Experiment set2IT004 for Azospirillum brasilense Sp245

Compare to:

Sodium D,L-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
AZOBR_RS12155 -6.9 -6.7 2-isopropylmalate synthase compare
AZOBR_RS03545 -6.8 -4.7 isopropylmalate isomerase compare
AZOBR_RS19500 -6.3 -5.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AZOBR_RS03855 -6.1 -9.4 prephenate dehydratase compare
AZOBR_RS01665 -6.0 -10.8 imidazoleglycerol-phosphate dehydratase compare
AZOBR_RS04335 -6.0 -4.1 phosphoribosylformylglycinamidine synthase compare
AZOBR_RS20485 -5.8 -12.8 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) compare
AZOBR_RS01670 -5.8 -4.2 imidazole glycerol phosphate synthase compare
AZOBR_RS00525 -5.6 -3.3 tryptophan synthase subunit beta compare
AZOBR_RS01690 -5.5 -8.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AZOBR_RS10685 -5.4 -3.4 ATP phosphoribosyltransferase compare
AZOBR_RS01680 -5.4 -3.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AZOBR_RS31135 -5.3 -5.2 pyruvate phosphate dikinase compare
AZOBR_RS00520 -5.3 -5.2 tryptophan synthase subunit alpha compare
AZOBR_RS16290 -5.1 -3.3 phosphoribosylaminoimidazole synthetase compare
AZOBR_RS07450 -5.0 -3.4 indole-3-glycerol-phosphate synthase compare
AZOBR_RS02140 -4.9 -13.8 O-succinylhomoserine sulfhydrylase compare
AZOBR_RS10140 -4.8 -4.4 siroheme synthase compare
AZOBR_RS09540 -4.8 -3.1 5 10-methylenetetrahydrofolate reductase compare
AZOBR_RS09435 -4.8 -5.5 3'-5'-bisphosphate nucleotidase compare
AZOBR_RS10125 -4.8 -10.9 sulfite reductase compare
AZOBR_RS09535 -4.7 -7.2 ArsR family transcriptional regulator compare
AZOBR_RS00325 -4.4 -5.0 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS05340 -4.3 -1.6 septum site-determining protein MinC compare
AZOBR_RS03845 -4.3 -8.2 Histidinol-phosphatase [alternative form] (EC 3.1.3.15) (from data) compare
AZOBR_RS14135 -4.1 -1.6 isopropylmalate isomerase compare
AZOBR_RS10150 -4.1 -9.5 sulfate adenylyltransferase compare
AZOBR_RS14130 -4.0 -5.4 3-isopropylmalate dehydrogenase compare
AZOBR_RS06435 -3.7 -3.6 NAD synthetase compare
AZOBR_RS26380 -3.6 -2.2 GntR family transcriptional regulator compare
AZOBR_RS05080 -3.5 -2.2 orotate phosphoribosyltransferase compare
AZOBR_RS01685 -3.5 -4.8 imidazole glycerol phosphate synthase compare
AZOBR_RS06515 -3.4 -1.7 sodium:proton antiporter compare
AZOBR_RS33465 -3.4 -3.2 GDP-mannose 4 6-dehydratase compare
AZOBR_RS13520 -3.4 -3.2 dihydroorotate dehydrogenase compare
AZOBR_RS10155 -3.4 -11.9 NodQ bifunctional enzyme compare
AZOBR_RS07940 -3.3 -9.1 phosphomethylpyrimidine synthase compare
AZOBR_RS08310 -3.2 -3.3 amidophosphoribosyltransferase compare
AZOBR_RS04460 -3.2 -4.3 dihydroorotase compare
AZOBR_RS15495 -3.1 -2.8 ABC transporter ATPase compare
AZOBR_RS10130 -3.0 -1.6 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
AZOBR_RS25120 -2.9 -16.3 4Fe-4S ferredoxin compare
AZOBR_RS00025 -2.8 -2.8 TPP compare
AZOBR_RS03240 -2.7 -1.0 recombinase XerD compare
AZOBR_RS07455 -2.7 -1.7 anthranilate phosphoribosyltransferase compare
