Experiment set2H45 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth in rich media with nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1647 -5.4 -9.5 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_3034 -5.2 -24.6 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_1460 -5.1 -9.2 cAMP-binding protein compare
Dsui_3393 -4.8 -3.3 Kef-type K+ transport system, membrane component compare
Dsui_2151 -4.6 -3.2 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_1177 -4.4 -8.9 Ethylbenzene dehydrogenase compare
Dsui_3080 -4.3 -2.2 molecular chaperone GrpE (heat shock protein) compare
Dsui_1640 -4.2 -4.9 hypothetical protein compare
Dsui_1970 -4.2 -2.9 metalloendopeptidase-like membrane protein compare
Dsui_0007 -4.2 -2.8 cold shock protein compare
Dsui_1176 -4.0 -9.5 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_1576 -4.0 -2.7 dihydrolipoamide dehydrogenase compare
Dsui_1578 -3.8 -3.7 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0964 -3.8 -6.6 putative lipid carrier protein compare
Dsui_0510 -3.7 -6.4 ferredoxin-type protein, NapH/MauN family compare
Dsui_1827 -3.7 -2.5 hypothetical protein compare
Dsui_1321 -3.6 -8.6 ABC-type uncharacterized transport system, permease component compare
Dsui_3102 -3.5 -3.4 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_2153 -3.5 -5.2 molybdopterin converting factor, subunit 1 compare
Dsui_3110 -3.5 -7.0 nitric oxide reductase large subunit compare
Dsui_2696 -3.4 -10.0 (protein-PII) uridylyltransferase compare
Dsui_1170 -3.3 -1.7 heme exporter protein CcmD compare
Dsui_3109 -3.3 -5.9 cytochrome c, mono- and diheme variants family compare
Dsui_0992 -3.3 -2.0 putative membrane protein compare
Dsui_1978 -3.3 -2.2 putative lipoprotein compare
Dsui_3392 -3.2 -6.2 carboxylate-amine ligase, YbdK family compare
Dsui_0508 -3.1 -15.1 periplasmic nitrate reductase, large subunit compare
Dsui_0650 -3.1 -4.2 hypothetical protein compare
Dsui_2189 -3.0 -3.6 acyl-CoA synthetase (NDP forming) compare
Dsui_3054 -3.0 -2.9 phosphate ABC transporter, permease protein PstA compare
Dsui_0004 -3.0 -5.8 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_1398 -3.0 -6.0 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_3139 -2.9 -4.4 outer membrane assembly lipoprotein YfgL compare
Dsui_0745 -2.9 -2.0 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_2152 -2.8 -4.4 molybdenum cofactor synthesis domain protein compare
Dsui_3063 -2.7 -2.6 transcription elongation factor GreA compare
Dsui_0706 -2.7 -1.7 hypothetical protein compare
Dsui_3240 -2.7 -7.1 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3299 -2.6 -12.6 Peroxiredoxin compare
Dsui_0962 -2.6 -8.9 collagenase-like protease compare
Dsui_0963 -2.5 -6.6 collagenase-like protease compare
Dsui_1929 -2.5 -7.5 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_3220 -2.5 -2.2 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_2154 -2.5 -5.8 molybdopterin converting factor, large subunit compare
Dsui_0507 -2.4 -2.8 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_0509 -2.4 -7.3 MauM/NapG family ferredoxin-type protein compare
Dsui_2673 -2.4 -3.7 hypothetical protein compare
Dsui_3126 -2.4 -6.8 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3300 -2.3 -10.3 ABC-2 type transporter compare
Dsui_1084 -2.3 -13.3 bacteriophage protein gp37 compare
Dsui_0465 -2.3 -2.9 ADP-heptose:LPS heptosyltransferase compare
Dsui_2196 -2.2 -2.6 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_1577 -2.2 -2.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1969 -2.2 -7.7 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_1930 -2.2 -7.1 transcriptional regulator compare
Dsui_1399 -2.2 -6.3 conserved hypothetical integral membrane protein compare
Dsui_1947 -2.2 -1.5 nucleotide sugar dehydrogenase compare
Dsui_1931 -2.2 -6.5 transcriptional regulator compare
Dsui_0099 -2.2 -2.6 putative periplasmic or secreted lipoprotein compare
Dsui_1236 -2.2 -7.7 molybdenum cofactor synthesis domain protein compare
Dsui_1403 -2.1 -2.6 putative NTP binding protein (contains STAS domain) compare
Dsui_1402 -2.1 -4.0 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0651 -2.1 -2.8 tyrosine recombinase XerC compare
