Experiment set2IT005 for Dyella japonica UNC79MFTsu3.2

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
ABZR86_RS09635 -7.9 -5.4 phosphoglycerate dehydrogenase compare
ABZR86_RS02230 -7.1 -4.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
ABZR86_RS11570 -6.4 -10.6 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR86_RS06710 -6.2 -6.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABZR86_RS10425 -6.2 -4.2 pyrroline-5-carboxylate reductase compare
ABZR86_RS15945 -6.1 -5.2 dihydroxy-acid dehydratase compare
ABZR86_RS10475 -6.0 -7.1 shikimate kinase compare
ABZR86_RS08700 -5.9 -4.1 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
ABZR86_RS11840 -5.8 -9.7 ATP-dependent DNA helicase RecG compare
ABZR86_RS08010 -5.8 -6.8 phosphoribosylanthranilate isomerase compare
ABZR86_RS10715 -5.8 -13.4 serine hydroxymethyltransferase compare
ABZR86_RS15940 -5.7 -10.3 ketol-acid reductoisomerase compare
ABZR86_RS00660 -5.6 -3.9 recombinase RecA compare
ABZR86_RS06000 -5.6 -5.5 poly(R)-hydroxyalkanoic acid synthase subunit PhaE compare
ABZR86_RS10215 -5.4 -9.0 inositol monophosphatase family protein compare
ABZR86_RS14985 -5.4 -12.0 shikimate dehydrogenase compare
ABZR86_RS07995 -5.4 -6.4 tryptophan synthase subunit alpha compare
ABZR86_RS15935 -5.3 -15.0 biosynthetic-type acetolactate synthase large subunit compare
ABZR86_RS08250 -5.2 -3.6 phosphate signaling complex protein PhoU compare
ABZR86_RS16795 -5.2 -21.6 glutamate synthase large subunit compare
ABZR86_RS14100 -5.2 -7.1 DNA adenine methylase compare
ABZR86_RS02815 -5.1 -18.7 asparagine synthase B compare
ABZR86_RS15960 -5.1 -12.4 3-isopropylmalate dehydratase large subunit compare
ABZR86_RS18675 -5.0 -4.9 phosphoglycerate kinase compare
ABZR86_RS10480 -5.0 -5.9 3-dehydroquinate synthase compare
ABZR86_RS08715 -5.0 -13.8 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
ABZR86_RS06735 -5.0 -5.9 ATP phosphoribosyltransferase compare
ABZR86_RS13515 -4.9 -6.7 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
ABZR86_RS15980 -4.9 -5.8 homoserine kinase (EC 2.7.1.39) (from data) compare
ABZR86_RS08000 -4.9 -15.8 tryptophan synthase subunit beta compare
ABZR86_RS02220 -4.8 -19.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
ABZR86_RS02225 -4.8 -8.3 prephenate dehydratase compare
ABZR86_RS12790 -4.8 -4.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
ABZR86_RS06700 -4.8 -8.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
ABZR86_RS14700 -4.8 -4.6 glucose-6-phosphate dehydrogenase compare
ABZR86_RS12065 -4.8 -9.1 indole-3-glycerol phosphate synthase TrpC compare
ABZR86_RS14690 -4.7 -8.5 phosphogluconate dehydratase compare
ABZR86_RS12070 -4.7 -7.4 anthranilate phosphoribosyltransferase compare
ABZR86_RS08730 -4.7 -11.0 N-acetylornithine carbamoyltransferase compare
ABZR86_RS10830 -4.6 -3.2 Holliday junction branch migration DNA helicase RuvB compare
ABZR86_RS06725 -4.6 -7.7 histidinol-phosphate transaminase compare
ABZR86_RS05885 -4.6 -11.3 LysR substrate-binding domain-containing protein compare
ABZR86_RS09935 -4.6 -3.1 DUF4105 domain-containing protein compare
ABZR86_RS05665 -4.5 -10.9 DNA repair protein RecN compare
ABZR86_RS20980 -4.5 -4.1 hypothetical protein compare
ABZR86_RS15950 -4.5 -8.6 3-isopropylmalate dehydrogenase compare
ABZR86_RS11555 -4.5 -15.4 phosphoenolpyruvate carboxylase compare
ABZR86_RS15975 -4.5 -13.9 threonine synthase (EC 4.2.3.1) (from data) compare
