Experiment set2H35 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, chlorate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2198 +3.0 18.7 ATP-dependent protease La compare
Dsui_2678 +2.2 15.8 hypothetical protein compare
Dsui_3239 +2.0 18.0 acetyl-CoA acetyltransferase compare
Dsui_1588 +1.8 12.3 aminoglycoside phosphotransferase compare
Dsui_0078 +1.8 15.3 putative dehydrogenase compare
Dsui_0500 +1.7 6.1 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0635 +1.7 10.7 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_0638 +1.6 12.1 ABC-type polar amino acid transport system, ATPase component compare
Dsui_0636 +1.5 10.6 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_0660 +1.5 8.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0543 +1.4 8.5 malic enzyme compare
Dsui_0637 +1.4 8.4 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_0499 +1.4 4.6 DNA-directed RNA polymerase, omega subunit compare
Dsui_1304 +1.3 3.3 cytochrome c553 compare
Dsui_2538 +1.3 6.7 acetoacetyl-CoA reductase compare
Dsui_0990 +1.2 1.4 putative P-loop-containing kinase compare
Dsui_2927 +1.2 2.8 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_3104 +1.1 8.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3295 +1.1 5.2 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_3213 +1.1 4.8 CBS domain-containing protein compare
Dsui_0131 +1.1 9.5 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_0134 +1.1 6.5 negative regulator of beta-lactamase expression compare
Dsui_1059 +1.1 2.2 thiamine monophosphate synthase compare
Dsui_2704 +1.0 4.8 yecA family protein compare
Dsui_3007 +1.0 2.5 hydrogenase assembly chaperone HypC/HupF compare
Dsui_2705 +1.0 4.5 permease compare
Dsui_1233 +1.0 6.4 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_0784 +1.0 7.6 hypothetical protein compare
Dsui_2921 +0.9 2.8 isochorismate synthase family protein compare
Dsui_1946 +0.9 5.0 putative N-acetylglucosaminyl transferase compare
Dsui_0220 +0.9 6.6 2-phosphoglycolate phosphatase compare
Dsui_0327 +0.9 3.0 transcriptional regulator compare
Dsui_1653 +0.9 6.0 ferrous iron transporter FeoB compare
Dsui_0014 +0.9 5.9 putative membrane protein compare
Dsui_2195 +0.8 6.2 trigger factor compare
Dsui_1060 +0.8 4.2 putative ATPase (AAA+ superfamily) compare
Dsui_3413 +0.8 2.8 Fe-S oxidoreductase compare
Dsui_0257 +0.8 3.9 hypothetical protein compare
Dsui_2977 +0.8 2.3 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1955 +0.8 3.9 3'-5' exonuclease compare
Dsui_3508 +0.8 1.1 exodeoxyribonuclease VII, small subunit compare
Dsui_3103 +0.8 5.3 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_2539 +0.8 1.7 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_1274 +0.8 4.2 Glutaredoxin, GrxC family compare
Dsui_1351 +0.7 3.3 DNA/RNA helicase, superfamily II compare
Dsui_2027 +0.7 1.6 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_0125 +0.7 1.4 NAD-dependent aldehyde dehydrogenase compare
Dsui_3290 +0.7 1.8 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_2547 +0.7 5.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3105 +0.7 4.4 CBS domain-containing protein compare
Dsui_0626 +0.7 3.3 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_1664 +0.7 3.0 putative periplasmic protein compare
Dsui_2970 +0.7 2.8 putative Fe-S oxidoreductase compare
Dsui_2913 +0.7 2.4 dihydroxynaphthoate synthase compare
Dsui_3416 +0.7 0.9 transcriptional regulator compare
Dsui_0215 +0.7 1.3 hypothetical protein compare
Dsui_1162 +0.6 3.8 (NiFe) hydrogenase maturation protein HypF compare
Dsui_1725 +0.6 5.1 ATPase involved in chromosome partitioning compare
Dsui_3404 +0.6 2.0 glutamine synthetase adenylyltransferase compare
Dsui_2708 +0.6 4.3 succinyldiaminopimelate transaminase compare
Dsui_0657 +0.6 4.1 methyl-accepting chemotaxis protein compare
Dsui_1297 +0.6 2.4 biotin synthetase compare
Dsui_0135 +0.6 4.4 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_3128 +0.6 4.6 ribonuclease R compare
Dsui_3171 +0.6 1.2 putative protein-disulfide isomerase compare
Dsui_1425 +0.6 3.3 putative glutamine amidotransferase compare
