Experiment set2H47 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with nitrate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2077 +2.6 10.8 cAMP-binding protein compare
Dsui_2076 +1.8 5.0 cytochrome c, mono- and diheme variants family compare
Dsui_0394 +1.6 8.8 sugar kinase, ribokinase compare
Dsui_0042 +1.5 3.2 Protein of unknown function (DUF2892) compare
Dsui_3375 +1.1 1.4 hypothetical protein compare
Dsui_0859 +1.0 1.8 hypothetical protein compare
Dsui_2927 +1.0 2.1 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_2607 +0.9 1.6 hypothetical protein compare
Dsui_3384 +0.9 7.0 transporter, monovalent cation:proton antiporter-2 (CPA2) family compare
Dsui_3023 +0.9 6.4 phosphate/sulfate permease compare
Dsui_0106 +0.9 2.8 hypothetical protein compare
Dsui_1590 +0.8 2.5 hypothetical protein compare
Dsui_3130 +0.8 1.2 tRNA-Leu compare
Dsui_2873 +0.8 1.3 Peroxiredoxin compare
Dsui_2090 +0.8 1.8 transcriptional regulator compare
Dsui_2392 +0.8 2.2 2''-5'' RNA ligase compare
Dsui_1187 +0.8 6.8 type IV pilus assembly protein PilM compare
Dsui_1855 +0.8 1.7 hypothetical protein compare
Dsui_0945 +0.8 2.4 Iron-sulfur cluster assembly accessory protein compare
Dsui_2186 +0.8 4.0 Protein of unknown function (DUF3567) compare
Dsui_0417 +0.8 2.1 gamma-glutamyltransferase compare
Dsui_1873 +0.8 3.5 transcriptional regulator compare
Dsui_3495 +0.8 1.3 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_1588 +0.7 4.9 aminoglycoside phosphotransferase compare
Dsui_2369 +0.7 3.1 iron-sulfur cluster assembly transcription factor IscR compare
Dsui_1996 +0.7 5.4 PhoH family protein compare
Dsui_2748 +0.7 2.3 hypothetical protein compare
Dsui_2378 +0.7 1.3 hypothetical protein compare
Dsui_1664 +0.7 2.6 putative periplasmic protein compare
Dsui_3024 +0.7 3.3 phosphate transport regulator related to PhoU compare
Dsui_1997 +0.7 2.9 Peroxiredoxin compare
Dsui_1012 +0.7 3.6 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2265 +0.7 1.3 DNA-directed DNA polymerase III PolC compare
Dsui_0631 +0.7 2.0 cytochrome c551/c552 compare
Dsui_2315 +0.6 2.5 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_3411 +0.6 2.4 hypothetical protein compare
Dsui_2536 +0.6 3.4 hypothetical protein compare
Dsui_2959 +0.6 2.7 precorrin-4 C11-methyltransferase compare
Dsui_1615 +0.6 2.6 hypothetical protein compare
Dsui_0382 +0.6 2.5 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1955 +0.6 2.4 3'-5' exonuclease compare
Dsui_2188 +0.6 3.5 Protein of unknown function (DUF3460) compare
Dsui_0045 +0.6 2.3 glutaredoxin-like protein compare
Dsui_1488 +0.6 2.9 putative metal-dependent hydrolase compare
Dsui_3416 +0.6 0.6 transcriptional regulator compare
Dsui_2883 +0.6 1.5 biotin biosynthesis protein BioC compare
Dsui_2268 +0.6 1.2 putative lactoylglutathione lyase compare
Dsui_1529 +0.6 1.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2538 +0.6 3.4 acetoacetyl-CoA reductase compare
Dsui_0571 +0.5 1.9 ferredoxin compare
Dsui_2977 +0.5 1.8 RNA polymerase sigma factor, sigma-70 family compare
Dsui_2407 +0.5 1.6 beta-propeller domain-containing protein, methanol dehydrogenase compare
Dsui_0203 +0.5 1.5 hypothetical protein compare
Dsui_2187 +0.5 1.5 acyl-CoA synthetase/AMP-acid ligase compare
Dsui_1482 +0.5 1.6 hypothetical protein compare
Dsui_0692 +0.5 2.2 hypothetical protein compare
Dsui_0433 +0.5 2.1 collagenase-like protease compare
Dsui_1607 +0.5 1.2 putative membrane-associated protein compare
Dsui_0548 +0.5 1.7 putative transporter component compare
Dsui_2659 +0.5 2.9 cold shock protein compare
Dsui_3154 +0.5 2.7 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_0515 +0.5 1.4 hypothetical protein compare
Dsui_0408 +0.5 3.8 cation/multidrug efflux pump compare
Dsui_1613 +0.5 3.3 cytochrome c553 compare
Dsui_0591 +0.5 2.3 deoxyribodipyrimidine photolyase compare
Dsui_2050 +0.5 1.8 hypothetical protein compare
Dsui_1669 +0.5 1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0696 +0.5 2.3 family 3 adenylate cyclase compare
