Experiment set2IT005 for Caulobacter crescentus NA1000

Compare to:

N-Acetyl-D-glucosamine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
CCNA_01037 +13.4 86.1 GntR-family transcriptional regulator compare
CCNA_02133 +5.6 32.5 glucokinase compare
CCNA_03453 +4.8 19.8 AcrR-family transcriptional regulator compare
CCNA_01159 +4.7 29.8 transporter, major facilitator superfamily compare
CCNA_00454 +2.6 15.0 GntR-family transcriptional regulator compare
CCNA_03740 +2.5 13.5 cysteine synthase compare
CCNA_00920 +2.3 4.1 hypothetical protein compare
CCNA_02535 +2.2 2.3 DNA topoisomerase I compare
CCNA_00833 +2.2 2.0 NAD(P)H:quinone oxidoreductase compare
CCNA_00264 +2.2 7.8 C4-dicarboxylate transport protein compare
CCNA_00919 +2.1 11.1 hypothetical protein compare
CCNA_00296 +1.8 7.9 phosphate regulon response regulator PhoB compare
CCNA_03959 +1.8 1.9 hypothetical protein compare
CCNA_01060 +1.7 6.7 type I protein secretion ATP-binding protein RsaD compare
CCNA_00080 +1.7 2.1 LexA-related transcriptional repressor compare
CCNA_02376 +1.7 1.9 hypothetical protein compare
CCNA_01061 +1.6 6.8 type I secretion adaptor protein RsaE compare
CCNA_03672 +1.6 7.3 superoxide dismutase compare
CCNA_03824 +1.5 6.8 2-polyprenylphenol 6-hydroxylase accessory protein UbiB compare
CCNA_03524 +1.5 6.4 di-/tripeptide transporter compare
CCNA_01729 +1.5 2.0 transporter, sodium/bile acid symporter family compare
CCNA_02941 +1.5 4.5 transcription elongation factor greA compare
CCNA_02387 +1.4 10.3 glutathione reductase compare
CCNA_02030 +1.4 3.5 hypothetical protein compare
CCNA_03705 +1.4 2.3 hypothetical protein compare
CCNA_02028 +1.3 1.6 NTF2 superfamily protein compare
CCNA_00852 +1.3 1.7 TetR family transcriptional regulator compare
CCNA_02037 +1.3 5.6 ATP-dependent endopeptidase Lon compare
CCNA_01242 +1.3 10.2 amino acid permease compare
CCNA_R0075 +1.3 2.2 tRNA-Met compare
CCNA_01583 +1.3 1.7 phosphate-binding protein compare
CCNA_03635 +1.3 1.0 hypothetical protein compare
CCNA_03280 +1.3 11.6 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_03281 +1.3 7.2 AsnC-family transcriptional regulator compare
CCNA_01593 +1.2 7.0 Xaa-pro aminopeptidase compare
CCNA_00011 +1.2 2.3 chaperone protein DnaJ compare
CCNA_02012 +1.2 7.2 metal-dependent hydrolase compare
CCNA_00848 +1.2 2.3 leucine-responsive regulatory protein compare
CCNA_03857 +1.2 2.7 Tim44-like domain protein compare
CCNA_02646 +1.2 2.0 cell division protein MraZ compare
CCNA_00897 +1.2 2.1 hypothetical protein compare
CCNA_01168 +1.1 2.2 3-ketoacyl-CoA thiolase compare
CCNA_02299 +1.1 2.7 cell division ATP-binding protein FtsE compare
CCNA_00805 +1.1 1.9 GTP-binding protein YihA compare
CCNA_00767 +1.1 2.9 hypothetical protein compare
CCNA_00334 +1.1 2.9 hypothetical protein compare
CCNA_03954 +1.1 1.6 hypothetical protein compare
CCNA_00255 +1.1 1.6 esterase compare
CCNA_01525 +1.1 4.8 flagellar biosynthesis repressor flbT compare
CCNA_01780 +1.0 7.6 exopolyphosphatase compare
