Experiment set2H37 for Dechlorosoma suillum PS

Compare to:

R2A with sodium pyruvate

200 most important genes:

  gene name fitness t score description  
Dsui_0862 -4.6 -3.1 hypothetical protein compare
Dsui_3081 -3.0 -2.1 chaperone protein DnaK compare
Dsui_1446 -2.9 -3.5 succinyl-CoA synthetase, alpha subunit compare
Dsui_2172 -2.8 -1.9 transcriptional regulator compare
Dsui_1445 -2.7 -3.2 succinyl-CoA synthetase, beta subunit compare
Dsui_1251 -2.7 -2.6 acylphosphatase compare
Dsui_2531 -2.6 -2.4 uncharacterized protein, YfiH family compare
Dsui_2032 -2.6 -2.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3484 -2.5 -1.7 putative permease compare
Dsui_0465 -2.4 -2.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_3351 -2.3 -2.2 cytochrome c peroxidase compare
Dsui_3327 -2.2 -2.6 cytochrome b compare
Dsui_0990 -2.2 -1.1 putative P-loop-containing kinase compare
Dsui_0617 -2.0 -2.0 hypothetical protein compare
Dsui_2781 -2.0 -2.7 PAS domain S-box compare
Dsui_3440 -2.0 -2.3 Protein of unknown function (DUF2892) compare
Dsui_2086 -2.0 -2.3 cytochrome c compare
Dsui_2166 -2.0 -2.1 Fe2+-dicitrate sensor, membrane component compare
Dsui_1827 -1.9 -1.8 hypothetical protein compare
Dsui_2651 -1.9 -1.9 ankyrin repeat-containing protein compare
Dsui_3014 -1.8 -1.5 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_0174 -1.8 -1.9 hypothetical protein compare
Dsui_1888 -1.8 -1.8 putative domain HDIG-containing protein compare
Dsui_2752 -1.8 -1.7 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_1576 -1.8 -1.7 dihydrolipoamide dehydrogenase compare
Dsui_1179 -1.7 -1.5 ribosome-associated heat shock protein implicated in recycling of 50S subunit compare
Dsui_0469 -1.7 -1.3 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2152 -1.7 -2.8 molybdenum cofactor synthesis domain protein compare
Dsui_1577 -1.7 -1.6 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0306 -1.7 -1.9 putative permease compare
Dsui_0215 -1.6 -1.8 hypothetical protein compare
Dsui_0007 -1.6 -1.3 cold shock protein compare
Dsui_3457 -1.6 -1.4 K+ transporter compare
Dsui_0650 -1.6 -2.6 hypothetical protein compare
Dsui_2995 -1.5 -2.0 hypothetical protein compare
Dsui_1391 -1.5 -2.2 hypothetical protein compare
Dsui_2306 -1.5 -2.3 transcriptional regulator compare
Dsui_3130 -1.5 -1.1 tRNA-Leu compare
Dsui_2981 -1.5 -0.9 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_0434 -1.5 -2.6 ribonuclease, Rne/Rng family compare
Dsui_1581 -1.5 -1.9 response regulator compare
Dsui_0399 -1.4 -2.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_3436 -1.4 -1.9 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase compare
Dsui_2562 -1.4 -1.8 hypothetical protein compare
Dsui_1891 -1.4 -2.2 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_3072 -1.4 -3.3 DNA repair protein RecN compare
Dsui_0901 -1.3 -2.8 hypothetical protein compare
Dsui_1893 -1.3 -1.7 putative membrane protein compare
Dsui_1356 -1.3 -1.5 hypothetical protein compare
Dsui_2933 -1.3 -2.2 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0401 -1.3 -1.5 nucleoside-diphosphate-sugar epimerase compare
Dsui_2935 -1.2 -1.8 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2041 -1.2 -2.1 enoyl-CoA hydratase/carnithine racemase compare
Dsui_0044 -1.2 -2.3 exodeoxyribonuclease III compare
Dsui_1652 -1.2 -1.1 FeoA-like protein compare
Dsui_0859 -1.2 -1.1 hypothetical protein compare
Dsui_0499 -1.2 -1.6 DNA-directed RNA polymerase, omega subunit compare
Dsui_2902 -1.2 -1.1 hypothetical protein compare
Dsui_1495 -1.2 -1.6 molecular chaperone (small heat shock protein) compare
Dsui_1830 -1.2 -1.9 Yip1 domain protein compare
Dsui_0949 -1.2 -1.2 hypothetical protein compare
Dsui_1860 -1.2 -1.9 methyl-accepting chemotaxis protein compare
Dsui_0548 -1.2 -2.8 putative transporter component compare
Dsui_0500 -1.2 -2.1 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3133 -1.2 -1.0 hypothetical protein compare
Dsui_2252 -1.2 -2.3 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_3495 -1.2 -1.0 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_2543 -1.1 -1.5 hypothetical protein compare
