Experiment set2IT002 for Pseudomonas fluorescens FW300-N2E2

Compare to:

D-Fructose carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_3613 -2.0 -6.0 GTP-binding protein HflX compare
Pf6N2E2_808 -1.0 -5.2 Various polyols ABC transporter, permease component 2 compare
Pf6N2E2_3035 +1.1 5.8 DNA mismatch repair protein MutS compare
Pf6N2E2_2684 +1.2 7.8 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) compare
Pf6N2E2_2524 +1.3 7.5 S-adenosylhomocysteine deaminase (EC 3.5.4.28); Methylthioadenosine deaminase compare
Pf6N2E2_3180 +1.5 7.6 Type IV pilus biogenesis protein PilF compare
Pf6N2E2_2533 +1.5 10.2 Rhodanese domain protein UPF0176 compare
Pf6N2E2_2166 +1.6 10.5 protein of unknown function DUF6, transmembrane compare
Pf6N2E2_5435 +1.6 6.3 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf6N2E2_69 +1.6 8.7 Probable type IV pilus assembly FimV-related transmembrane protein compare
Pf6N2E2_694 +1.7 11.0 Outer membrane protein (porin) compare
Pf6N2E2_2399 +1.8 8.5 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase compare
Pf6N2E2_1386 +1.8 8.2 amino acid ABC transporter, periplasmic substrate-binding protein compare
Pf6N2E2_4357 +2.3 17.6 Nucleoside-diphosphate-sugar epimerases compare
Pf6N2E2_2466 +2.3 11.0 Universal stress protein family compare
Pf6N2E2_4775 +2.4 6.8 Coenzyme PQQ synthesis protein B compare
Pf6N2E2_4980 +2.4 7.0 hypothetical protein compare
Pf6N2E2_2470 +2.7 15.4 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) conserved
Pf6N2E2_4774 +3.0 17.3 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) compare
Pf6N2E2_5365 +3.4 16.7 Heavy metal sensor histidine kinase compare
Pf6N2E2_4772 +3.5 20.4 Coenzyme PQQ synthesis protein E compare
Pf6N2E2_805 +5.5 18.3 Xylulose kinase (EC 2.7.1.17) (from data) conserved
Pf6N2E2_804 +5.9 35.8 Fructokinase (EC 2.7.1.4) conserved
Pf6N2E2_1442 +6.1 39.6 Transcriptional regulators of sugar metabolism compare
Pf6N2E2_806 +7.1 37.6 Multiple polyol-specific dehydrogenase (EC 1.1.1.-) conserved
Pf6N2E2_1002 +8.2 10.9 Myo-inositol 2-dehydrogenase (EC 1.1.1.18) compare
Pf6N2E2_1001 +8.6 8.9 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) compare


Specific phenotypes for carbon source D-Fructose across organisms