Dsui_1869 +0.6 2.9 hypothetical protein compare
Dsui_1163 +0.6 3.1 hydrogenase accessory protein HypB compare
Dsui_2424 +0.6 1.5 hypothetical protein compare
Dsui_0630 +0.6 4.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2465 +0.6 1.8 beta-glucosidase-like glycosyl hydrolase compare
Dsui_0042 +0.6 1.0 Protein of unknown function (DUF2892) compare
Dsui_2706 +0.6 2.1 adenine phosphoribosyltransferase compare
Dsui_1363 +0.6 3.1 hypothetical protein compare
Dsui_3496 +0.6 3.2 sulfite oxidase-like oxidoreductase compare
Dsui_3130 +0.6 0.8 tRNA-Leu compare
Dsui_2695 +0.6 4.1 methionine aminopeptidase, type I compare
Dsui_2809 +0.6 1.2 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_2072 +0.6 1.8 Pirin-related protein compare
Dsui_3232 +0.6 1.8 activator of osmoprotectant transporter ProP compare
Dsui_1180 +0.6 2.1 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein compare
Dsui_2137 +0.6 1.6 queuosine biosynthesis protein QueD compare
Dsui_2221 +0.6 2.1 putative ATPase compare
Dsui_1911 +0.6 2.1 ParB-like partition protein compare
Dsui_1460 +0.6 4.1 cAMP-binding protein compare
Dsui_1996 +0.5 4.0 PhoH family protein compare
Dsui_2148 +0.5 3.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0725 +0.5 1.7 putative hydrolase of the alpha/beta superfamily compare
Dsui_3428 +0.5 1.7 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Dsui_3095 +0.5 1.6 Protein of unknown function (DUF2726) compare
Dsui_1526 +0.5 1.4 hypothetical protein compare
Dsui_1663 +0.5 2.9 ABC-type Co2+ transport system, periplasmic component compare
Dsui_1652 +0.5 1.0 FeoA-like protein compare
Dsui_2321 +0.5 2.9 site-specific recombinase compare
Dsui_1037 +0.5 0.6 ribosomal protein L25, Ctc-form compare
Dsui_1159 +0.5 3.0 hydrogenase expression/formation protein HypD compare
Dsui_2269 +0.5 0.7 SOS regulatory protein LexA compare
Dsui_0749 +0.5 4.1 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2756 +0.5 1.3 hypothetical protein compare
Dsui_3283 +0.5 3.0 formate dehydrogenase accessory protein FdhE compare
Dsui_3314 +0.5 1.2 biopolymer transport protein compare
Dsui_1932 +0.5 2.2 transcriptional regulator compare
Dsui_2797 +0.5 3.9 LysM repeat-containing protein compare
Dsui_2652 +0.5 2.7 hydrolase, TatD family compare
Dsui_2097 +0.5 1.7 putative phosphohydrolase compare
Dsui_0567 +0.5 1.4 molybdenum-pterin binding domain protein compare
Dsui_1995 +0.5 2.5 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_0690 +0.5 2.8 hypothetical protein compare
Dsui_0895 +0.5 2.1 nitrogen regulatory protein PII compare
Dsui_2765 +0.5 2.4 putative membrane protein compare
Dsui_1367 +0.5 2.5 crcB protein compare
Dsui_2421 +0.5 3.4 EAL domain-containing protein compare
Dsui_1997 +0.5 1.6 Peroxiredoxin compare
Dsui_3016 +0.5 1.7 hypothetical protein compare
Dsui_2653 +0.5 2.1 Tfp pilus assembly protein PilZ compare
Dsui_2758 +0.5 1.8 putative SAM-dependent methyltransferase compare
Dsui_2360 +0.5 2.3 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_0656 +0.5 3.4 chemotaxis protein histidine kinase-like protein compare
Dsui_2757 +0.5 1.6 spermidine synthase compare
Dsui_0958 +0.5 2.2 ferredoxin compare
Dsui_3375 +0.5 0.6 hypothetical protein compare
Dsui_2294 +0.5 2.1 phasin family protein compare
Dsui_3450 +0.4 3.0 acetyl-CoA hydrolase compare
Dsui_2874 +0.4 2.9 putative periplasmic/secreted protein compare
Dsui_2985 +0.4 1.8 endonuclease III compare
Dsui_1152 +0.4 2.5 Ni,Fe-hydrogenase I large subunit compare
Dsui_2273 +0.4 2.1 TonB-dependent siderophore receptor compare
Dsui_2186 +0.4 1.4 Protein of unknown function (DUF3567) compare
Dsui_0128 +0.4 3.7 D-alanyl-D-alanine carboxypeptidase compare
Dsui_0429 +0.4 1.6 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_2441 +0.4 3.6 putative methyltransferase compare
Dsui_2090 +0.4 1.1 transcriptional regulator compare
Dsui_1197 +0.4 2.7 putative Mg2+ and Co2+ transporter CorC compare
Dsui_1164 +0.4 2.3 hydrogenase nickel insertion protein HypA compare
Dsui_2394 +0.4 2.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2059 +0.4 2.0 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_2331 +0.4 1.2 heat shock protein compare