ABZR86_RS10530 -4.5 -2.0 H-NS histone family protein compare
ABZR86_RS06715 -4.4 -8.4 imidazole glycerol phosphate synthase subunit HisH compare
ABZR86_RS18655 -4.4 -5.2 transketolase compare
ABZR86_RS06730 -4.3 -9.9 histidinol dehydrogenase compare
ABZR86_RS00830 -4.3 -10.3 glucose-6-phosphate isomerase compare
ABZR86_RS16045 -4.3 -9.0 N-acetylglucosamine-6-phosphate deacetylase compare
ABZR86_RS08710 -4.2 -10.9 N-acetylcitrulline deacetylase (EC 3.5.1.-) (from data) compare
ABZR86_RS05995 -4.2 -16.9 class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC compare
ABZR86_RS07015 -4.2 -9.7 AraC family transcriptional regulator compare
ABZR86_RS08340 -4.2 -7.5 adenylosuccinate synthase compare
ABZR86_RS16800 -4.2 -13.1 FAD-dependent oxidoreductase compare
ABZR86_RS02245 -4.1 -18.9 excinuclease ABC subunit UvrC compare
ABZR86_RS15970 -4.0 -8.4 2-isopropylmalate synthase compare
ABZR86_RS00910 -4.0 -22.9 excinuclease ABC subunit UvrA compare
ABZR86_RS15025 -4.0 -5.4 tyrosine recombinase XerC compare
ABZR86_RS19030 -4.0 -6.9 cystathionine gamma-synthase compare
ABZR86_RS05895 -4.0 -14.0 phosphoadenylyl-sulfate reductase compare
ABZR86_RS09750 -4.0 -23.6 excinuclease ABC subunit UvrB compare
ABZR86_RS06720 -4.0 -6.5 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
ABZR86_RS15460 -3.9 -2.7 type I glutamate--ammonia ligase compare
ABZR86_RS15955 -3.9 -5.8 3-isopropylmalate dehydratase small subunit compare
ABZR86_RS16610 -3.8 -6.3 hypothetical protein compare
ABZR86_RS17085 -3.8 -5.9 type II 3-dehydroquinate dehydratase compare
ABZR86_RS16965 -3.8 -14.8 DNA helicase II compare
ABZR86_RS02880 -3.8 -12.6 sulfate ABC transporter substrate-binding protein compare
ABZR86_RS16050 -3.8 -14.4 SIS domain-containing protein compare
ABZR86_RS12605 -3.7 -3.6 thioredoxin TrxA compare
ABZR86_RS18615 -3.7 -2.5 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABZR86_RS20150 -3.7 -3.2 PilZ domain-containing protein compare
ABZR86_RS19560 -3.7 -6.9 aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) (from data) compare
ABZR86_RS08685 -3.7 -8.5 glutamate 5-kinase compare
ABZR86_RS07660 -3.7 -6.0 exodeoxyribonuclease V subunit gamma compare
ABZR86_RS15515 -3.7 -6.8 nitrogen regulation protein NR(I) compare
ABZR86_RS19800 -3.6 -12.1 RNase adapter RapZ compare
ABZR86_RS08040 -3.6 -8.9 chorismate synthase compare
ABZR86_RS21575 -3.6 -10.9 [protein-PII] uridylyltransferase compare
ABZR86_RS02890 -3.6 -8.6 sulfate ABC transporter permease subunit CysW compare
ABZR86_RS08705 -3.6 -9.3 N-acetylglutamate synthase; N-acetylglutamate kinase (EC 2.3.1.1; EC 2.7.2.8) (from data) compare
ABZR86_RS06630 -3.6 -4.8 phosphopyruvate hydratase compare
ABZR86_RS08680 -3.6 -12.1 glutamate-5-semialdehyde dehydrogenase compare
ABZR86_RS05890 -3.6 -16.2 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase compare
ABZR86_RS11845 -3.5 -12.1 RidA family protein compare
ABZR86_RS19025 -3.5 -5.3 homoserine O-succinyltransferase compare
ABZR86_RS19235 -3.5 -4.1 phosphoribosylformylglycinamidine synthase compare
ABZR86_RS07590 -3.5 -15.9 methionine synthase compare
ABZR86_RS10840 -3.5 -3.4 Holliday junction branch migration protein RuvA compare
ABZR86_RS15315 -3.5 -10.7 phenylalanine 4-monooxygenase compare
ABZR86_RS08905 -3.5 -10.8 carbonate dehydratase compare
ABZR86_RS08695 -3.5 -10.0 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
ABZR86_RS19860 -3.4 -10.2 phosphoribosylglycinamide formyltransferase compare
