Experiment set2H44 for Marinobacter adhaerens HP15

Compare to:

marine broth with Vancomycin Hydrochloride Hydrate 0.5 mg/ml

Group: stress
Media: marine_broth_2216 + Vancomycin Hydrochloride Hydrate (0.5 mg/ml)
Culturing: Marino_ML2, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=200 rpm
By: Jordan on 9/10/2013
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 683 A3,A4

Specific Phenotypes

For 5 genes in this experiment

For stress Vancomycin Hydrochloride Hydrate in Marinobacter adhaerens HP15

For stress Vancomycin Hydrochloride Hydrate across organisms

SEED Subsystems

Subsystem #Specific
Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1
Phosphate metabolism 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
palmitoleate biosynthesis III (cyanobacteria) 2 1 1
phospholipid remodeling (phosphatidate, yeast) 2 1 1
oleate biosynthesis III (cyanobacteria) 3 2 1
CDP-diacylglycerol biosynthesis I 4 4 1
CDP-diacylglycerol biosynthesis II 4 4 1
CDP-diacylglycerol biosynthesis III 5 3 1
phosphatidate biosynthesis (yeast) 5 3 1
phosphatidylglycerol biosynthesis II 6 6 1
phosphatidylglycerol biosynthesis I 6 6 1
superpathway of phospholipid biosynthesis III (E. coli) 12 11 2
palmitoyl ethanolamide biosynthesis 6 2 1
superpathway of stearidonate biosynthesis (cyanobacteria) 6 2 1
stigma estolide biosynthesis 7 2 1
diacylglycerol and triacylglycerol biosynthesis 7 2 1
anandamide biosynthesis II 8 2 1
anandamide biosynthesis I 12 4 1
superpathway of cardiolipin biosynthesis (bacteria) 13 10 1
superpathway of phospholipid biosynthesis II (plants) 28 10 2
plasmalogen biosynthesis I (aerobic) 16 2 1