Experiment set2H46 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1647 -6.0 -8.2 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_3034 -4.9 -19.7 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_1460 -4.5 -9.0 cAMP-binding protein compare
Dsui_2152 -4.4 -3.1 molybdenum cofactor synthesis domain protein compare
Dsui_1176 -4.4 -11.3 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_1177 -4.4 -8.8 Ethylbenzene dehydrogenase compare
Dsui_3080 -4.1 -2.1 molecular chaperone GrpE (heat shock protein) compare
Dsui_3054 -4.1 -2.8 phosphate ABC transporter, permease protein PstA compare
Dsui_2153 -4.1 -7.5 molybdopterin converting factor, subunit 1 compare
Dsui_3139 -3.8 -3.7 outer membrane assembly lipoprotein YfgL compare
Dsui_2696 -3.6 -10.4 (protein-PII) uridylyltransferase compare
Dsui_3392 -3.6 -6.4 carboxylate-amine ligase, YbdK family compare
Dsui_3110 -3.6 -6.4 nitric oxide reductase large subunit compare
Dsui_0465 -3.6 -3.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_1578 -3.5 -3.4 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0509 -3.5 -7.1 MauM/NapG family ferredoxin-type protein compare
Dsui_1827 -3.5 -2.4 hypothetical protein compare
Dsui_2935 -3.4 -3.3 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1398 -3.4 -6.5 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1970 -3.3 -3.9 metalloendopeptidase-like membrane protein compare
Dsui_0508 -3.3 -13.2 periplasmic nitrate reductase, large subunit compare
Dsui_1170 -3.3 -1.7 heme exporter protein CcmD compare
Dsui_3102 -3.2 -3.1 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0469 -3.2 -2.2 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_0675 -3.2 -3.0 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_1321 -3.1 -7.4 ABC-type uncharacterized transport system, permease component compare
Dsui_1978 -3.1 -2.1 putative lipoprotein compare
Dsui_3081 -3.0 -2.0 chaperone protein DnaK compare
Dsui_3117 -3.0 -3.5 hypothetical protein compare
Dsui_3220 -3.0 -2.0 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_2154 -2.9 -5.4 molybdopterin converting factor, large subunit compare
Dsui_0507 -2.8 -4.3 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_3109 -2.8 -5.6 cytochrome c, mono- and diheme variants family compare
Dsui_0004 -2.8 -6.1 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_2151 -2.7 -3.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_0745 -2.6 -1.8 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_1969 -2.6 -7.5 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_3120 -2.6 -3.9 cAMP-binding protein compare
Dsui_1235 -2.6 -3.0 hypothetical protein compare
Dsui_1928 -2.6 -4.2 cytochrome c, mono- and diheme variants family compare
Dsui_1236 -2.6 -7.6 molybdenum cofactor synthesis domain protein compare
Dsui_0962 -2.5 -9.4 collagenase-like protease compare
Dsui_3299 -2.5 -8.9 Peroxiredoxin compare
Dsui_3318 -2.5 -9.8 cytochrome c, mono- and diheme variants family compare
Dsui_1932 -2.4 -4.6 transcriptional regulator compare
Dsui_1399 -2.4 -4.2 conserved hypothetical integral membrane protein compare
Dsui_0963 -2.4 -5.4 collagenase-like protease compare
Dsui_2745 -2.3 -2.7 methyl-accepting chemotaxis protein compare
Dsui_1400 -2.3 -6.7 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_1930 -2.3 -6.3 transcriptional regulator compare
Dsui_3240 -2.3 -4.7 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3393 -2.3 -4.3 Kef-type K+ transport system, membrane component compare
Dsui_1642 -2.3 -6.2 hypothetical protein compare
Dsui_2355 -2.3 -2.6 cytochrome B561 compare
Dsui_2868 -2.3 -3.0 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein compare
Dsui_0510 -2.3 -3.7 ferredoxin-type protein, NapH/MauN family compare
Dsui_0687 -2.2 -3.0 Protein of unknown function (DUF2905) compare
Dsui_1325 -2.2 -4.2 ADP-ribose pyrophosphatase compare
Dsui_1403 -2.2 -2.5 putative NTP binding protein (contains STAS domain) compare
Dsui_0099 -2.2 -3.0 putative periplasmic or secreted lipoprotein compare
Dsui_0399 -2.2 -4.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_1929 -2.2 -5.8 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_1640 -2.2 -3.5 hypothetical protein compare