ABZR86_RS15985 -3.4 -8.7 homoserine dehydrogenase compare
ABZR86_RS07585 -3.4 -10.7 homocysteine S-methyltransferase family protein compare
ABZR86_RS06705 -3.4 -6.8 imidazole glycerol phosphate synthase subunit HisF compare
ABZR86_RS09885 -3.4 -2.3 trypsin-like peptidase domain-containing protein compare
ABZR86_RS15965 -3.4 -8.3 branched-chain amino acid transaminase compare
ABZR86_RS07020 -3.4 -9.3 NAD(P)-dependent alcohol dehydrogenase compare
ABZR86_RS12180 -3.4 -17.1 anthranilate synthase component I compare
ABZR86_RS06590 -3.4 -3.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABZR86_RS13850 -3.3 -7.2 phosphoribosylamine--glycine ligase compare
ABZR86_RS12780 -3.3 -5.1 pteridine reductase compare
ABZR86_RS02885 -3.3 -13.2 sulfate ABC transporter permease subunit CysT compare
ABZR86_RS05875 -3.3 -5.8 cysteine synthase A compare
ABZR86_RS05550 -3.2 -3.1 lipopolysaccharide assembly protein LapB compare
ABZR86_RS06775 -3.2 -15.2 amidophosphoribosyltransferase compare
ABZR86_RS12215 -3.2 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABZR86_RS19225 -3.2 -5.2 site-specific tyrosine recombinase XerD compare
ABZR86_RS07665 -3.2 -3.7 exodeoxyribonuclease V subunit beta compare
ABZR86_RS01825 -3.2 -13.5 replication-associated recombination protein A compare
ABZR86_RS05900 -3.2 -11.1 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
ABZR86_RS00570 -3.1 -4.2 acetoacetyl-CoA reductase compare
ABZR86_RS05905 -3.1 -6.5 assimilatory sulfite reductase (NADPH) flavoprotein subunit compare
ABZR86_RS21020 -3.1 -12.5 ATP-binding protein compare
ABZR86_RS09145 -3.1 -2.5 hypothetical protein compare
ABZR86_RS06260 -3.1 -5.7 MBL fold metallo-hydrolase compare
ABZR86_RS08015 -3.1 -1.9 tRNA pseudouridine(38-40) synthase TruA compare
ABZR86_RS12885 -3.0 -2.0 magnesium-translocating P-type ATPase compare
ABZR86_RS19725 -3.0 -18.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABZR86_RS00685 -2.8 -2.2 carbon storage regulator CsrA compare
ABZR86_RS02895 -2.8 -6.4 ABC transporter ATP-binding protein compare
ABZR86_RS06355 -2.8 -4.9 folate-binding protein YgfZ compare
ABZR86_RS10710 -2.8 -2.6 transcriptional regulator NrdR compare
ABZR86_RS02450 -2.8 -3.8 hypothetical protein compare
ABZR86_RS11870 -2.7 -13.5 phospholipid-binding protein MlaC compare
ABZR86_RS12005 -2.7 -1.8 ribose-5-phosphate isomerase RpiA compare
ABZR86_RS05635 -2.7 -11.0 sodium:calcium antiporter compare
ABZR86_RS11860 -2.7 -13.2 VacJ family lipoprotein compare
ABZR86_RS07180 -2.7 -5.5 RNA polymerase sigma factor RpoE compare
ABZR86_RS05820 -2.6 -5.9 GntR family transcriptional regulator compare
ABZR86_RS18780 -2.6 -3.0 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase compare
ABZR86_RS16060 -2.5 -15.6 sugar MFS transporter conserved
ABZR86_RS17180 -2.5 -10.8 glycosyltransferase compare
ABZR86_RS18775 -2.5 -2.9 nucleotidyltransferase family protein compare
ABZR86_RS10160 -2.5 -11.6 response regulator transcription factor compare
ABZR86_RS15640 -2.5 -1.7 orotate phosphoribosyltransferase compare
ABZR86_RS13880 -2.4 -3.2 peptide deformylase compare
ABZR86_RS07175 -2.4 -5.0 sigma-E factor negative regulatory protein compare
ABZR86_RS06740 -2.4 -3.7 YerC/YecD family TrpR-related protein compare
ABZR86_RS08845 -2.4 -9.6 DNA repair protein RadA compare
ABZR86_RS06275 -2.3 -3.7 DUF6165 family protein compare
ABZR86_RS19865 -2.3 -4.0 phosphoribosylformylglycinamidine cyclo-ligase compare
ABZR86_RS14285 -2.3 -3.0 antibiotic biosynthesis monooxygenase compare