Dsui_2443 -1.1 -1.5 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_2226 -1.1 -2.4 DNA-binding domain-containing protein, AraC-type compare
Dsui_0675 -1.1 -1.5 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2094 -1.1 -1.8 putative autotransporter protein compare
Dsui_2164 -1.1 -1.7 signal transduction histidine kinase compare
Dsui_2196 -1.1 -1.9 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_2767 -1.1 -1.8 glutaredoxin-like protein compare
Dsui_3178 -1.1 -1.8 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_2556 -1.1 -2.5 hypothetical protein compare
Dsui_2870 -1.1 -1.6 putative permease compare
Dsui_1388 -1.0 -2.0 hypothetical protein compare
Dsui_2355 -1.0 -1.5 cytochrome B561 compare
Dsui_0099 -1.0 -2.5 putative periplasmic or secreted lipoprotein compare
Dsui_0176 -1.0 -2.2 ribosome modulation factor compare
Dsui_3181 -1.0 -0.7 RND family efflux transporter, MFP subunit compare
Dsui_2316 -1.0 -1.1 hypothetical protein compare
Dsui_0687 -1.0 -1.2 Protein of unknown function (DUF2905) compare
Dsui_1607 -1.0 -1.3 putative membrane-associated protein compare
Dsui_1004 -1.0 -0.7 conserved protein of DIM6/NTAB family compare
Dsui_2045 -1.0 -1.6 hypothetical protein compare
Dsui_1325 -1.0 -2.2 ADP-ribose pyrophosphatase compare
Dsui_1675 -1.0 -1.0 hypothetical protein compare
Dsui_0255 -1.0 -0.9 hypothetical protein compare
Dsui_2666 -1.0 -1.5 putative transcriptional regulator compare
Dsui_1974 -1.0 -1.8 hypothetical protein compare
Dsui_3295 -1.0 -2.2 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_2271 -1.0 -2.1 hypothetical protein compare
Dsui_2090 -1.0 -1.3 transcriptional regulator compare
Dsui_1874 -1.0 -1.7 hypothetical protein compare
Dsui_1578 -1.0 -2.4 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0275 -1.0 -1.8 conserved hypothetical protein, proteobacterial compare
Dsui_2949 -1.0 -1.5 Fe2+-dicitrate sensor, membrane component compare
Dsui_3006 -0.9 -2.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_3343 -0.9 -1.4 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_1381 -0.9 -0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_0745 -0.9 -1.1 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_2368 -0.9 -2.2 serine O-acetyltransferase compare
Dsui_0454 -0.9 -1.1 hypothetical protein compare
Dsui_0937 -0.9 -1.9 hypothetical protein compare
Dsui_2221 -0.9 -2.4 putative ATPase compare
Dsui_1393 -0.9 -1.7 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2908 -0.9 -2.1 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0477 -0.9 -1.6 tol-pal system protein YbgF compare
Dsui_0102 -0.9 -1.6 transcription elongation factor compare
Dsui_3379 -0.9 -1.9 S-methyl-5-thioribose-1-phosphate isomerase compare
Dsui_3455 -0.9 -2.8 HD-GYP domain-containing protein compare
Dsui_3270 -0.9 -1.7 2'-5' RNA ligase compare
Dsui_3503 -0.9 -1.4 protein of unknown function (DUF1992) compare
Dsui_0691 -0.9 -1.4 hypothetical protein compare
Dsui_3069 -0.9 -1.1 putative membrane protein compare
Dsui_2122 -0.9 -1.5 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_1198 -0.9 -2.8 apolipoprotein N-acyltransferase compare
Dsui_2402 -0.9 -0.8 hypothetical protein compare
Dsui_2578 -0.8 -1.6 hypothetical protein compare
Dsui_0316 -0.8 -1.6 hypothetical protein compare
Dsui_0992 -0.8 -1.1 putative membrane protein compare
Dsui_2256 -0.8 -2.0 flavodoxin reductase family protein compare
Dsui_2348 -0.8 -1.6 hypothetical protein compare
Dsui_0476 -0.8 -1.8 organic radical activating enzyme compare
Dsui_2958 -0.8 -2.0 cobalt transport protein ATP-binding subunit compare
Dsui_1443 -0.8 -1.9 phenylacetate-CoA ligase compare
Dsui_1094 -0.8 -1.2 shikimate kinase compare
Dsui_0394 -0.8 -2.4 sugar kinase, ribokinase compare
Dsui_2965 -0.8 -1.1 cobalamin biosynthesis protein CbiG compare
Dsui_0537 -0.8 -1.3 conserved protein of DIM6/NTAB family compare
Dsui_1833 -0.8 -1.4 nitrate transport ATP-binding subunits C and D compare
Dsui_3469 -0.8 -1.3 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0657 -0.8 -2.9 methyl-accepting chemotaxis protein compare