CCNA_01923 +1.0 5.9 ATP-dependent RNA helicase compare
CCNA_03661 +1.0 2.3 hypothetical protein compare
CCNA_01483 +1.0 2.3 hypothetical protein compare
CCNA_00028 +1.0 2.4 TonB-dependent receptor compare
CCNA_00872 +1.0 3.0 glutaredoxin compare
CCNA_01255 +1.0 3.9 hypothetical protein compare
CCNA_03963 +1.0 1.6 hypothetical protein compare
CCNA_03649 +1.0 5.8 Ser/Thr kinase-related phosphotransferase compare
CCNA_01059 +1.0 7.5 S-layer protein rsaA compare
CCNA_00670 +1.0 1.4 ABC-type polysaccharide/polyol phosphate transport system, ATPase component compare
CCNA_01185 +0.9 3.4 hypothetical protein compare
CCNA_02315 +0.9 2.2 Cro/CI-family transcriptional regulator compare
CCNA_00215 +0.9 6.2 SapC surface layer protein compare
CCNA_02270 +0.9 2.9 MarR-family transcriptional regulator compare
CCNA_00847 +0.9 5.1 leucine-responsive regulatory protein compare
CCNA_02480 +0.9 3.1 NAD-dependent benzaldehyde dehydrogenase II compare
CCNA_03858 +0.9 5.6 protein translocase subunit secB compare
CCNA_01449 +0.9 1.4 fructose-1,6-bisphosphatase, FIG superfamily compare
CCNA_03849 +0.9 3.5 fructokinase compare
CCNA_01076 +0.9 2.9 beta/gamma crystallin family protein compare
CCNA_02066 +0.9 3.6 phytoene/squalene synthase family protein compare
CCNA_01287 +0.8 2.1 epoxide hydrolase compare
CCNA_00499 +0.8 3.7 hypothetical protein compare
CCNA_02879 +0.8 0.8 genetic exchange related protein compare
CCNA_03062 +0.8 5.9 cell wall hydrolase family protein compare
CCNA_03861 +0.8 2.6 pyridoxal 5'-phosphate dependent enzyme class III compare
CCNA_01823 +0.8 1.3 hypothetical protein compare
CCNA_01617 +0.8 4.0 acetyltransferase compare
CCNA_01249 +0.8 1.7 ABC-transporter substrate binding protein compare
CCNA_03271 +0.8 6.3 methionine gamma-lyase compare
CCNA_02021 +0.8 3.1 hypothetical protein compare
CCNA_00731 +0.8 3.4 DNA mismatch repair protein mutL compare
CCNA_00389 +0.8 1.0 aminomethyltransferase family protein compare
CCNA_00012 +0.8 3.7 DNA mismatch repair protein MutS compare
CCNA_02250 +0.8 1.3 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_03590 +0.8 2.0 anti-sigma factor NepR compare
CCNA_03876 +0.8 0.7 transcription termination factor rho compare
CCNA_02687 +0.8 4.3 serine-pyruvate aminotransferase compare
CCNA_00570 +0.8 2.4 GntR-family transcriptional regulator compare
CCNA_00505 +0.8 4.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
CCNA_01214 +0.8 1.6 YjgP/YjgQ family membrane permease compare
CCNA_02252 +0.8 0.9 methylcrotonyl-CoA carboxylase carboxyl transferase subunit compare
CCNA_00153 +0.8 2.2 adenine nucleotide exchange factor GrpE compare
CCNA_01032 +0.8 4.4 RNA polymerase ECF-type sigma factor compare
CCNA_03012 +0.8 3.4 peroxiredoxin compare
CCNA_01772 +0.8 2.7 hypothetical protein compare
CCNA_03811 +0.8 4.0 LysR-family transcriptional regulator compare
CCNA_00807 +0.7 0.8 ribonuclease P protein component compare
CCNA_03447 +0.7 2.9 hypothetical protein compare