AZOBR_RS04370 -2.6 -6.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
AZOBR_RS33315 -2.6 -5.2 hypothetical protein compare
AZOBR_RS08650 -2.6 -5.3 cystathionine beta-lyase compare
AZOBR_RS16295 -2.6 -1.6 phosphoribosylglycinamide formyltransferase compare
AZOBR_RS02875 -2.6 -2.4 RNA helicase compare
AZOBR_RS33395 -2.6 -8.3 NAD-dependent dehydratase compare
AZOBR_RS16235 -2.5 -8.5 polyphosphate kinase compare
AZOBR_RS06425 -2.4 -10.8 NAD(P) transhydrogenase subunit alpha compare
AZOBR_RS19515 -2.4 -4.5 ArsC family transcriptional regulator compare
AZOBR_RS33830 -2.4 -9.7 mannose-1-phosphate guanylyltransferase compare
AZOBR_RS09030 -2.3 -1.6 metallophosphoesterase compare
AZOBR_RS15535 -2.3 -1.1 heme biosynthesis protein HemY compare
AZOBR_RS01500 -2.2 -2.1 alanine acetyltransferase compare
AZOBR_RS25870 -2.2 -2.1 glycerol-3-phosphate dehydrogenase compare
AZOBR_RS03155 -2.2 -6.0 iron ABC transporter permease compare
AZOBR_RS02815 -2.1 -2.1 hypothetical protein compare
AZOBR_RS01775 -2.0 -3.3 DNA polymerase III subunit epsilon compare
AZOBR_RS20575 -2.0 -2.1 aspartate carbamoyltransferase compare
AZOBR_RS30505 -1.9 -4.4 transcriptional regulator compare
AZOBR_RS03190 -1.9 -2.9 aerobic cobaltochelatase subunit CobS compare
AZOBR_RS19465 -1.8 -1.6 dioxygenase compare
AZOBR_RS03165 -1.8 -7.3 iron deficiency-induced protein A compare
AZOBR_RS00860 -1.8 -1.7 elongation factor 4 compare
AZOBR_RS19535 -1.8 -1.0 septum formation protein Maf compare
AZOBR_RS06420 -1.8 -1.8 hypothetical protein compare
AZOBR_RS28125 -1.7 -1.4 3-carboxy-cis cis-muconate cycloisomerase compare
AZOBR_RS01345 -1.7 -4.4 Fur family transcriptional regulator compare
AZOBR_RS10315 -1.7 -3.1 fumarate hydratase compare
AZOBR_RS32245 -1.7 -1.5 tRNA-Phe compare
AZOBR_RS14430 -1.7 -1.7 chemotaxis protein CheY compare
AZOBR_RS15015 -1.6 -1.5 dihydroxy-acid dehydratase compare
AZOBR_RS17500 -1.6 -1.6 hypothetical protein compare
AZOBR_RS09455 -1.5 -3.5 glycogen branching protein compare
AZOBR_RS01180 -1.5 -1.8 peptidase S41 compare
AZOBR_RS13845 -1.5 -1.4 hypothetical protein compare
AZOBR_RS15380 -1.5 -2.0 hypothetical protein compare
AZOBR_RS13695 -1.5 -5.6 hypothetical protein compare
AZOBR_RS05770 -1.4 -5.7 2-hydroxyacid dehydrogenase compare
AZOBR_RS20510 -1.4 -4.6 alkyl hydroperoxide reductase subunit C compare
AZOBR_RS31610 -1.4 -2.2 hypothetical protein compare
AZOBR_RS15055 -1.4 -2.3 muraminidase compare
AZOBR_RS16300 -1.4 -1.4 hypothetical protein compare
AZOBR_RS07620 -1.4 -2.8 esterase compare
AZOBR_RS18365 -1.4 -1.1 hypothetical protein compare
AZOBR_RS07145 -1.4 -2.9 peptidase compare
AZOBR_RS09930 -1.4 -1.9 membrane protein compare
AZOBR_RS04600 -1.3 -1.3 phosphate acetyltransferase compare
AZOBR_RS33755 -1.3 -1.1 D-glycero-D-manno-heptose 1 7-bisphosphate phosphatase compare
AZOBR_RS11095 -1.3 -1.6 recombinase RecA compare
AZOBR_RS13590 -1.3 -4.6 hypothetical protein compare
AZOBR_RS24465 -1.3 -1.3 beta-lactamase compare
AZOBR_RS28005 -1.2 -0.8 hypothetical protein compare