Dsui_2117 -0.8 -1.1 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit compare
Dsui_0569 -0.8 -1.4 hypothetical protein compare
Dsui_1620 -0.8 -1.9 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2143 -0.8 -0.9 hypothetical protein compare
Dsui_2305 -0.8 -2.8 electron transfer flavoprotein, beta subunit compare
Dsui_2950 -0.8 -3.0 TonB-dependent siderophore receptor compare
Dsui_1945 -0.8 -2.6 uncharacterized integral membrane protein compare
Dsui_2498 -0.8 -1.1 mercuric resistance transcriptional repressor protein MerD compare
Dsui_3240 -0.8 -3.7 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3168 -0.8 -1.2 hypothetical protein compare
Dsui_0614 -0.8 -1.1 hypothetical protein compare
Dsui_0248 -0.8 -1.6 Protein of unknown function (DUF3025) compare
Dsui_3524 -0.7 -2.1 signal transduction histidine kinase compare
Dsui_1928 -0.7 -1.9 cytochrome c, mono- and diheme variants family compare
Dsui_2798 -0.7 -2.0 arabinose efflux permease family protein compare
Dsui_0421 -0.7 -1.6 carbonic anhydrase compare
Dsui_1848 -0.7 -1.0 arsenical-resistance protein compare
Dsui_3007 -0.7 -0.9 hydrogenase assembly chaperone HypC/HupF compare
Dsui_2606 -0.7 -1.5 soluble lytic murein transglycosylase-like protein compare
Dsui_2642 -0.7 -1.8 outer membrane protein compare
Dsui_1313 -0.7 -1.8 Barstar, RNAse (barnase) inhibitor compare
Dsui_1600 -0.7 -3.0 putative enzyme of heme biosynthesis compare
Dsui_3504 -0.7 -1.4 rhodanese-related sulfurtransferase compare
Dsui_3171 -0.7 -1.1 putative protein-disulfide isomerase compare
Dsui_0260 -0.7 -2.4 sulfate ABC transporter, permease protein CysT compare
Dsui_1640 -0.7 -1.6 hypothetical protein compare
Dsui_2553 -0.7 -1.3 Phage X family/Phage replication protein CRI compare
Dsui_0621 -0.7 -0.8 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0175 -0.7 -1.0 hypothetical protein compare
Dsui_3080 -0.7 -0.7 molecular chaperone GrpE (heat shock protein) compare
Dsui_2138 -0.7 -1.3 putative esterase compare
Dsui_2457 -0.7 -1.9 GTP-binding protein LepA compare
Dsui_2821 -0.7 -1.2 K+ transport system, NAD-binding component compare
Dsui_1402 -0.7 -1.3 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2609 -0.7 -1.1 hypothetical protein compare
Dsui_2386 -0.7 -1.0 pyruvate-formate lyase-activating enzyme compare
Dsui_2125 -0.7 -1.7 PAS domain S-box compare
Dsui_1097 -0.7 -1.4 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_2620 -0.7 -2.8 hypothetical protein compare
Dsui_0122 -0.7 -1.0 D-tyrosyl-tRNA(Tyr) deacylase compare
Dsui_3118 -0.7 -0.7 polyferredoxin compare
Dsui_0656 -0.7 -3.4 chemotaxis protein histidine kinase-like protein compare
Dsui_2842 -0.6 -2.3 radical SAM pair-associated protein compare
Dsui_0435 -0.6 -1.2 Sel1 repeat protein compare
Dsui_1964 -0.6 -1.3 integration host factor, alpha subunit compare
Dsui_2235 -0.6 -1.0 hypothetical protein compare
Dsui_0201 -0.6 -1.4 hypothetical protein compare
Dsui_1273 -0.6 -1.4 Rhodanese-related sulfurtransferase compare
Dsui_2985 -0.6 -1.5 endonuclease III compare
Dsui_2559 -0.6 -1.4 Protein of unknown function (DUF2523) compare
Dsui_2783 -0.6 -0.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3323 -0.6 -1.3 tRNA-guanine transglycosylase, queuosine-34-forming compare
Dsui_2608 -0.6 -2.6 topoisomerase IA compare
Dsui_0258 -0.6 -1.5 sulfate ABC transporter, ATP-binding protein compare
Dsui_0520 -0.6 -2.9 transcriptional regulator compare
Dsui_1523 -0.6 -1.6 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_3522 -0.6 -1.9 outer membrane protein compare
Dsui_2972 -0.6 -1.8 leucyl/phenylalanyl-tRNA--protein transferase compare
Dsui_1357 -0.6 -0.9 hypothetical protein compare
Dsui_1197 -0.6 -2.0 putative Mg2+ and Co2+ transporter CorC compare
Dsui_3429 -0.6 -1.3 RND family efflux transporter, MFP subunit compare
Dsui_2034 -0.6 -0.9 DNA gyrase inhibitor compare
Dsui_0209 -0.6 -1.3 hypothetical protein compare
Dsui_2707 -0.6 -1.2 putative permease compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium pyruvate across organisms