Dsui_0179 +0.5 1.5 hypothetical protein compare
Dsui_3144 +0.5 2.0 type IV pilus biogenesis/stability protein PilW compare
Dsui_2911 +0.5 1.3 cation/cationic drug transporter compare
Dsui_2756 +0.5 0.8 hypothetical protein compare
Dsui_3518 +0.5 2.4 putative membrane protein compare
Dsui_1661 +0.5 1.5 hypothetical protein compare
Dsui_0994 +0.5 1.9 peptidase S16, lon domain protein compare
Dsui_0667 +0.5 1.2 hypothetical protein compare
Dsui_0700 +0.5 1.6 psiF repeat protein compare
Dsui_1357 +0.5 1.3 hypothetical protein compare
Dsui_2966 +0.5 1.3 cobalamin biosynthesis protein CbiG compare
Dsui_1096 +0.5 3.2 glutamate synthase family protein compare
Dsui_0301 +0.5 1.8 histidine kinase compare
Dsui_2476 +0.5 0.9 hypothetical protein compare
Dsui_0752 +0.5 2.1 hypothetical protein compare
Dsui_0949 +0.5 0.9 hypothetical protein compare
Dsui_1649 +0.5 1.0 universal stress protein UspA-like protein compare
Dsui_2199 +0.5 0.8 bacterial nucleoid DNA-binding protein compare
Dsui_0593 +0.5 1.5 putative transcriptional regulator compare
Dsui_0494 +0.5 2.2 ribonuclease PH compare
Dsui_3242 +0.5 2.4 hypothetical protein compare
Dsui_1386 +0.5 3.1 family 3 adenylate cyclase compare
Dsui_1572 +0.5 2.7 hypothetical protein compare
Dsui_1367 +0.5 2.4 crcB protein compare
Dsui_1646 +0.5 1.5 cAMP-binding protein compare
Dsui_3402 +0.4 1.4 putative amidohydrolase compare
Dsui_3205 +0.4 2.3 pseudouridine synthase, RluA family compare
Dsui_2809 +0.4 0.9 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_1010 +0.4 1.3 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2539 +0.4 1.2 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_0753 +0.4 2.1 ATPase component of ABC transporters with duplicated ATPase domain compare
Dsui_1556 +0.4 2.7 RND family efflux transporter, MFP subunit compare
Dsui_1188 +0.4 4.3 Tfp pilus assembly protein PilN compare
Dsui_0874 +0.4 2.8 hypothetical protein compare
Dsui_2943 +0.4 2.4 ABC-type spermidine/putrescine transport system, ATPase component compare
Dsui_3268 +0.4 1.1 exodeoxyribonuclease VII, large subunit compare
Dsui_1297 +0.4 1.1 biotin synthetase compare
Dsui_1251 +0.4 1.0 acylphosphatase compare
Dsui_3335 +0.4 2.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_3291 +0.4 0.9 hypothetical protein compare
Dsui_1750 +0.4 2.3 flagellar basal body-associated protein compare
Dsui_0784 +0.4 3.0 hypothetical protein compare
Dsui_2005 +0.4 1.7 DNA polymerase III epsilon subunit-like 3'-5' exonuclease compare
Dsui_2880 +0.4 2.2 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_0131 +0.4 3.2 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_3171 +0.4 0.7 putative protein-disulfide isomerase compare
Dsui_2160 +0.4 2.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0598 +0.4 1.2 hypothetical protein compare
Dsui_1610 +0.4 1.9 Protein of unknown function (DUF3079) compare
Dsui_0652 +0.4 2.0 putative membrane protein compare
Dsui_1844 +0.4 1.4 phosphate transport regulator related to PhoU compare
Dsui_2341 +0.4 1.5 ABC-type multidrug transport system, ATPase component compare
Dsui_0454 +0.4 0.5 hypothetical protein compare
Dsui_1663 +0.4 1.9 ABC-type Co2+ transport system, periplasmic component compare
Dsui_3160 +0.4 1.8 response regulator compare
Dsui_3449 +0.4 2.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0257 +0.4 1.8 hypothetical protein compare
Dsui_0619 +0.4 2.3 TonB-dependent siderophore receptor compare
Dsui_2344 +0.4 3.5 hypothetical protein compare
Dsui_0699 +0.4 2.1 hypothetical protein compare
Dsui_2658 +0.4 2.1 hypothetical protein compare
Dsui_0734 +0.4 1.1 acetyltransferase compare
Dsui_1189 +0.4 3.8 Tfp pilus assembly protein PilO compare
Dsui_0621 +0.4 0.6 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0689 +0.4 1.6 lysophospholipase compare
Dsui_1256 +0.4 1.9 hypothetical protein compare
Dsui_1713 +0.4 1.4 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain compare