Dsui_0747 -2.1 -3.5 glutamate--cysteine ligase compare
Dsui_1391 -2.1 -2.8 hypothetical protein compare
Dsui_3305 -2.1 -10.3 parallel beta-helix repeat (two copies) compare
Dsui_2466 -2.1 -1.9 ATP dependent DNA ligase-like protein compare
Dsui_1084 -2.1 -9.4 bacteriophage protein gp37 compare
Dsui_0685 -2.1 -2.4 glutathione S-transferase compare
Dsui_2295 -2.0 -2.0 transcriptional regulator compare
Dsui_1577 -2.0 -1.9 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1947 -2.0 -1.3 nucleotide sugar dehydrogenase compare
Dsui_3300 -2.0 -10.2 ABC-2 type transporter compare
Dsui_0964 -2.0 -2.3 putative lipid carrier protein compare
Dsui_0608 -2.0 -5.0 nucleoside-diphosphate-sugar epimerase compare
Dsui_2368 -1.9 -3.8 serine O-acetyltransferase compare
Dsui_3302 -1.9 -6.6 ABC-type multidrug transport system, ATPase component compare
Dsui_0434 -1.9 -3.1 ribonuclease, Rne/Rng family compare
Dsui_2752 -1.9 -1.8 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_2086 -1.9 -2.5 cytochrome c compare
Dsui_0401 -1.9 -2.1 nucleoside-diphosphate-sugar epimerase compare
Dsui_0460 -1.9 -2.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_3301 -1.9 -9.2 NosL compare
Dsui_3319 -1.8 -3.0 uroporphyrin-III C-methyltransferase compare
Dsui_3523 -1.8 -3.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3306 -1.8 -8.2 hypothetical protein compare
Dsui_0003 -1.8 -3.7 putative Zn-dependent protease compare
Dsui_2454 -1.8 -4.6 Positive regulator of sigma E activity compare
Dsui_0992 -1.8 -2.1 putative membrane protein compare
Dsui_1931 -1.8 -4.2 transcriptional regulator compare
Dsui_3126 -1.8 -4.2 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3532 -1.8 -4.2 Protein of unknown function (DUF3106) compare
Dsui_1221 -1.8 -4.2 hypothetical protein compare
Dsui_3323 -1.7 -3.5 tRNA-guanine transglycosylase, queuosine-34-forming compare
Dsui_0116 -1.7 -2.0 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_0562 -1.7 -6.3 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Dsui_2158 -1.7 -2.2 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2126 -1.7 -1.7 alanine dehydrogenase compare
Dsui_1401 -1.7 -4.7 surface lipoprotein compare
Dsui_2196 -1.7 -2.7 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_2251 -1.7 -3.5 signal transduction histidine kinase compare
Dsui_2902 -1.7 -1.4 hypothetical protein compare
Dsui_0650 -1.7 -3.1 hypothetical protein compare
Dsui_1402 -1.6 -2.3 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1968 -1.6 -6.5 5''/3''-nucleotidase SurE compare
Dsui_2189 -1.6 -2.7 acyl-CoA synthetase (NDP forming) compare
Dsui_2678 -1.6 -7.6 hypothetical protein compare
Dsui_2887 -1.6 -3.0 hypothetical protein compare
Dsui_0564 -1.6 -5.5 molybdenum ABC transporter, ATP-binding protein compare
Dsui_3484 -1.6 -1.5 putative permease compare
Dsui_3443 -1.6 -3.1 RND family efflux transporter, MFP subunit compare
Dsui_3027 -1.6 -3.8 coenzyme F420-reducing hydrogenase, alpha subunit compare
Dsui_0278 -1.6 -3.7 K+-transporting ATPase, B subunit compare
Dsui_2816 -1.5 -3.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1251 -1.5 -2.1 acylphosphatase compare
Dsui_1271 -1.5 -7.4 membrane-bound metallopeptidase compare
Dsui_2694 -1.5 -2.2 ribosomal protein S2 compare
Dsui_2043 -1.5 -2.7 cysteine synthase compare
Dsui_0252 -1.5 -1.8 TIGR00252 family protein compare
Dsui_1605 -1.5 -3.0 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2224 -1.5 -2.5 hypothetical protein compare
Dsui_3133 -1.5 -1.3 hypothetical protein compare
Dsui_2818 -1.5 -3.2 hypothetical protein compare
Dsui_2666 -1.5 -2.9 putative transcriptional regulator compare
Dsui_0520 -1.5 -8.7 transcriptional regulator compare
Dsui_3096 -1.5 -3.7 NADH dehydrogenase, FAD-containing subunit compare
Dsui_3304 -1.5 -7.4 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_0563 -1.5 -6.2 molybdate ABC transporter, permease protein compare
Dsui_1944 -1.5 -5.9 integration host factor, beta subunit compare
Dsui_0029 -1.4 -3.3 putative pyrophosphatase compare
Dsui_1061 -1.4 -6.7 membrane-bound lytic murein transglycosylase compare
Dsui_2702 -1.4 -2.5 cell division protein compare