Dsui_3144 +0.4 2.7 type IV pilus biogenesis/stability protein PilW compare
Dsui_0230 +0.4 2.0 hypothetical protein compare
Dsui_3083 +0.4 2.6 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0628 +0.4 2.5 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_1444 +0.4 3.2 Protein of unknown function (DUF2889) compare
Dsui_2606 +0.4 0.9 soluble lytic murein transglycosylase-like protein compare
Dsui_0739 +0.4 3.3 Major Facilitator Superfamily transporter compare
Dsui_1251 +0.4 0.8 acylphosphatase compare
Dsui_0299 +0.4 2.1 acetyltransferase compare
Dsui_0405 +0.4 2.7 type I secretion outer membrane protein, TolC family compare
Dsui_1438 +0.4 1.4 putative NTP binding protein (contains STAS domain) compare
Dsui_2870 +0.4 1.2 putative permease compare
Dsui_2334 +0.4 2.0 tRNA-dihydrouridine synthase compare
Dsui_1868 +0.4 2.6 HD-GYP domain-containing protein compare
Dsui_0306 +0.4 1.1 putative permease compare
Dsui_2131 +0.4 2.8 tRNA-Arg compare
Dsui_0118 +0.4 1.4 monothiol glutaredoxin, Grx4 family compare
Dsui_2943 +0.4 2.8 ABC-type spermidine/putrescine transport system, ATPase component compare
Dsui_2536 +0.4 2.5 hypothetical protein compare
Dsui_0494 +0.4 3.0 ribonuclease PH compare
Dsui_1263 +0.4 2.6 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Dsui_2771 +0.4 1.8 hypothetical protein compare
Dsui_1590 +0.4 1.3 hypothetical protein compare
Dsui_2324 +0.4 2.1 hypothetical protein compare
Dsui_0109 +0.4 2.0 response regulator of the LytR/AlgR family compare
Dsui_1434 +0.4 2.3 methylase of chemotaxis methyl-accepting protein compare
Dsui_0106 +0.4 1.2 hypothetical protein compare
Dsui_1885 +0.4 2.2 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1750 +0.4 2.3 flagellar basal body-associated protein compare
Dsui_1566 +0.4 1.5 inositol monophosphatase/fructose-1,6-bisphosphatase family protein compare
Dsui_2736 +0.4 2.1 glycine cleavage system H protein compare
Dsui_2751 +0.4 2.8 cyanophycin synthetase compare
Dsui_1579 +0.4 2.5 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1567 +0.4 2.0 Peroxiredoxin compare
Dsui_0214 +0.4 1.4 TIGR02594 family protein compare
Dsui_0585 +0.4 1.7 ABC-type metal ion transport system, periplasmic component/surface adhesin compare
Dsui_0949 +0.4 0.8 hypothetical protein compare
Dsui_0406 +0.4 1.1 Rhodanese-related sulfurtransferase compare
Dsui_2181 +0.4 1.0 DNA-binding domain-containing protein, AraC-type compare
Dsui_0595 +0.4 1.6 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Dsui_1151 +0.4 2.6 transcriptional regulator compare
Dsui_0052 +0.4 2.5 pyruvate kinase compare
Dsui_1518 +0.4 2.1 putative permease compare
Dsui_0297 +0.4 1.7 sugar fermentation stimulation protein compare
Dsui_0045 +0.4 2.2 glutaredoxin-like protein compare
Dsui_0047 +0.4 1.5 putative integral membrane protein compare
Dsui_1657 +0.4 2.4 carbohydrate-selective porin compare
Dsui_2748 +0.4 1.0 hypothetical protein compare
Dsui_0476 +0.4 1.3 organic radical activating enzyme compare
Dsui_0394 +0.4 1.8 sugar kinase, ribokinase compare
Dsui_1994 +0.4 0.9 NADPH-dependent FMN reductase compare
Dsui_2541 +0.4 2.0 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_0738 +0.4 0.9 secondary thiamine-phosphate synthase enzyme compare
Dsui_3205 +0.4 1.7 pseudouridine synthase, RluA family compare
Dsui_0629 +0.4 2.3 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_1003 +0.4 1.9 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_1312 +0.4 1.5 NTP pyrophosphohydrolase compare
Dsui_1158 +0.4 1.8 hydrogenase expression/formation protein HypE compare
Dsui_0753 +0.4 2.3 ATPase component of ABC transporters with duplicated ATPase domain compare
Dsui_0328 +0.4 2.6 fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly compare
Dsui_2659 +0.4 0.8 cold shock protein compare
Dsui_1524 +0.4 1.9 transcriptional regulator compare
Dsui_0945 +0.4 2.0 Iron-sulfur cluster assembly accessory protein compare


Specific Phenotypes

For 1 genes in this experiment

For anaerobic Sodium D,L-Lactate in Dechlorosoma suillum PS

For anaerobic Sodium D,L-Lactate across organisms