ABZR86_RS11075 -2.3 -11.2 response regulator compare
ABZR86_RS08305 -2.3 -14.8 aminomethyl-transferring glycine dehydrogenase compare
ABZR86_RS11875 -2.2 -8.3 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR86_RS02185 -2.2 -9.8 tRNA 2-thiouridine(34) synthase MnmA compare
ABZR86_RS11885 -2.2 -5.2 ATP-binding cassette domain-containing protein compare
ABZR86_RS11085 -2.2 -9.2 ATP-binding protein compare
ABZR86_RS18450 -2.2 -2.1 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
ABZR86_RS11995 -2.2 -7.9 5-formyltetrahydrofolate cyclo-ligase compare
ABZR86_RS21480 -2.1 -8.3 arginase family protein compare
ABZR86_RS06270 -2.1 -6.4 glycosyltransferase family 9 protein compare
ABZR86_RS18875 -2.1 -6.2 glycine cleavage system aminomethyltransferase GcvT compare
ABZR86_RS19805 -2.1 -6.0 HPr(Ser) kinase/phosphatase compare
ABZR86_RS12200 -2.1 -6.9 ribulose-phosphate 3-epimerase compare
ABZR86_RS05700 -2.1 -3.7 SsrA-binding protein SmpB compare
ABZR86_RS07215 -2.1 -4.1 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR86_RS17160 -1.9 -8.1 malonic semialdehyde reductase compare
ABZR86_RS09075 -1.9 -1.4 NrsF family protein compare
ABZR86_RS18880 -1.9 -6.6 glycine cleavage system protein GcvH compare
ABZR86_RS11880 -1.9 -3.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR86_RS17390 -1.9 -11.8 VOC family protein compare
ABZR86_RS19795 -1.9 -5.8 PTS sugar transporter subunit IIA compare
ABZR86_RS09845 -1.8 -11.3 DUF1631 domain-containing protein compare
ABZR86_RS15330 -1.8 -8.4 TetR/AcrR family transcriptional regulator compare
ABZR86_RS16770 -1.8 -1.9 phage holin family protein compare
ABZR86_RS01970 -1.8 -11.4 hypothetical protein compare
ABZR86_RS10170 -1.8 -1.6 ATP-binding cassette domain-containing protein compare
ABZR86_RS16345 -1.7 -11.5 NADP-dependent isocitrate dehydrogenase compare
ABZR86_RS06580 -1.7 -2.9 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR86_RS14870 -1.7 -1.3 AAA family ATPase compare
ABZR86_RS07140 -1.7 -5.7 DNA repair protein RecO compare
ABZR86_RS15990 -1.7 -2.7 hypothetical protein compare
ABZR86_RS21420 -1.7 -9.6 alpha/beta fold hydrolase compare
ABZR86_RS20775 -1.6 -5.0 TetR/AcrR family transcriptional regulator compare
ABZR86_RS13245 -1.6 -12.3 DEAD/DEAH box helicase compare
ABZR86_RS14705 -1.6 -7.2 GntR family transcriptional regulator compare
ABZR86_RS09015 -1.6 -5.2 anti-sigma factor compare
ABZR86_RS12835 -1.6 -4.8 DedA family protein compare
ABZR86_RS22135 -1.6 -2.7 hypothetical protein compare
ABZR86_RS18830 -1.6 -6.0 electron transfer flavoprotein-ubiquinone oxidoreductase compare
ABZR86_RS08915 -1.6 -2.0 hypothetical protein compare
ABZR86_RS16160 -1.5 -3.7 hypothetical protein compare
ABZR86_RS20595 -1.5 -2.4 DUF6587 family protein compare
ABZR86_RS19815 -1.5 -10.2 RNA polymerase factor sigma-54 compare
ABZR86_RS10205 -1.5 -5.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
ABZR86_RS06940 -1.5 -7.7 hypothetical protein compare
ABZR86_RS07545 -1.5 -4.6 5'-nucleotidase compare
ABZR86_RS18465 -1.5 -4.1 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR86_RS06030 -1.5 -1.2 transcription termination factor NusA compare
ABZR86_RS15510 -1.4 -5.5 ATP-binding protein compare
ABZR86_RS17425 -1.4 -2.0 16S ribosomal RNA compare
ABZR86_RS02720 -1.4 -3.1 ribonuclease E compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Dyella japonica UNC79MFTsu3.2

For carbon source N-Acetyl-D-Glucosamine across organisms