Experiment set2IT002 for Pedobacter sp. GW460-11-11-14-LB5

Compare to:

R2A with MreB Perturbing Compound A22 0.04 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA265_RS12890 +1.4 9.7 hypothetical protein compare
CA265_RS21900 +1.3 10.9 two-component sensor histidine kinase compare
CA265_RS25235 +1.3 8.8 hypothetical protein compare
CA265_RS23140 +1.2 5.2 hypothetical protein compare
CA265_RS24780 +1.2 4.7 nucleoside-diphosphate kinase compare
CA265_RS23510 +1.1 4.9 energy transducer TonB compare
CA265_RS12800 +1.1 5.6 NAD(P)H-dependent oxidoreductase compare
CA265_RS23515 +1.0 5.3 hypothetical protein compare
CA265_RS18990 +1.0 8.7 cell surface protein SprA compare
CA265_RS18120 +1.0 7.0 gliding motility protein GldM compare
CA265_RS19740 +0.9 4.0 gliding motility lipoprotein GldD compare
CA265_RS12945 +0.9 6.2 hypothetical protein compare
CA265_RS01205 +0.9 5.1 import component protein compare
CA265_RS21295 +0.9 5.2 hypothetical protein compare
CA265_RS18125 +0.9 5.5 gliding motility protein GldL compare
CA265_RS15115 +0.9 5.2 porin compare
CA265_RS15085 +0.9 5.5 hypothetical protein compare
CA265_RS23640 +0.9 6.5 hypothetical protein compare
CA265_RS13225 +0.9 7.0 exonuclease compare
CA265_RS03260 +0.9 5.7 multidrug ABC transporter ATP-binding protein compare
CA265_RS23635 +0.9 6.9 gliding motility lipoprotein GldJ compare
CA265_RS15200 +0.9 2.4 hypothetical protein compare
CA265_RS18485 +0.9 4.7 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
CA265_RS18190 +0.8 5.7 cupin compare
CA265_RS07755 +0.8 2.3 hypothetical protein compare
CA265_RS18115 +0.8 5.7 gliding motility protein GldN compare
CA265_RS17555 +0.8 6.5 hypothetical protein compare
CA265_RS18985 +0.8 3.3 hypothetical protein compare
CA265_RS13255 +0.8 4.8 leucine dehydrogenase compare
CA265_RS12665 +0.8 1.5 cold-shock protein compare
CA265_RS09000 +0.7 1.9 hypothetical protein compare
CA265_RS01200 +0.7 3.2 hypothetical protein compare
CA265_RS20395 +0.7 1.4 hypothetical protein compare
CA265_RS21715 +0.7 4.6 hypothetical protein compare
CA265_RS18130 +0.7 5.5 gliding motility-associated lipoprotein compare
CA265_RS19535 +0.7 5.3 hypothetical protein compare
CA265_RS18550 +0.7 1.2 N-acetyltransferase compare
CA265_RS10600 +0.7 3.3 RNA polymerase subunit sigma-24 compare
CA265_RS03295 +0.7 5.6 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA265_RS03290 +0.7 3.8 gliding motility-associated ABC transporter permease subunit GldF compare
CA265_RS23905 +0.7 4.7 hypothetical protein compare
CA265_RS23520 +0.7 5.5 phosphate ABC transporter substrate-binding protein compare
CA265_RS18225 +0.7 4.6 DNA-binding response regulator compare
CA265_RS17560 +0.7 4.1 peptidylprolyl isomerase compare
CA265_RS23545 +0.7 1.1 NADH dehydrogenase subunit D compare
CA265_RS23525 +0.7 4.7 hypothetical protein compare
CA265_RS23150 +0.6 4.1 DNA-binding response regulator compare