AZOBR_RS23090 -1.2 -1.3 Crp/Fnr family transcription regulator compare
AZOBR_RS17930 -1.2 -1.0 hypothetical protein compare
AZOBR_RS09225 -1.2 -2.7 membrane protein compare
AZOBR_RS19110 -1.2 -1.0 PadR family transcripitonal regulator compare
AZOBR_RS07355 -1.2 -1.3 zinc metalloprotease compare
AZOBR_RS28855 -1.2 -0.9 hypothetical protein compare
AZOBR_RS33470 -1.2 -2.0 sugar ABC transporter permease compare
AZOBR_RS29080 -1.2 -0.8 hypothetical protein compare
AZOBR_RS11025 -1.2 -3.7 isocitrate dehydrogenase compare
AZOBR_RS01455 -1.1 -2.8 acyltransferase compare
AZOBR_RS15540 -1.1 -4.2 exodeoxyribonuclease III compare
AZOBR_RS04275 -1.1 -3.2 response regulator compare
AZOBR_RS06940 -1.1 -2.0 glycine cleavage system protein T compare
AZOBR_RS31055 -1.1 -1.4 hypothetical protein compare
AZOBR_RS01720 -1.1 -3.2 preprotein translocase subunit SecB compare
AZOBR_RS17360 -1.1 -3.8 electron transfer flavoprotein compare
AZOBR_RS01135 -1.1 -1.3 alkaline phosphatase compare
AZOBR_RS20220 -1.1 -2.1 acetyl-CoA acetyltransferase compare
AZOBR_RS06560 -1.1 -2.1 acetolactate synthase compare
AZOBR_RS01955 -1.1 -2.4 glycosyltransferase 28 domain protein compare
AZOBR_RS12865 -1.1 -2.3 hypothetical protein compare
AZOBR_RS13525 -1.1 -1.2 glutathione S-transferase compare
AZOBR_RS33035 -1.0 -1.5 transposase compare
AZOBR_RS09165 -1.0 -3.0 hypothetical protein compare
AZOBR_RS29045 -1.0 -2.4 hypothetical protein compare
AZOBR_RS22235 -1.0 -1.4 acyl-CoA thioester hydrolase compare
AZOBR_RS31485 -1.0 -1.9 hypothetical protein compare
AZOBR_RS25895 -1.0 -2.6 membrane protein compare
AZOBR_RS08320 -1.0 -3.0 DNA repair protein RadA compare
AZOBR_RS01570 -1.0 -1.7 hypothetical protein compare
AZOBR_RS13670 -1.0 -3.7 hypothetical protein compare
AZOBR_RS33565 -1.0 -3.2 UDP-N-acetyl-D-galactosamine dehydrogenase compare
AZOBR_RS28895 -1.0 -1.0 hypothetical protein compare
AZOBR_RS03450 -1.0 -1.7 cobalamin synthase compare
AZOBR_RS01130 -1.0 -3.8 phosphate ABC transporter substrate-binding protein compare
AZOBR_RS32455 -1.0 -1.8 phosphate acetyltransferase compare
AZOBR_RS09805 -1.0 -1.6 peptide chain release factor I compare
AZOBR_RS11105 -1.0 -1.4 histidine kinase compare
AZOBR_RS13800 -1.0 -2.2 hypothetical protein compare
AZOBR_RS09195 -1.0 -1.7 histidine kinase compare
AZOBR_RS08530 -1.0 -1.0 4-diphosphocytidyl-2C-methyl-D-erythritol kinase compare
AZOBR_RS31705 -0.9 -1.5 hypothetical protein compare
AZOBR_RS11870 -0.9 -3.5 peptidase compare
AZOBR_RS30685 -0.9 -3.8 DNA polymerase compare
AZOBR_RS33825 -0.9 -2.2 hypothetical protein compare
AZOBR_RS29355 -0.9 -1.1 sensory rhodopsin II transducer compare
AZOBR_RS20710 -0.9 -2.3 ATPase AAA compare
AZOBR_RS27430 -0.9 -1.7 putative ABC transporter substrate-binding periplasmic protein compare
AZOBR_RS07920 -0.9 -0.6 NAD synthetase compare
AZOBR_RS31685 -0.9 -0.9 hypothetical protein compare
AZOBR_RS05065 -0.9 -2.8 hypothetical protein compare
AZOBR_RS11360 -0.9 -1.7 transcriptional regulator compare
AZOBR_RS03170 -0.9 -2.5 hypothetical protein compare
