Experiment set2H44 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, perchlorate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1581 -6.8 -4.6 response regulator compare
Dsui_3527 -6.5 -2.8 ketol-acid reductoisomerase compare
Dsui_2717 -5.3 -3.6 RNA polymerase-binding protein DksA compare
Dsui_1969 -5.2 -8.6 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_1647 -5.1 -8.5 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_1096 -4.8 -8.1 glutamate synthase family protein compare
Dsui_0704 -4.8 -10.2 RNA polymerase sigma-54 factor compare
Dsui_1578 -4.7 -3.2 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3139 -4.6 -4.5 outer membrane assembly lipoprotein YfgL compare
Dsui_1576 -4.6 -3.1 dihydrolipoamide dehydrogenase compare
Dsui_2152 -4.6 -4.4 molybdenum cofactor synthesis domain protein compare
Dsui_1445 -4.3 -4.1 succinyl-CoA synthetase, beta subunit compare
Dsui_1097 -4.2 -2.9 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_1970 -4.1 -4.8 metalloendopeptidase-like membrane protein compare
Dsui_2816 -4.0 -3.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3081 -4.0 -2.7 chaperone protein DnaK compare
Dsui_2151 -3.9 -4.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_1577 -3.8 -2.6 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0650 -3.7 -4.4 hypothetical protein compare
Dsui_0291 -3.7 -6.3 tellurite resistance protein-like permease compare
Dsui_3181 -3.6 -1.6 RND family efflux transporter, MFP subunit compare
Dsui_1318 -3.5 -7.8 prepilin signal peptidase PulO-like peptidase compare
Dsui_3484 -3.5 -2.3 putative permease compare
Dsui_1084 -3.4 -11.7 bacteriophage protein gp37 compare
Dsui_2154 -3.4 -4.1 molybdopterin converting factor, large subunit compare
Dsui_0146 -3.4 -32.5 DMSO reductase family type II enzyme chaperone compare
Dsui_0147 -3.3 -30.5 hypothetical protein compare
Dsui_0151 -3.3 -32.5 signal transduction histidine kinase compare
Dsui_0150 -3.3 -32.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_0152 -3.3 -32.4 PAS domain S-box compare
Dsui_2189 -3.3 -4.4 acyl-CoA synthetase (NDP forming) compare
Dsui_0401 -3.2 -3.0 nucleoside-diphosphate-sugar epimerase compare
Dsui_2368 -3.2 -2.7 serine O-acetyltransferase compare
Dsui_1283 -3.1 -6.1 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1321 -3.1 -8.0 ABC-type uncharacterized transport system, permease component compare
Dsui_0004 -3.0 -6.7 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_0149 -3.0 -28.1 DMSO reductase family type II enzyme, molybdopterin subunit compare
Dsui_0145 -3.0 -29.4 hypothetical protein compare
Dsui_0144 -3.0 -28.0 nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit compare
Dsui_2935 -3.0 -3.0 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2567 -2.9 -14.3 hypothetical protein compare
Dsui_1348 -2.9 -6.4 hemerythrin-like metal-binding domain-containing protein compare
Dsui_0086 -2.9 -11.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_1759 -2.9 -5.0 flagellar hook-basal body complex protein FliE compare
Dsui_0255 -2.9 -1.9 hypothetical protein compare
Dsui_3208 -2.9 -4.7 cysteine synthase A compare
Dsui_1285 -2.8 -10.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1291 -2.8 -8.8 hypothetical protein compare
Dsui_1646 -2.8 -4.2 cAMP-binding protein compare
Dsui_1290 -2.7 -10.4 hypothetical protein compare
Dsui_1629 -2.7 -2.0 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_1282 -2.7 -6.7 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1978 -2.7 -2.6 putative lipoprotein compare
Dsui_0685 -2.7 -3.1 glutathione S-transferase compare
Dsui_0604 -2.7 -10.9 pilus retraction protein PilT compare
Dsui_0085 -2.7 -15.3 GDP-mannose 4,6-dehydratase compare
Dsui_0143 -2.7 -26.2 Ethylbenzene dehydrogenase compare
Dsui_0087 -2.7 -13.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_2153 -2.6 -8.4 molybdopterin converting factor, subunit 1 compare
Dsui_0148 -2.6 -22.1 DMSO reductase family type II enzyme, iron-sulfur subunit compare
Dsui_1286 -2.6 -11.4 hypothetical protein compare
Dsui_1284 -2.6 -14.1 hypothetical protein compare
Dsui_2703 -2.6 -3.9 chromosome segregation protein SMC compare
Dsui_0039 -2.5 -3.4 dimethyladenosine transferase compare
Dsui_1287 -2.5 -21.7 hypothetical protein compare
