Experiment set2H34 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, chlorate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2198 +3.0 17.4 ATP-dependent protease La compare
Dsui_2678 +2.4 13.5 hypothetical protein compare
Dsui_1588 +1.9 13.6 aminoglycoside phosphotransferase compare
Dsui_3239 +1.7 6.6 acetyl-CoA acetyltransferase compare
Dsui_0635 +1.7 12.0 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_0078 +1.6 11.0 putative dehydrogenase compare
Dsui_0636 +1.6 13.3 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_0638 +1.6 11.5 ABC-type polar amino acid transport system, ATPase component compare
Dsui_0637 +1.5 9.5 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_0660 +1.5 9.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0500 +1.5 6.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2704 +1.4 6.3 yecA family protein compare
Dsui_2538 +1.4 8.2 acetoacetyl-CoA reductase compare
Dsui_0499 +1.3 4.2 DNA-directed RNA polymerase, omega subunit compare
Dsui_0134 +1.2 7.0 negative regulator of beta-lactamase expression compare
Dsui_0543 +1.2 6.9 malic enzyme compare
Dsui_2705 +1.2 3.8 permease compare
Dsui_3295 +1.2 4.1 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_0990 +1.1 1.1 putative P-loop-containing kinase compare
Dsui_3416 +1.1 2.3 transcriptional regulator compare
Dsui_3133 +1.1 1.9 hypothetical protein compare
Dsui_0784 +1.1 8.0 hypothetical protein compare
Dsui_3103 +1.1 6.5 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_3213 +1.1 4.2 CBS domain-containing protein compare
Dsui_3104 +1.0 7.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1652 +1.0 1.7 FeoA-like protein compare
Dsui_2757 +1.0 4.4 spermidine synthase compare
Dsui_1304 +1.0 2.9 cytochrome c553 compare
Dsui_0131 +0.9 8.0 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_0220 +0.9 6.4 2-phosphoglycolate phosphatase compare
Dsui_1946 +0.9 6.8 putative N-acetylglucosaminyl transferase compare
Dsui_1590 +0.9 3.1 hypothetical protein compare
Dsui_0125 +0.9 4.8 NAD-dependent aldehyde dehydrogenase compare
Dsui_1233 +0.9 4.6 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_2659 +0.9 5.4 cold shock protein compare
Dsui_1266 +0.9 1.5 transcriptional regulator NrdR compare
Dsui_0327 +0.9 2.8 transcriptional regulator compare
Dsui_2706 +0.9 2.4 adenine phosphoribosyltransferase compare
Dsui_2733 +0.8 2.3 bacterioferritin compare
Dsui_1955 +0.8 3.8 3'-5' exonuclease compare
Dsui_2927 +0.8 1.7 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_2913 +0.8 2.8 dihydroxynaphthoate synthase compare
Dsui_3105 +0.8 4.7 CBS domain-containing protein compare
Dsui_1059 +0.8 1.8 thiamine monophosphate synthase compare
Dsui_1653 +0.8 4.4 ferrous iron transporter FeoB compare
Dsui_0631 +0.8 2.1 cytochrome c551/c552 compare
Dsui_1351 +0.8 4.1 DNA/RNA helicase, superfamily II compare
Dsui_3413 +0.8 3.6 Fe-S oxidoreductase compare
Dsui_1530 +0.8 1.9 hypothetical protein compare
Dsui_3007 +0.8 1.6 hydrogenase assembly chaperone HypC/HupF compare
Dsui_0630 +0.8 5.9 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2756 +0.8 1.5 hypothetical protein compare
Dsui_2465 +0.8 2.9 beta-glucosidase-like glycosyl hydrolase compare
Dsui_0626 +0.7 3.1 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_0257 +0.7 3.4 hypothetical protein compare
Dsui_0628 +0.7 4.2 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_1566 +0.7 2.9 inositol monophosphatase/fructose-1,6-bisphosphatase family protein compare
Dsui_2708 +0.7 4.2 succinyldiaminopimelate transaminase compare
Dsui_2736 +0.7 3.7 glycine cleavage system H protein compare
Dsui_1363 +0.7 4.1 hypothetical protein compare
Dsui_1381 +0.7 1.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_2547 +0.7 5.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2195 +0.7 3.8 trigger factor compare
Dsui_1158 +0.6 4.4 hydrogenase expression/formation protein HypE compare
Dsui_0135 +0.6 4.6 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2395 +0.6 2.3 hypothetical protein compare
Dsui_0979 +0.6 2.6 TIGR00730 family protein compare
Dsui_2137 +0.6 1.6 queuosine biosynthesis protein QueD compare
Dsui_0725 +0.6 2.3 putative hydrolase of the alpha/beta superfamily compare
Dsui_1451 +0.6 1.7 FHA domain-containing protein compare
Dsui_0045 +0.6 3.2 glutaredoxin-like protein compare
Dsui_0749 +0.6 4.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1664 +0.6 2.4 putative periplasmic protein compare
Dsui_2148 +0.6 3.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0014 +0.6 3.8 putative membrane protein compare
Dsui_0405 +0.6 4.3 type I secretion outer membrane protein, TolC family compare
Dsui_1060 +0.6 2.3 putative ATPase (AAA+ superfamily) compare
Dsui_0656 +0.6 4.0 chemotaxis protein histidine kinase-like protein compare
Dsui_1159 +0.6 3.8 hydrogenase expression/formation protein HypD compare