AZOBR_RS06725 -0.9 -1.6 diguanylate phosphodiesterase compare
AZOBR_RS29725 -0.9 -1.0 MarR family transcriptional regulator compare
AZOBR_RS07130 -0.9 -2.5 trigger factor compare
AZOBR_RS09185 -0.9 -1.8 hypothetical protein compare
AZOBR_RS06160 -0.9 -2.8 hypothetical protein compare
AZOBR_RS19960 -0.9 -2.3 hypothetical protein compare
AZOBR_RS22210 -0.9 -2.0 putative isochorismatase hydrolase compare
AZOBR_RS09025 -0.9 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
AZOBR_RS13705 -0.9 -4.8 hypothetical protein compare
AZOBR_RS32320 -0.9 -2.8 LacI family transcriptional regulator compare
AZOBR_RS22200 -0.9 -2.0 AsnC family transcriptional regulator compare
AZOBR_RS28620 -0.9 -1.5 hypothetical protein compare
AZOBR_RS30610 -0.9 -0.8 acetyl-CoA acetyltransferase compare
AZOBR_RS00960 -0.9 -1.9 SAM-dependent methyltransferase compare
AZOBR_RS05110 -0.8 -1.4 hypothetical protein compare
AZOBR_RS30695 -0.8 -1.2 hypothetical protein compare
AZOBR_RS21570 -0.8 -1.5 N-acetylneuraminate synthase compare
AZOBR_RS10885 -0.8 -4.0 hypothetical protein compare
AZOBR_RS00240 -0.8 -0.5 hypothetical protein compare
AZOBR_RS06625 -0.8 -1.8 heme ABC transporter ATP-binding protein compare
AZOBR_RS13765 -0.8 -2.8 hypothetical protein compare
AZOBR_RS09160 -0.8 -1.8 multidrug transporter compare
AZOBR_RS11865 -0.8 -2.4 membrane protein compare
AZOBR_RS14855 -0.8 -1.6 hypothetical protein compare
AZOBR_RS28875 -0.8 -0.9 hypothetical protein compare
AZOBR_RS10135 -0.8 -2.4 uroporphyrin-III methyltransferase compare
AZOBR_RS13770 -0.8 -0.9 hypothetical protein compare
AZOBR_RS02200 -0.8 -2.3 nucleoside-triphosphate diphosphatase compare
AZOBR_RS09035 -0.8 -0.8 transcriptional regulator compare
AZOBR_RS26280 -0.8 -0.5 hypothetical protein compare
AZOBR_RS02205 -0.8 -1.6 ribonuclease PH compare
AZOBR_RS16430 -0.8 -2.9 MarR family transcriptional regulator compare
AZOBR_RS28625 -0.8 -1.5 hypothetical protein compare
AZOBR_RS13595 -0.8 -4.6 hypothetical protein compare
AZOBR_RS12860 -0.8 -2.9 hypothetical protein compare
AZOBR_RS20840 -0.8 -1.6 transposase IS116/IS110/IS902 family compare
AZOBR_RS06840 -0.8 -0.9 hypothetical protein compare
AZOBR_RS22205 -0.8 -0.8 DNA helicase compare
AZOBR_RS13675 -0.8 -4.1 exported protein of unknown function compare
AZOBR_RS16705 -0.8 -1.5 cobalt-precorrin-6x reductase compare
AZOBR_RS33455 -0.8 -2.5 hypothetical protein compare
AZOBR_RS20980 -0.8 -1.3 hypothetical protein compare
AZOBR_RS26305 -0.8 -0.9 hypothetical protein compare
AZOBR_RS20750 -0.8 -1.4 cytochrome B compare
AZOBR_RS03620 -0.8 -0.9 alanyl-tRNA synthetase compare
AZOBR_RS01430 -0.8 -1.3 hypothetical protein compare
AZOBR_RS11845 -0.8 -4.5 N-acetylmuramoyl-L-alanine amidase compare
AZOBR_RS01755 -0.8 -1.7 hypothetical protein compare
AZOBR_RS33545 -0.8 -2.8 hypothetical protein compare
AZOBR_RS33380 -0.8 -2.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum brasilense Sp245 in carbon source experiments

For carbon source Sodium D,L-Lactate across organisms