Dsui_1288 -2.5 -11.8 hypothetical protein compare
Dsui_0398 -2.5 -6.5 UDP-glucose-4-epimerase compare
Dsui_1279 -2.5 -11.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_1280 -2.4 -14.9 type II secretory pathway, component PulF compare
Dsui_2981 -2.4 -1.5 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_2457 -2.4 -5.1 GTP-binding protein LepA compare
Dsui_2562 -2.4 -2.4 hypothetical protein compare
Dsui_1292 -2.4 -16.7 MSHA-type pilus biogenesis protein MshL compare
Dsui_0563 -2.3 -9.8 molybdate ABC transporter, permease protein compare
Dsui_0964 -2.3 -5.3 putative lipid carrier protein compare
Dsui_1289 -2.3 -11.8 hypothetical protein compare
Dsui_0562 -2.3 -9.6 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Dsui_2433 -2.3 -7.3 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0009 -2.2 -11.4 ATP-dependent Clp protease ATP-binding subunit clpA compare
Dsui_3102 -2.2 -3.0 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_1235 -2.2 -1.8 hypothetical protein compare
Dsui_0564 -2.1 -5.5 molybdenum ABC transporter, ATP-binding protein compare
Dsui_2116 -2.1 -3.0 Fe-dependent oxidoreductase, alcohol dehydrogenase compare
Dsui_2651 -2.1 -1.8 ankyrin repeat-containing protein compare
Dsui_2563 -2.1 -3.6 hypothetical protein compare
Dsui_3220 -2.0 -2.0 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0391 -2.0 -1.7 Protein of unknown function (DUF3426) compare
Dsui_1236 -2.0 -7.0 molybdenum cofactor synthesis domain protein compare
Dsui_1968 -2.0 -7.8 5''/3''-nucleotidase SurE compare
Dsui_0024 -2.0 -2.9 cytochrome c556 compare
Dsui_2694 -2.0 -2.0 ribosomal protein S2 compare
Dsui_0963 -1.9 -4.2 collagenase-like protease compare
Dsui_3069 -1.9 -3.1 putative membrane protein compare
Dsui_3080 -1.9 -1.4 molecular chaperone GrpE (heat shock protein) compare
Dsui_3392 -1.9 -4.3 carboxylate-amine ligase, YbdK family compare
Dsui_0259 -1.9 -4.5 sulfate ABC transporter, permease protein CysW compare
Dsui_0099 -1.9 -1.9 putative periplasmic or secreted lipoprotein compare
Dsui_1446 -1.9 -2.6 succinyl-CoA synthetase, alpha subunit compare
Dsui_1398 -1.9 -3.5 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_2599 -1.8 -1.7 hypothetical protein compare
Dsui_3457 -1.8 -1.4 K+ transporter compare
Dsui_1026 -1.8 -3.2 putative Zn-dependent peptidase compare
Dsui_1399 -1.8 -5.5 conserved hypothetical integral membrane protein compare
Dsui_1425 -1.8 -5.5 putative glutamine amidotransferase compare
Dsui_2617 -1.8 -1.5 DNA recombination-dependent growth factor C compare
Dsui_0258 -1.8 -4.5 sulfate ABC transporter, ATP-binding protein compare
Dsui_1402 -1.8 -3.8 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1016 -1.8 -3.1 tRNA (guanine-N(7)-)-methyltransferase compare
Dsui_0675 -1.8 -2.3 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2727 -1.7 -2.5 hypothetical protein compare
Dsui_0962 -1.7 -7.8 collagenase-like protease compare
Dsui_3448 -1.7 -3.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2150 -1.7 -3.4 hypothetical protein compare
Dsui_0260 -1.7 -5.0 sulfate ABC transporter, permease protein CysT compare
Dsui_0557 -1.7 -1.9 NifQ compare
Dsui_0400 -1.7 -7.3 putative nucleoside-diphosphate sugar epimerase compare
Dsui_2611 -1.6 -2.9 hypothetical protein compare
Dsui_0179 -1.6 -2.4 hypothetical protein compare
Dsui_1002 -1.6 -2.2 prolyl oligopeptidase family protein compare
Dsui_2249 -1.6 -3.6 signal transduction histidine kinase compare
Dsui_1170 -1.6 -0.9 heme exporter protein CcmD compare
Dsui_1992 -1.6 -1.9 ribosomal protein L9 compare
Dsui_2043 -1.6 -2.4 cysteine synthase compare
Dsui_3393 -1.6 -2.9 Kef-type K+ transport system, membrane component compare
Dsui_2882 -1.6 -1.9 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1295 -1.5 -10.1 lipid A core-O-antigen ligase-like enyme compare
Dsui_2086 -1.5 -2.3 cytochrome c compare
Dsui_2556 -1.5 -3.2 hypothetical protein compare
Dsui_3415 -1.5 -6.3 FAD/FMN-dependent dehydrogenase compare
Dsui_0251 -1.5 -2.8 putative S-adenosylmethionine-dependent methyltransferase, YraL family compare
Dsui_0059 -1.5 -7.3 glycosyl transferase compare
Dsui_1400 -1.5 -4.2 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_2973 -1.5 -4.2 putative arginyl-tRNA:protein arginylyltransferase compare