Dsui_0517 +0.4 2.3 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data) compare
Dsui_2251 +0.4 1.4 signal transduction histidine kinase compare
Dsui_3036 +0.4 3.0 Zn-finger containing NTP pyrophosphohydrolase compare
Dsui_3085 +0.4 2.0 tetratricopeptide repeat protein compare
Dsui_2796 +0.4 2.6 NAD-dependent protein deacetylase, SIR2 family compare
Dsui_2436 +0.4 1.7 ribonuclease, Rne/Rng family compare
Dsui_2876 +0.4 1.7 RND family efflux transporter, MFP subunit compare
Dsui_0576 +0.4 1.3 electron transfer flavoprotein, beta subunit compare
Dsui_0056 +0.4 1.9 glycosyl transferase compare
Dsui_1197 +0.4 1.4 putative Mg2+ and Co2+ transporter CorC compare
Dsui_3367 +0.4 1.8 ABC-type sugar transport system, periplasmic component compare
Dsui_0061 +0.4 3.4 glycosyltransferase compare
Dsui_3106 +0.4 1.5 hypothetical protein compare
Dsui_1845 +0.4 1.2 phosphate/sulfate permease compare
Dsui_1631 +0.4 2.5 cytochrome c oxidase accessory protein FixG compare
Dsui_0755 +0.4 1.8 hypothetical protein compare
Dsui_0288 +0.4 2.3 hypothetical protein compare
Dsui_2210 +0.4 2.0 transcriptional regulator compare
Dsui_0654 +0.4 2.1 hypothetical protein compare
Dsui_0016 +0.4 2.2 transcriptional regulator compare
Dsui_0295 +0.4 1.2 hypothetical protein compare
Dsui_3153 +0.4 2.0 TRAP transporter, DctM subunit compare
Dsui_1701 +0.3 1.7 restriction endonuclease compare
Dsui_0079 +0.3 3.0 pseudaminic acid synthase compare
Dsui_0635 +0.3 2.3 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_0641 +0.3 1.5 putative rRNA methylase compare
Dsui_1839 +0.3 0.7 hypothetical protein compare
Dsui_0078 +0.3 3.2 putative dehydrogenase compare
Dsui_1714 +0.3 2.0 anti-anti-sigma factor compare
Dsui_2940 +0.3 3.1 hypothetical protein compare
Dsui_1524 +0.3 1.9 transcriptional regulator compare
Dsui_0127 +0.3 1.8 transcriptional regulator compare
Dsui_0895 +0.3 1.0 nitrogen regulatory protein PII compare
Dsui_0780 +0.3 2.2 acetoacetyl-CoA reductase compare
Dsui_2832 +0.3 2.6 hypothetical protein compare
Dsui_1295 +0.3 2.7 lipid A core-O-antigen ligase-like enyme compare
Dsui_0638 +0.3 2.5 ABC-type polar amino acid transport system, ATPase component compare
Dsui_3247 +0.3 1.7 Protein of unknown function (DUF2788) compare
Dsui_1521 +0.3 1.0 hypothetical protein compare
Dsui_2139 +0.3 1.5 Protein of unknown function (DUF3348) compare
Dsui_0286 +0.3 2.6 Protein of unknown function (DUF3423) compare
Dsui_2867 +0.3 0.6 surface antigen family protein compare
Dsui_1455 +0.3 2.2 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0506 +0.3 2.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3228 +0.3 1.3 transcriptional regulator compare
Dsui_2695 +0.3 2.1 methionine aminopeptidase, type I compare
Dsui_2829 +0.3 2.8 hypothetical protein compare
Dsui_1551 +0.3 1.4 DNA mismatch repair protein MutL compare
Dsui_2336 +0.3 1.5 hypothetical protein compare
Dsui_0582 +0.3 1.4 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Dsui_3426 +0.3 0.9 transcriptional regulator compare
Dsui_0084 +0.3 3.0 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain compare
Dsui_2566 +0.3 3.1 hypothetical protein compare
Dsui_2345 +0.3 3.2 hypothetical protein compare
Dsui_1899 +0.3 1.7 rRNA methylase, putative, group 3 compare
Dsui_2875 +0.3 1.5 outer membrane protein compare
Dsui_2331 +0.3 0.7 heat shock protein compare
Dsui_1725 +0.3 2.0 ATPase involved in chromosome partitioning compare
Dsui_1233 +0.3 2.2 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_0293 +0.3 1.2 PilZ domain-containing protein compare
Dsui_2970 +0.3 0.7 putative Fe-S oxidoreductase compare
Dsui_3351 +0.3 0.6 cytochrome c peroxidase compare
Dsui_0946 +0.3 0.8 putative nitrogen fixation protein FixT compare
Dsui_3381 +0.3 1.4 hypothetical protein compare
Dsui_1000 +0.3 0.7 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For anaerobic Sodium nitrate in Dechlorosoma suillum PS

For anaerobic Sodium nitrate across organisms