CA265_RS19140 +0.6 1.6 tRNA-Ile compare
CA265_RS16990 +0.6 2.2 hypothetical protein compare
CA265_RS04445 +0.6 1.7 hypothetical protein compare
CA265_RS25375 +0.6 2.8 hypothetical protein compare
CA265_RS19575 +0.6 1.8 glycoside hydrolase compare
CA265_RS21365 +0.6 1.7 thiol reductase thioredoxin compare
CA265_RS21285 +0.6 3.8 DNA-binding response regulator compare
CA265_RS08320 +0.6 3.3 DNA mismatch repair protein MutT compare
CA265_RS22905 +0.6 2.4 GTPase HflX compare
CA265_RS04940 +0.6 2.8 RecX family transcriptional regulator compare
CA265_RS23100 +0.6 2.5 hypothetical protein compare
CA265_RS04560 +0.6 1.5 hypothetical protein compare
CA265_RS20380 +0.6 3.9 hemagglutinin compare
CA265_RS14910 +0.6 3.8 ABC transporter ATP-binding protein compare
CA265_RS18090 +0.6 4.9 gliding motility protein compare
CA265_RS04275 +0.6 3.8 ATP-dependent protease ATP-binding subunit ClpX compare
CA265_RS21290 +0.6 3.1 hypothetical protein compare
CA265_RS21255 +0.6 4.1 hypothetical protein compare
CA265_RS04315 +0.6 3.5 hypothetical protein compare
CA265_RS16615 +0.6 1.4 hypothetical protein compare
CA265_RS12280 +0.6 2.2 hypothetical protein compare
CA265_RS08085 +0.6 3.5 aminodeoxychorismate lyase compare
CA265_RS20270 +0.6 1.0 methionine--tRNA ligase compare
CA265_RS23985 +0.5 3.3 gliding motility lipoprotein GldB compare
CA265_RS10495 +0.5 0.9 hypothetical protein compare
CA265_RS17145 +0.5 1.9 malate:quinone oxidoreductase compare
CA265_RS23755 +0.5 2.9 lauroyl acyltransferase compare
CA265_RS25355 +0.5 3.5 DUF2807 domain-containing protein compare
CA265_RS02745 +0.5 2.2 hypothetical protein compare
CA265_RS06315 +0.5 2.9 uridine kinase compare
CA265_RS21395 +0.5 1.5 hypothetical protein compare
CA265_RS06585 +0.5 3.2 hypothetical protein compare
CA265_RS01195 +0.5 1.9 hypothetical protein compare
CA265_RS21260 +0.5 3.4 hypothetical protein compare
CA265_RS19405 +0.5 2.0 transcriptional regulator compare
CA265_RS21915 +0.5 3.5 LacI family transcriptional regulator compare
CA265_RS06405 +0.5 1.5 hypothetical protein compare
CA265_RS08570 +0.5 1.6 dehydratase compare
CA265_RS20645 +0.5 2.2 RNA polymerase subunit sigma-70 compare
CA265_RS24625 +0.5 3.0 LacI family transcriptional regulator compare
CA265_RS20095 +0.5 1.9 NADH oxidase compare
CA265_RS11975 +0.5 1.9 hypothetical protein compare
CA265_RS16155 +0.5 2.5 tRNA pseudouridine(55) synthase TruB compare
CA265_RS16385 +0.5 3.4 transporter compare
CA265_RS18305 +0.5 1.8 Clp protease ClpS compare
CA265_RS10660 +0.5 1.6 acyl dehydratase compare
CA265_RS08775 +0.5 0.7 hypothetical protein compare
CA265_RS19500 +0.5 2.5 methyltransferase type 11 compare
CA265_RS05930 +0.5 3.2 glycosyl hydrolase compare
CA265_RS08995 +0.5 3.5 TonB-dependent receptor compare
CA265_RS19705 +0.5 1.8 tRNA-binding protein compare
CA265_RS20750 +0.4 1.3 hypothetical protein compare