Dsui_3351 -2.1 -2.4 cytochrome c peroxidase compare
Dsui_3521 -2.1 -5.7 membrane-fusion protein compare
Dsui_1642 -2.1 -7.2 hypothetical protein compare
Dsui_1928 -2.0 -3.9 cytochrome c, mono- and diheme variants family compare
Dsui_1221 -2.0 -5.3 hypothetical protein compare
Dsui_3305 -2.0 -11.1 parallel beta-helix repeat (two copies) compare
Dsui_2687 -2.0 -5.2 RIP metalloprotease RseP compare
Dsui_0401 -2.0 -2.1 nucleoside-diphosphate-sugar epimerase compare
Dsui_1400 -2.0 -7.3 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_2098 -1.9 -1.4 hypothetical protein compare
Dsui_3318 -1.9 -7.3 cytochrome c, mono- and diheme variants family compare
Dsui_2694 -1.9 -2.5 ribosomal protein S2 compare
Dsui_0399 -1.9 -4.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_0432 -1.9 -2.6 hypothetical protein compare
Dsui_1932 -1.8 -3.3 transcriptional regulator compare
Dsui_1235 -1.8 -3.0 hypothetical protein compare
Dsui_2717 -1.8 -2.8 RNA polymerase-binding protein DksA compare
Dsui_2454 -1.8 -5.2 Positive regulator of sigma E activity compare
Dsui_3484 -1.8 -1.7 putative permease compare
Dsui_3301 -1.8 -7.7 NosL compare
Dsui_0563 -1.8 -8.5 molybdate ABC transporter, permease protein compare
Dsui_1325 -1.8 -2.6 ADP-ribose pyrophosphatase compare
Dsui_0252 -1.8 -2.4 TIGR00252 family protein compare
Dsui_0469 -1.8 -1.9 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_3120 -1.8 -2.5 cAMP-binding protein compare
Dsui_3117 -1.7 -3.0 hypothetical protein compare
Dsui_3302 -1.7 -8.3 ABC-type multidrug transport system, ATPase component compare
Dsui_3081 -1.7 -1.6 chaperone protein DnaK compare
Dsui_0608 -1.7 -5.2 nucleoside-diphosphate-sugar epimerase compare
Dsui_3304 -1.7 -8.4 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_3207 -1.7 -1.9 ankyrin repeat-containing protein compare
Dsui_0675 -1.7 -2.2 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2295 -1.6 -2.0 transcriptional regulator compare
Dsui_3532 -1.6 -3.8 Protein of unknown function (DUF3106) compare
Dsui_0562 -1.6 -7.6 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Dsui_1759 -1.6 -2.5 flagellar hook-basal body complex protein FliE compare
Dsui_0564 -1.6 -5.2 molybdenum ABC transporter, ATP-binding protein compare
Dsui_3306 -1.6 -7.9 hypothetical protein compare
Dsui_1682 -1.6 -2.3 biopolymer transport protein compare
Dsui_1251 -1.6 -2.1 acylphosphatase compare
Dsui_3303 -1.6 -8.1 ferredoxin-type protein, NapH/MauN family compare
Dsui_1968 -1.5 -6.8 5''/3''-nucleotidase SurE compare
Dsui_0255 -1.5 -1.4 hypothetical protein compare
Dsui_0520 -1.5 -7.0 transcriptional regulator compare
Dsui_1401 -1.5 -4.2 surface lipoprotein compare
Dsui_3319 -1.5 -4.2 uroporphyrin-III C-methyltransferase compare
Dsui_2981 -1.5 -0.9 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_1442 -1.5 -2.0 putative efflux protein, MATE family compare
Dsui_0434 -1.4 -2.9 ribonuclease, Rne/Rng family compare
Dsui_0500 -1.4 -2.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0457 -1.4 -2.5 Protein of unknown function (DUF2782) compare
Dsui_3096 -1.4 -3.9 NADH dehydrogenase, FAD-containing subunit compare
Dsui_0425 -1.4 -2.9 putative Fe-S oxidoreductase compare
Dsui_2604 -1.4 -2.8 hypothetical protein compare
Dsui_3523 -1.4 -2.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2867 -1.3 -1.7 surface antigen family protein compare
Dsui_1629 -1.3 -1.7 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_0021 -1.3 -1.7 putative metalloendopeptidase compare
Dsui_3150 -1.3 -2.7 electron transfer flavoprotein, beta subunit compare
Dsui_2752 -1.3 -1.8 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_3520 -1.3 -7.7 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_2127 -1.3 -2.0 flavodoxin reductase family protein compare
Dsui_3424 -1.3 -1.8 ATP:cob(I)alamin adenosyltransferase compare
Dsui_2034 -1.3 -2.4 DNA gyrase inhibitor compare
Dsui_0499 -1.3 -1.9 DNA-directed RNA polymerase, omega subunit compare
Dsui_2816 -1.3 -3.4 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1605 -1.3 -3.0 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2355 -1.3 -2.2 cytochrome B561 compare
Dsui_1356 -1.3 -1.6 hypothetical protein compare