Dsui_2402 -1.5 -1.1 hypothetical protein compare
Dsui_2610 -1.5 -3.0 single-stranded DNA-binding protein compare
Dsui_2540 -1.5 -1.4 ribosomal protein S12 methylthiotransferase RimO compare
Dsui_1281 -1.5 -8.5 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_0192 -1.5 -3.0 hypothetical protein compare
Dsui_0245 -1.5 -1.8 S-adenosyl-methyltransferase MraW compare
Dsui_1059 -1.4 -1.5 thiamine monophosphate synthase compare
Dsui_3464 -1.4 -2.5 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Dsui_1752 -1.4 -2.8 flagellar export protein FliJ compare
Dsui_0079 -1.4 -10.6 pseudaminic acid synthase compare
Dsui_1221 -1.4 -2.6 hypothetical protein compare
Dsui_2331 -1.4 -2.4 heat shock protein compare
Dsui_1737 -1.4 -5.9 flagellar basal-body rod protein FlgG compare
Dsui_2466 -1.4 -1.7 ATP dependent DNA ligase-like protein compare
Dsui_0177 -1.4 -3.1 hypothetical protein compare
Dsui_2230 -1.4 -1.8 conserved hypothetical integral membrane protein compare
Dsui_0871 -1.4 -1.4 hypothetical protein compare
Dsui_2164 -1.4 -2.1 signal transduction histidine kinase compare
Dsui_3508 -1.4 -0.7 exodeoxyribonuclease VII, small subunit compare
Dsui_1800 -1.3 -7.5 transcriptional regulator compare
Dsui_3352 -1.3 -1.9 cAMP-binding protein compare
Dsui_0057 -1.3 -8.6 glycosyltransferase compare
Dsui_0246 -1.3 -4.9 mraZ protein compare
Dsui_0810 -1.3 -4.7 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_3440 -1.3 -2.0 Protein of unknown function (DUF2892) compare
Dsui_1891 -1.3 -2.1 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_3414 -1.3 -5.8 FAD/FMN-dependent dehydrogenase compare
Dsui_1947 -1.3 -1.5 nucleotide sugar dehydrogenase compare
Dsui_0083 -1.3 -11.4 UDP-N-acetylglucosamine 4,6-dehydratase compare
Dsui_0084 -1.3 -9.8 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain compare
Dsui_0703 -1.3 -4.4 ribosomal subunit interface protein compare
Dsui_0077 -1.3 -10.2 putative PLP-dependent enzyme possibly involved in cell wall biogenesis compare
Dsui_2615 -1.3 -4.0 hypothetical protein compare
Dsui_3506 -1.3 -3.8 putative permease, DMT superfamily compare
Dsui_3413 -1.3 -2.9 Fe-S oxidoreductase compare
Dsui_0056 -1.3 -4.5 glycosyl transferase compare
Dsui_0055 -1.3 -4.6 glycosyltransferase compare
Dsui_0080 -1.3 -8.9 pseudaminic acid biosynthesis-associated protein PseG compare
Dsui_0469 -1.2 -1.3 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_0457 -1.2 -1.8 Protein of unknown function (DUF2782) compare
Dsui_0061 -1.2 -9.9 glycosyltransferase compare
Dsui_1745 -1.2 -3.9 flagellar biosynthetic protein FliQ compare
Dsui_0074 -1.2 -11.3 hypothetical protein compare
Dsui_1401 -1.2 -2.8 surface lipoprotein compare
Dsui_2047 -1.2 -2.5 chromate transporter, chromate ion transporter family compare
Dsui_2301 -1.2 -4.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2306 -1.2 -1.6 transcriptional regulator compare
Dsui_0081 -1.2 -8.9 pseudaminic acid CMP-transferase compare
Dsui_2098 -1.2 -0.9 hypothetical protein compare
Dsui_2327 -1.2 -2.9 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_0552 -1.2 -2.0 nitrogen fixation protein NifX compare
Dsui_1755 -1.2 -5.8 flagellar motor switch protein FliG compare
Dsui_0707 -1.2 -2.3 protein RecA compare
Dsui_1757 -1.2 -6.5 signal transduction histidine kinase compare
Dsui_1294 -1.2 -9.2 hypothetical protein compare
Dsui_0434 -1.2 -2.4 ribonuclease, Rne/Rng family compare
Dsui_0076 -1.2 -8.6 acetyltransferase, ribosomal protein N-acetylase compare
Dsui_3030 -1.1 -4.2 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_2687 -1.1 -4.6 RIP metalloprotease RseP compare
Dsui_3268 -1.1 -2.2 exodeoxyribonuclease VII, large subunit compare
Dsui_1370 -1.1 -2.8 putative permease, DMT superfamily compare
Dsui_0058 -1.1 -4.6 Glycosyl transferase family 11 compare
Dsui_2781 -1.1 -2.1 PAS domain S-box compare
Dsui_1495 -1.1 -1.5 molecular chaperone (small heat shock protein) compare
Dsui_1091 -1.1 -6.0 protein-disulfide isomerase compare
Dsui_1022 -1.1 -4.8 cell division protein compare
Dsui_2210 -1.1 -4.1 transcriptional regulator compare


Specific Phenotypes

For 2 genes in this experiment

For anaerobic Sodium D,L-Lactate in Dechlorosoma suillum PS

For anaerobic Sodium D,L-Lactate across organisms