CA265_RS03270 +0.4 2.7 hypothetical protein compare
CA265_RS18085 +0.4 1.9 hypothetical protein compare
CA265_RS08890 +0.4 3.0 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
CA265_RS17570 +0.4 2.0 peptidylprolyl isomerase compare
CA265_RS15530 +0.4 2.5 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA265_RS17295 +0.4 2.5 hypothetical protein compare
CA265_RS25255 +0.4 2.6 methyltransferase type 11 compare
CA265_RS19940 +0.4 3.4 hypothetical protein compare
CA265_RS09040 +0.4 2.9 ribonuclease Z compare
CA265_RS05100 +0.4 2.4 threonylcarbamoyl-AMP synthase compare
CA265_RS18780 +0.4 1.2 YicC family protein compare
CA265_RS03160 +0.4 2.6 hydrolase compare
CA265_RS02740 +0.4 2.9 radical SAM protein compare
CA265_RS12600 +0.4 1.3 hypothetical protein compare
CA265_RS03280 +0.4 1.4 hypothetical protein compare
CA265_RS09900 +0.4 3.3 TetR family transcriptional regulator compare
CA265_RS04020 +0.4 3.0 hypothetical protein compare
CA265_RS09120 +0.4 2.7 hypothetical protein compare
CA265_RS12340 +0.4 1.9 hypothetical protein compare
CA265_RS12850 +0.4 1.9 3-oxoacyl-ACP synthase compare
CA265_RS21280 +0.4 3.5 hypothetical protein compare
CA265_RS06320 +0.4 2.5 hypothetical protein compare
CA265_RS22075 +0.4 2.0 hypothetical protein compare
CA265_RS17090 +0.4 1.1 DUF2132 domain-containing protein compare
CA265_RS02110 +0.4 1.5 hypothetical protein compare
CA265_RS03275 +0.4 0.8 hypothetical protein compare
CA265_RS20965 +0.4 2.0 5'(3')-deoxyribonucleotidase compare
CA265_RS02930 +0.4 1.9 beta-glucanase compare
CA265_RS18465 +0.4 2.3 RNA-splicing ligase RtcB compare
CA265_RS09150 +0.4 2.5 hypothetical protein compare
CA265_RS25435 +0.4 1.3 hypothetical protein compare
CA265_RS05720 +0.4 2.0 hypothetical protein compare
CA265_RS19345 +0.4 3.0 hypothetical protein compare
CA265_RS19050 +0.4 1.1 acylphosphatase compare
CA265_RS04100 +0.4 1.4 uroporphyrinogen-III C-methyltransferase compare
CA265_RS05185 +0.4 2.9 hypothetical protein compare
CA265_RS17760 +0.4 2.9 hypothetical protein compare
CA265_RS11170 +0.4 2.7 hypothetical protein compare
CA265_RS24025 +0.4 2.2 hypothetical protein compare
CA265_RS23135 +0.4 2.6 ABC transporter ATP-binding protein compare
CA265_RS23705 +0.4 1.6 esterase compare
CA265_RS16380 +0.4 2.7 efflux transporter periplasmic adaptor subunit compare
CA265_RS21905 +0.4 1.9 hypothetical protein compare
CA265_RS24965 +0.4 1.8 hypothetical protein compare
CA265_RS07140 +0.4 2.8 MFS transporter compare
CA265_RS17460 +0.4 2.1 RNA polymerase sigma-70 factor compare
CA265_RS16295 +0.4 2.4 LacI family transcriptional regulator compare
CA265_RS08315 +0.4 0.6 tRNA-Lys compare
CA265_RS01645 +0.4 2.8 hypothetical protein compare
CA265_RS19590 +0.4 0.6 hypothetical protein compare
CA265_RS22635 +0.4 0.7 phosphoserine phosphatase (EC 3.1.3.3) (from data) compare
CA265_RS04040 +0.4 1.4 hypothetical protein compare
