT1263 -1.6 -2.3 putative protease I (NCBI ptt file) compare
BT3370 -1.6 -4.2 putative glycosyltransferase yibD (NCBI ptt file) compare
BT4562 -1.5 -2.6 hypothetical protein (NCBI ptt file) compare
BT1446 -1.5 -6.8 dethiobiotin synthetase (NCBI ptt file) compare
BT0900 -1.5 -3.1 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT3168 -1.5 -7.1 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT3911 -1.5 -3.4 malate dehydrogenase (NCBI ptt file) compare
BT3980 -1.5 -1.9 hypothetical protein (NCBI ptt file) compare
BT4490 -1.5 -3.5 hypothetical protein (NCBI ptt file) compare
BT1956 -1.5 -6.5 putative cell surface protein (NCBI ptt file) compare
BT0674 -1.4 -3.1 carboxynorspermidine decarboxylase (NCBI ptt file) compare
BT0648 -1.4 -4.5 molybdopterin biosynthesis protein (NCBI ptt file) compare
BT0618 -1.4 -2.7 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfC (NCBI ptt file) compare
BT1561 -1.4 -2.1 hypothetical protein (NCBI ptt file) compare
BT0885 -1.4 -2.3 putative cation efflux pump (NCBI ptt file) compare
BT1443 -1.4 -5.0 8-amino-7-oxononanoate synthase (NCBI ptt file) compare
BT1953 -1.4 -6.2 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT0649 -1.3 -2.7 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT1915 -1.3 -4.4 pyruvate carboxylase subunit A (NCBI ptt file) compare
p5482_02 -1.3 -3.4 hypothetical protein (NCBI) compare
BT4593 -1.3 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT4265 -1.3 -2.3 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT4098 -1.3 -1.3 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT2010 -1.3 -2.4 hypothetical protein (NCBI ptt file) compare
BT0736 -1.3 -2.0 putative transport protein (NCBI ptt file) compare
BT0122 -1.3 -3.3 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT0650 -1.3 -4.8 thiamine biosynthesis protein ThiC (NCBI ptt file) compare
BT3268 -1.3 -3.0 glucose-inhibited division protein A (NCBI ptt file) compare
BT2116 -1.2 -3.2 conserved hypothetical protein (NCBI ptt file) compare
BT0405 -1.2 -1.8 hypothetical protein (NCBI ptt file) compare
BT0882 -1.2 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0647 -1.2 -2.6 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT4322 -1.2 -3.2 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT0611 -1.2 -2.7 glycosyltransferase (NCBI ptt file) compare
BT1854 -1.2 -1.8 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT1609 -1.2 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0790 -1.2 -2.3 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT0397 -1.1 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1912 -1.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT0199 -1.1 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3894 -1.1 -3.7 putative methyltransferase (NCBI ptt file) compare
BT1944 -1.1 -2.5 putative transposase (NCBI ptt file) compare
BT4452 -1.1 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1270 -1.1 -5.3 putative Na+/H+ antiporter (NCBI ptt file) compare
BT2299 -1.1 -1.9 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4138 -1.1 -4.7 putative aminotransferase (NCBI ptt file) compare
BT4644 -1.1 -2.6 putative anti-sigma factor (NCBI ptt file) compare
BT0188 -1.1 -2.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3232 -1.1 -1.3 gluconate 5-dehydrogenase (NCBI ptt file) compare
BT2006 -1.1 -1.2 hypothetical protein (NCBI ptt file) compare
BT4249 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT0954 -1.1 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT2845 -1.0 -5.3 conserved hypothetical protein (NCBI ptt file) compare
BT1955 -1.0 -6.7 putative cell wall biogenesis protein (NCBI ptt file) compare
BT3371 -1.0 -3.2 putative glycosyltransferase yibD (NCBI ptt file) compare
BT4326 -1.0 -2.0 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4649 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT2742 -1.0 -0.9 integrase, site-specific recombinase (NCBI ptt file) compare
BT3363 -1.0 -1.4 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT1104 -1.0 -1.4 small heat shock protein (NCBI ptt file) compare
BT2597 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT1684 -1.0 -4.2 conserved hypothetical protein (NCBI ptt file) compare
BT3801 -1.0 -2.5 rteB, two-component system response regulator (NCBI ptt file) compare
BT0771 -1.0 -4.1 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT4003 -1.0 -2.2 stationary-phase survival protein SurE (NCBI ptt file) compare
BT4557 -1.0 -4.2 hypothetical protein (NCBI ptt file) compare
BT1065 -1.0 -2.4 hypothetical protein (NCBI ptt file) compare
BT3194 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT2541 -0.9 -4.7 putative calcium-transporting ATPase (NCBI ptt file) compare
BT3405 -0.9 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1203 -0.9 -1.4 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT4774 -0.9 -2.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3783 -0.9 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1353 -0.9 -3.1 glycosyltransferase (NCBI ptt file) compare
BT0475 -0.9 -2.0 putative phosphoheptose isomerase (NCBI ptt file) compare
BT4747 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT1957 -0.9 -4.5 hypothetical protein (NCBI ptt file) compare
BT4612 -0.9 -4.0 conserved hypothetical protein (NCBI ptt file) compare
BT1837 -0.9 -3.7 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT0617 -0.9 -1.6 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) compare
BT3374 -0.9 -4.1 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in carbon source experiments

For carbon source D-Fructose across organisms