Experiment set2H39 for Pseudomonas stutzeri RCH2

Compare to:

Sodium butyrate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_1853 -4.0 -8.5 MoxR-like ATPases compare
Psest_0419 -3.6 -21.9 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) conserved
Psest_1851 -3.4 -9.3 Uncharacterized protein conserved in bacteria conserved
Psest_2014 -3.2 -10.2 Isocitrate lyase (EC 4.1.3.1) (from data) compare
Psest_0262 -2.3 -16.7 PAS domain S-box compare
Psest_1810 -2.2 -14.2 UDP-N-acetylglucosamine 4,6-dehydratase compare
Psest_1825 -2.1 -10.3 Predicted nucleoside-diphosphate sugar epimerases compare
Psest_3204 -2.0 -8.0 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_1703 -1.9 -7.0 Uncharacterized protein conserved in bacteria conserved
Psest_4297 -1.8 -6.8 PAS domain S-box compare
Psest_0465 -1.8 -12.5 Acetyltransferase (isoleucine patch superfamily) compare
Psest_1821 -1.8 -10.0 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_3795 -1.7 -7.1 Glycine/D-amino acid oxidases (deaminating) compare
Psest_3532 -1.6 -6.8 Peptidase propeptide and YPEB domain. compare
Psest_0347 -1.4 -8.9 large component of pyruvate/D-alanine transporter (actP-like) (from data) compare
Psest_3213 -1.4 -5.3 acetate kinase compare
Psest_0464 -1.4 -9.1 Mannosyltransferase OCH1 and related enzymes compare
Psest_0146 -1.3 -5.9 Uncharacterized protein involved in outer membrane biogenesis compare
Psest_0354 -1.2 -6.6 Malate synthase G (EC 2.3.3.9) (from data) compare
Psest_4250 -1.0 -5.8 hypothetical protein compare
Psest_4139 +1.0 7.0 PAS domain S-box compare
Psest_3975 +1.0 7.7 Signal transduction histidine kinase compare
Psest_2614 +1.0 9.1 Predicted glycosyltransferases compare
Psest_3976 +1.1 7.8 PAS domain S-box compare
Psest_1991 +1.1 7.3 Glutathione S-transferase compare
Psest_0636 +1.2 6.9 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein compare
Psest_2609 +1.2 10.1 Glycosyltransferase compare
Psest_3900 +1.3 8.5 Spermidine/putrescine-binding periplasmic protein compare
Psest_4293 +1.3 9.4 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_0264 +1.3 7.2 monofunctional biosynthetic peptidoglycan transglycosylase compare
Psest_3974 +1.4 6.0 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_2441 +1.4 6.8 hypothetical protein compare
Psest_3970 +1.4 7.4 Transcriptional regulator compare
Psest_2461 +1.4 5.6 tRNA 2-selenouridine synthase compare
Psest_2029 +1.7 10.1 Putative arginyl-tRNA:protein arginylyltransferase compare
Psest_1055 +1.7 9.9 Saccharopine dehydrogenase and related proteins compare
Psest_2026 +1.8 6.9 Uncharacterized conserved protein compare
Psest_3235 +2.1 18.1 Protein of unknown function (DUF1329). conserved
Psest_2806 +2.5 12.0 RNA polymerase sigma factor RpoS compare
Psest_1187 +2.5 8.6 exodeoxyribonuclease III compare
Psest_0350 +2.7 11.7 Predicted signal-transduction protein containing cAMP-binding and CBS domains compare
Psest_1569 +2.7 17.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_0541 +3.5 21.4 succinate CoA transferases compare
Psest_0418 +3.6 9.4 diguanylate cyclase (GGDEF) domain conserved


Specific phenotypes for carbon source Sodium butyrate across organisms