Dsui_0477 -1.4 -2.5 tol-pal system protein YbgF compare
Dsui_2717 -1.4 -2.9 RNA polymerase-binding protein DksA compare
Dsui_3520 -1.4 -8.7 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3303 -1.4 -7.7 ferredoxin-type protein, NapH/MauN family compare
Dsui_2358 -1.4 -2.5 signal transduction histidine kinase compare
Dsui_2673 -1.4 -2.7 hypothetical protein compare
Dsui_1893 -1.4 -2.2 putative membrane protein compare
Dsui_1855 -1.4 -1.8 hypothetical protein compare
Dsui_0624 -1.4 -2.2 hypothetical protein compare
Dsui_1275 -1.4 -2.2 protein-export chaperone SecB compare
Dsui_1759 -1.4 -3.2 flagellar hook-basal body complex protein FliE compare
Dsui_1641 -1.3 -3.5 SirA-like protein compare
Dsui_3414 -1.3 -5.2 FAD/FMN-dependent dehydrogenase compare
Dsui_3207 -1.3 -1.5 ankyrin repeat-containing protein compare
Dsui_3307 -1.3 -6.1 cytochrome c553 compare
Dsui_1427 -1.3 -2.1 dinuclear metal center protein, YbgI/SA1388 family compare
Dsui_2259 -1.3 -1.2 hypothetical protein compare
Dsui_1198 -1.3 -4.4 apolipoprotein N-acyltransferase compare
Dsui_1528 -1.3 -5.2 signal transduction histidine kinase compare
Dsui_2249 -1.3 -2.9 signal transduction histidine kinase compare
Dsui_2427 -1.3 -5.1 molybdenum cofactor biosynthesis protein A compare
Dsui_2981 -1.3 -0.8 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_0007 -1.3 -1.5 cold shock protein compare
Dsui_1576 -1.3 -1.2 dihydrolipoamide dehydrogenase compare
Dsui_1541 -1.3 -2.9 cytochrome c553 compare
Dsui_0306 -1.3 -1.6 putative permease compare
Dsui_2402 -1.3 -1.1 hypothetical protein compare
Dsui_2687 -1.3 -5.0 RIP metalloprotease RseP compare
Dsui_0704 -1.3 -6.3 RNA polymerase sigma-54 factor compare
Dsui_3149 -1.3 -2.2 electron transfer flavoprotein, alpha subunit compare
Dsui_0193 -1.2 -4.2 putative phage protein, putative large terminase compare
Dsui_3327 -1.2 -1.7 cytochrome b compare
Dsui_0552 -1.2 -2.0 nitrogen fixation protein NifX compare
Dsui_1004 -1.2 -0.8 conserved protein of DIM6/NTAB family compare
Dsui_3258 -1.2 -2.8 mannose-6-phosphate isomerase compare
Dsui_3320 -1.2 -3.4 1,4-dihydroxy-2-naphthoate octaprenyltransferase compare
Dsui_2457 -1.2 -4.5 GTP-binding protein LepA compare
Dsui_2563 -1.2 -1.9 hypothetical protein compare
Dsui_3114 -1.2 -2.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3352 -1.2 -1.7 cAMP-binding protein compare
Dsui_1022 -1.2 -5.9 cell division protein compare
Dsui_1042 -1.2 -2.5 metal-dependent hydrolase compare
Dsui_1457 -1.2 -1.5 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_3309 -1.2 -8.2 nitrous oxide reductase compare
Dsui_3125 -1.1 -5.7 cytochrome c, mono- and diheme variants family compare
Dsui_0005 -1.1 -4.4 putative secreted protein compare
Dsui_2386 -1.1 -2.1 pyruvate-formate lyase-activating enzyme compare
Dsui_3521 -1.1 -3.1 membrane-fusion protein compare
Dsui_1841 -1.1 -2.3 hypothetical protein compare
Dsui_1025 -1.1 -3.0 putative Zn-dependent peptidase compare
Dsui_2781 -1.1 -2.2 PAS domain S-box compare
Dsui_0703 -1.1 -4.0 ribosomal subunit interface protein compare
Dsui_0810 -1.1 -4.8 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_0255 -1.1 -1.0 hypothetical protein compare
Dsui_0197 -1.1 -2.8 hypothetical protein compare
Dsui_1892 -1.1 -3.9 transcriptional regulator compare
Dsui_2306 -1.1 -2.1 transcriptional regulator compare
Dsui_3524 -1.1 -3.1 signal transduction histidine kinase compare
Dsui_2615 -1.1 -4.0 hypothetical protein compare
Dsui_2799 -1.1 -3.5 oligopeptide/dipeptide ABC transporter, ATP-binding protein compare
Dsui_0177 -1.1 -2.5 hypothetical protein compare
Dsui_1412 -1.1 -1.5 chromate transport protein ChrA compare
Dsui_3179 -1.1 -1.4 signal transduction histidine kinase compare
Dsui_3069 -1.0 -1.9 putative membrane protein compare
Dsui_2260 -1.0 -2.1 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_2042 -1.0 -2.2 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_0625 -1.0 -2.4 putative metal-sulfur cluster biosynthetic enzyme compare
Dsui_0811 -1.0 -3.6 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For anaerobic Sodium nitrate in Dechlorosoma suillum PS

For anaerobic Sodium nitrate across organisms