CCNA_00846 +0.7 6.1 proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase compare
CCNA_02171 +0.7 5.4 nucleoside permease nupC compare
CCNA_02209 +0.7 2.2 quinone oxidoreductase compare
CCNA_02180 +0.7 1.3 iron-sulfur cluster assembly/repair protein ApbC compare
CCNA_02025 +0.7 1.9 hypothetical protein compare
CCNA_03900 +0.7 3.3 hypothetical protein compare
CCNA_01842 +0.7 1.7 hypothetical protein compare
CCNA_02026 +0.7 1.4 hypothetical protein compare
CCNA_03782 +0.7 1.3 cytochrome c biogenesis ATP-binding export protein CcmA compare
CCNA_01653 +0.7 3.2 cyclophilin-type peptidylprolyl cis-trans isomerase compare
CCNA_03439 +0.7 1.5 hypothetical protein compare
CCNA_00243 +0.7 2.1 hypothetical protein compare
CCNA_00207 +0.7 3.7 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
CCNA_03904 +0.7 1.7 hypothetical protein compare
CCNA_03525 +0.7 2.8 hypothetical protein compare
CCNA_00271 +0.7 1.8 hypothetical protein compare
CCNA_00281 +0.7 0.7 methionyl-tRNA formyltransferase compare
CCNA_01851 +0.7 4.7 quinol cytochrome oxidase polypeptide II compare
CCNA_02225 +0.7 2.1 ArsR family/SAM-dependent transcriptional regulator compare
CCNA_01967 +0.7 1.7 hypothetical protein with pentapeptide repeats compare
CCNA_03961 +0.7 2.8 hypothetical protein compare
CCNA_00350 +0.7 0.7 hypothetical protein compare
CCNA_00716 +0.7 1.7 hypothetical protein compare
CCNA_02081 +0.7 2.2 Sec-independent protein translocase protein tatB compare
CCNA_03940 +0.7 1.8 hypothetical protein compare
CCNA_00006 +0.7 3.7 enoyl-CoA hydratase compare
CCNA_01929 +0.7 1.4 hypothetical protein compare
CCNA_03985 +0.7 3.2 hypothetical protein compare
CCNA_02812 +0.7 2.6 glutaredoxin compare
CCNA_02448 +0.7 5.1 hypothetical protein compare
CCNA_03965 +0.7 1.5 hypothetical protein compare
CCNA_03526 +0.7 1.3 hypothetical protein compare
CCNA_01848 +0.7 4.2 quinol cytochrome oxidase polypeptide IV compare
CCNA_02303 +0.7 2.5 cation transport protein chaC compare
CCNA_02249 +0.7 1.6 conserved hypothetical cytosolic protein compare
CCNA_00416 +0.7 2.8 hypothetical protein compare
CCNA_01507 +0.7 3.4 cystine transport system permease protein compare
CCNA_03356 +0.7 2.5 cell division protein ZapA compare
CCNA_02677 +0.6 2.0 glutathione S-transferase compare
CCNA_03891 +0.6 1.4 hypothetical protein compare
CCNA_02318 +0.6 2.1 hypothetical protein compare
CCNA_02840 +0.6 2.4 MecR1 antirepressor protein compare
CCNA_01828 +0.6 2.5 hypothetical protein compare
CCNA_01926 +0.6 3.2 GGDEF diguanylate cyclase DgcB compare
CCNA_03698 +0.6 1.2 putative thiol-disulfide oxidoreductase compare
CCNA_02430 +0.6 2.7 conserved hypothetical cytosolic protein compare
CCNA_02316 +0.6 3.1 hypothetical protein compare
CCNA_02679 +0.6 2.1 conserved transmembrane protein compare
CCNA_01732 +0.6 2.8 DNA repair protein RadA compare
CCNA_01375 +0.6 2.6 lactoylglutathione lyase compare
CCNA_00292 +0.6 0.9 phosphate transport system permease protein pstC compare
CCNA_00274 +0.6 1.6 hypothetical protein compare