Dsui_2769 -1.3 -3.8 large extracellular alpha-helical protein compare
Dsui_0704 -1.3 -5.8 RNA polymerase sigma-54 factor compare
Dsui_2427 -1.3 -4.3 molybdenum cofactor biosynthesis protein A compare
Dsui_2767 -1.3 -2.2 glutaredoxin-like protein compare
Dsui_2678 -1.3 -5.0 hypothetical protein compare
Dsui_2150 -1.3 -2.8 hypothetical protein compare
Dsui_1528 -1.2 -5.8 signal transduction histidine kinase compare
Dsui_3118 -1.2 -2.2 polyferredoxin compare
Dsui_1541 -1.2 -3.6 cytochrome c553 compare
Dsui_1198 -1.2 -4.6 apolipoprotein N-acyltransferase compare
Dsui_2870 -1.2 -1.9 putative permease compare
Dsui_3309 -1.2 -8.3 nitrous oxide reductase compare
Dsui_3307 -1.2 -6.6 cytochrome c553 compare
Dsui_0477 -1.2 -1.7 tol-pal system protein YbgF compare
Dsui_0837 -1.2 -3.3 tRNA modification GTPase TrmE compare
Dsui_0454 -1.2 -1.6 hypothetical protein compare
Dsui_2191 -1.2 -1.9 squalene-associated FAD-dependent desaturase compare
Dsui_3524 -1.2 -3.4 signal transduction histidine kinase compare
Dsui_1119 -1.2 -3.0 glutathione peroxidase compare
Dsui_1377 -1.2 -4.4 phasin family protein compare
Dsui_2560 -1.2 -2.0 zonula occludens toxin compare
Dsui_0003 -1.2 -2.9 putative Zn-dependent protease compare
Dsui_1227 -1.2 -3.4 DNA/RNA helicase, superfamily I compare
Dsui_0703 -1.2 -4.6 ribosomal subunit interface protein compare
Dsui_1652 -1.1 -1.3 FeoA-like protein compare
Dsui_2933 -1.1 -2.4 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1944 -1.1 -6.7 integration host factor, beta subunit compare
Dsui_0537 -1.1 -1.9 conserved protein of DIM6/NTAB family compare
Dsui_1392 -1.1 -2.4 type II secretory pathway, component PulF compare
Dsui_2666 -1.1 -2.2 putative transcriptional regulator compare
Dsui_0967 -1.1 -2.7 hypothetical protein compare
Dsui_0811 -1.1 -4.1 hypothetical protein compare
Dsui_0102 -1.1 -2.8 transcription elongation factor compare
Dsui_0492 -1.1 -2.1 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Dsui_3414 -1.1 -3.6 FAD/FMN-dependent dehydrogenase compare
Dsui_2501 -1.1 -1.6 TniQ protein compare
Dsui_3257 -1.1 -5.9 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_0489 -1.1 -2.7 DNA-binding regulatory protein, YebC/PmpR family compare
Dsui_0192 -1.1 -2.0 hypothetical protein compare
Dsui_0258 -1.1 -2.2 sulfate ABC transporter, ATP-binding protein compare
Dsui_3114 -1.1 -2.5 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3446 -1.1 -5.0 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase compare
Dsui_2703 -1.1 -2.5 chromosome segregation protein SMC compare
Dsui_0810 -1.0 -4.7 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_1534 -1.0 -0.9 ribosomal protein L33 compare
Dsui_0116 -1.0 -2.2 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_3125 -1.0 -6.3 cytochrome c, mono- and diheme variants family compare
Dsui_2888 -1.0 -1.6 stress-induced morphogen compare
Dsui_0133 -1.0 -3.8 hypothetical protein compare
Dsui_1591 -1.0 -1.3 Xaa-Pro aminopeptidase compare
Dsui_1026 -1.0 -2.5 putative Zn-dependent peptidase compare
Dsui_0744 -1.0 -2.5 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_3464 -1.0 -1.7 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Dsui_2457 -1.0 -4.2 GTP-binding protein LepA compare
Dsui_2402 -1.0 -1.0 hypothetical protein compare
Dsui_0893 -1.0 -2.2 rare lipoprotein A compare
Dsui_2799 -1.0 -3.6 oligopeptide/dipeptide ABC transporter, ATP-binding protein compare
Dsui_0747 -1.0 -1.7 glutamate--cysteine ligase compare
Dsui_0039 -1.0 -2.0 dimethyladenosine transferase compare
Dsui_0395 -1.0 -1.3 outer membrane lipoprotein compare
Dsui_2615 -1.0 -3.6 hypothetical protein compare
Dsui_2352 -1.0 -2.5 hypothetical protein compare
Dsui_3097 -1.0 -1.9 O-6-methylguanine DNA methyltransferase compare
Dsui_0259 -1.0 -3.1 sulfate ABC transporter, permease protein CysW compare
Dsui_1891 -1.0 -1.8 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_2123 -1.0 -1.3 EAL domain-containing protein compare
Dsui_3072 -1.0 -3.2 DNA repair protein RecN compare
Dsui_3531 -1.0 -1.5 Protein of unknown function (DUF3619) compare


Specific Phenotypes

For 2 genes in this experiment

For anaerobic Sodium nitrate in Dechlorosoma suillum PS

For anaerobic Sodium nitrate across organisms