CA265_RS21225 +0.4 2.6 hypothetical protein compare
CA265_RS06425 +0.4 1.7 hypothetical protein compare
CA265_RS19465 +0.4 1.5 protein tyrosine phosphatase compare
CA265_RS25395 +0.4 1.3 cysteine hydrolase compare
CA265_RS09010 +0.4 1.5 3-phosphoglycerate dehydrogenase compare
CA265_RS20525 +0.4 0.9 hypothetical protein compare
CA265_RS04360 +0.4 2.8 hypothetical protein compare
CA265_RS09705 +0.4 1.4 copper oxidase compare
CA265_RS18245 +0.4 1.6 hypothetical protein compare
CA265_RS02655 +0.4 1.7 hypothetical protein compare
CA265_RS17765 +0.4 3.2 SusC/RagA family protein compare
CA265_RS18145 +0.4 2.0 hypothetical protein compare
CA265_RS24055 +0.4 1.4 GNAT family N-acetyltransferase compare
CA265_RS02750 +0.4 1.2 hypothetical protein compare
CA265_RS22165 +0.4 0.7 hypothetical protein compare
CA265_RS13925 +0.4 2.1 alpha/beta hydrolase compare
CA265_RS03435 +0.4 1.0 hypothetical protein compare
CA265_RS17750 +0.4 2.8 hypothetical protein compare
CA265_RS22045 +0.4 2.3 hypothetical protein compare
CA265_RS05935 +0.4 2.7 aminoglycoside phosphotransferase compare
CA265_RS20310 +0.4 3.1 SusC/RagA family TonB-linked outer membrane protein compare
CA265_RS16995 +0.4 1.7 hypothetical protein compare
CA265_RS03910 +0.4 1.9 hypothetical protein compare
CA265_RS19565 +0.4 1.7 hypothetical protein compare
CA265_RS20565 +0.4 2.1 metallophosphoesterase compare
CA265_RS08920 +0.4 2.1 hypothetical protein compare
CA265_RS19785 +0.4 1.5 hypothetical protein compare
CA265_RS23180 +0.4 0.8 peroxiredoxin compare
CA265_RS25400 +0.4 2.1 fatty acid desaturase compare
CA265_RS18200 +0.4 1.0 DUF4440 domain-containing protein compare
CA265_RS14170 +0.4 1.4 DNA repair protein compare
CA265_RS06030 +0.4 0.7 SelT/selW/selH selenoprotein compare
CA265_RS21265 +0.4 2.5 hypothetical protein compare
CA265_RS09220 +0.4 2.2 PKD domain-containing protein compare
CA265_RS08050 +0.3 2.4 hypothetical protein compare
CA265_RS19150 +0.3 2.1 amidophosphoribosyltransferase compare
CA265_RS10040 +0.3 1.0 hypothetical protein compare
CA265_RS16480 +0.3 2.4 hypothetical protein compare
CA265_RS06010 +0.3 1.5 hypothetical protein compare
CA265_RS23700 +0.3 2.1 hypothetical protein compare
CA265_RS12780 +0.3 1.1 hypothetical protein compare
CA265_RS24920 +0.3 1.0 hypothetical protein compare
CA265_RS18565 +0.3 1.8 hypothetical protein compare
CA265_RS15260 +0.3 2.2 hypothetical protein compare
CA265_RS02170 +0.3 1.0 hypothetical protein compare
CA265_RS21240 +0.3 2.3 hypothetical protein compare
CA265_RS05430 +0.3 1.5 nucleoside-diphosphate sugar epimerase compare
CA265_RS16785 +0.3 0.6 50S ribosomal protein L17 compare
CA265_RS15640 +0.3 2.4 sugar kinase compare


Specific Phenotypes

For 8 genes in this experiment

For stress MreB Perturbing Compound A22 in Pedobacter sp. GW460-11-11-14-LB5

For stress MreB Perturbing Compound A22 across organisms