CCNA_00149 +0.6 2.4 Cro/CI-family transcriptional regulator compare
CCNA_02760 +0.6 2.3 hypothetical protein compare
CCNA_00876 +0.6 1.5 7,8-dihydro-8-oxoguanine-triphosphatase compare
CCNA_01901 +0.6 2.5 lipoprotein compare
CCNA_01788 +0.6 1.3 hypothetical protein compare
CCNA_01850 +0.6 4.4 quinol cytochrome oxidase polypeptide I compare
CCNA_03992 +0.6 0.5 UDP-glucose 6-dehydrogenase-related protein compare
CCNA_00429 +0.6 1.5 hypothetical protein compare
CCNA_00512 +0.6 2.5 GTP-binding protein, probable translation factor compare
CCNA_03570 +0.6 2.5 repair PSII-family membrane protein compare
CCNA_02597 +0.6 2.7 hypothetical protein compare
CCNA_02132 +0.6 1.7 LacI-family transcriptional regulator compare
CCNA_03893 +0.6 1.8 hypothetical protein compare
CCNA_02702 +0.6 4.2 xanthine dehydrogenase small subunit compare
CCNA_02575 +0.6 2.4 hypothetical protein compare
CCNA_03345 +0.6 1.1 Holliday junction DNA helicase RuvA compare
CCNA_02548 +0.6 3.4 hypothetical protein compare
CCNA_01964 +0.6 1.0 NADH dehydrogenase compare
CCNA_02770 +0.6 1.6 conjugal transfer protein TrbL compare
CCNA_01508 +0.6 3.1 cystine-binding protein compare
CCNA_01152 +0.6 1.4 external DNA uptake/catabolism protein compare
CCNA_02349 +0.6 3.0 nucleoside phosphorylase compare
CCNA_01300 +0.6 2.9 formate dehydrogenase accessory protein fdhD compare
CCNA_03034 +0.6 1.4 hypothetical protein compare
CCNA_00896 +0.6 1.8 hypothetical protein compare
CCNA_03099 +0.6 2.1 hypothetical protein compare
CCNA_02939 +0.6 2.0 hypothetical protein compare
CCNA_00875 +0.6 1.9 Flp/Fap pilin component protein compare
CCNA_02199 +0.6 4.1 methyltransferase compare
CCNA_01245 +0.6 3.2 23S rRNA methyltransferase compare
CCNA_01802 +0.6 1.9 hypothetical protein compare
CCNA_00725 +0.6 2.0 O6-methylguanine-DNA methyltransferase compare
CCNA_03105 +0.6 2.7 DnaJ domain protein compare
CCNA_00020 +0.6 0.9 hypothetical protein compare
CCNA_02847 +0.6 1.5 cytochrome c-type biogenesis protein ccmH compare
CCNA_02664 +0.6 1.3 flagellar assembly regulator FliX compare
CCNA_02110 +0.6 2.2 hypothetical protein compare
CCNA_01044 +0.6 3.1 AcrR-family transcriptional regulator compare
CCNA_01116 +0.6 3.2 histidine protein kinase DivJ compare
CCNA_01174 +0.6 1.8 LysR-family transcriptional regulator compare
CCNA_02960 +0.6 0.9 HTH DNA-binding protein compare
CCNA_02297 +0.6 2.3 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02010 +0.6 1.1 hypothetical protein compare
CCNA_01939 +0.6 2.1 ADP-ribosylglycohydrolase compare
CCNA_02392 +0.6 1.6 SnoaL-like domain protein compare
CCNA_00217 +0.5 0.7 thiol:disulfide interchange protein DsbD compare
CCNA_01011 +0.5 2.8 imidazolonepropionase compare
CCNA_02036 +0.5 1.9 DNA-binding protein HU compare
CCNA_00157 +0.5 1.5 glyoxalase family protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source N-Acetyl-D-Glucosamine in Caulobacter crescentus NA1000

For nitrogen source N-Acetyl-D-Glucosamine across organisms