Dsui_1252 +0.6 3.8 hypothetical protein compare
Dsui_0316 +0.6 2.2 hypothetical protein compare
Dsui_1524 +0.6 3.9 transcriptional regulator compare
Dsui_2424 +0.6 1.3 hypothetical protein compare
Dsui_2050 +0.6 2.2 hypothetical protein compare
Dsui_0657 +0.6 3.5 methyl-accepting chemotaxis protein compare
Dsui_1947 +0.6 0.9 nucleotide sugar dehydrogenase compare
Dsui_1037 +0.6 0.6 ribosomal protein L25, Ctc-form compare
Dsui_1274 +0.6 1.6 Glutaredoxin, GrxC family compare
Dsui_1162 +0.6 2.7 (NiFe) hydrogenase maturation protein HypF compare
Dsui_2126 +0.6 0.7 alanine dehydrogenase compare
Dsui_3261 +0.5 3.1 6-phosphofructokinase compare
Dsui_2922 +0.5 2.3 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
Dsui_1832 +0.5 2.2 nitrate ABC transporter, permease protein compare
Dsui_0019 +0.5 2.8 malate synthase A compare
Dsui_0042 +0.5 0.9 Protein of unknown function (DUF2892) compare
Dsui_2221 +0.5 2.6 putative ATPase compare
Dsui_2695 +0.5 3.2 methionine aminopeptidase, type I compare
Dsui_2544 +0.5 3.1 disulfide bond chaperone compare
Dsui_0118 +0.5 2.1 monothiol glutaredoxin, Grx4 family compare
Dsui_1205 +0.5 3.0 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3247 +0.5 3.2 Protein of unknown function (DUF2788) compare
Dsui_1526 +0.5 1.3 hypothetical protein compare
Dsui_1567 +0.5 3.0 Peroxiredoxin compare
Dsui_2536 +0.5 2.2 hypothetical protein compare
Dsui_3232 +0.5 0.8 activator of osmoprotectant transporter ProP compare
Dsui_2441 +0.5 4.2 putative methyltransferase compare
Dsui_0583 +0.5 1.5 ABC-type Mn2+/Zn2+ transport system, permease component compare
Dsui_1263 +0.5 4.0 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Dsui_1164 +0.5 2.6 hydrogenase nickel insertion protein HypA compare
Dsui_0043 +0.5 2.9 cAMP-binding protein compare
Dsui_1911 +0.5 2.2 ParB-like partition protein compare
Dsui_0972 +0.5 3.6 Zn-dependent hydrolase, glyoxylase compare
Dsui_3101 +0.5 1.7 transcriptional regulator compare
Dsui_2740 +0.5 1.1 putative integral membrane protein compare
Dsui_3083 +0.5 3.1 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0292 +0.5 1.7 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_3428 +0.5 1.1 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain compare
Dsui_1615 +0.5 1.8 hypothetical protein compare
Dsui_1179 +0.5 0.9 ribosome-associated heat shock protein implicated in recycling of 50S subunit compare
Dsui_0047 +0.5 2.7 putative integral membrane protein compare
Dsui_3404 +0.5 1.7 glutamine synthetase adenylyltransferase compare
Dsui_1425 +0.5 2.5 putative glutamine amidotransferase compare
Dsui_2532 +0.5 1.8 tripartite ATP-independent periplasmic transporter solute receptor, DctP family compare
Dsui_3127 +0.5 1.2 23S RNA-specific pseudouridylate synthase compare
Dsui_3482 +0.5 3.1 Na+/H+ dicarboxylate symporter compare
Dsui_2772 +0.5 2.2 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_2359 +0.5 1.5 hypothetical protein compare
Dsui_3095 +0.5 1.3 Protein of unknown function (DUF2726) compare
Dsui_2315 +0.5 1.8 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_0106 +0.5 1.6 hypothetical protein compare
Dsui_1163 +0.5 2.1 hydrogenase accessory protein HypB compare
Dsui_2178 +0.5 1.6 hypothetical protein compare
Dsui_3496 +0.5 1.9 sulfite oxidase-like oxidoreductase compare
Dsui_0733 +0.5 1.9 hypothetical protein compare
Dsui_2797 +0.4 2.9 LysM repeat-containing protein compare
Dsui_1542 +0.4 1.8 small-conductance mechanosensitive channel compare
Dsui_2959 +0.4 1.7 precorrin-4 C11-methyltransferase compare
Dsui_0870 +0.4 2.2 putative membrane protein compare
Dsui_2870 +0.4 0.9 putative permease compare
Dsui_2765 +0.4 1.6 putative membrane protein compare
Dsui_2394 +0.4 2.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3450 +0.4 3.4 acetyl-CoA hydrolase compare
Dsui_0020 +0.4 2.1 HAD-superfamily subfamily IIA hydrolase, TIGR01458 compare
Dsui_0621 +0.4 1.0 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1869 +0.4 1.3 hypothetical protein compare
Dsui_2360 +0.4 1.9 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_0734 +0.4 1.5 acetyltransferase compare
Dsui_0394 +0.4 1.9 sugar kinase, ribokinase compare
Dsui_3112 +0.4 2.5 hypothetical protein compare
Dsui_1996 +0.4 3.0 PhoH family protein compare
Dsui_2971 +0.4 1.8 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_3107 +0.4 2.7 Zn-dependent hydrolase, glyoxylase compare
Dsui_2658 +0.4 3.1 hypothetical protein compare
Dsui_2378 +0.4 0.6 hypothetical protein compare
Dsui_1197 +0.4 1.6 putative Mg2+ and Co2+ transporter CorC compare
Dsui_0128 +0.4 3.1 D-alanyl-D-alanine carboxypeptidase compare
Dsui_2652 +0.4 1.8 hydrolase, TatD family compare
Dsui_2961 +0.4 1.0 precorrin isomerase compare
Dsui_2186 +0.4 1.6 Protein of unknown function (DUF3567) compare
Dsui_1003 +0.4 2.4 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_2921 +0.4 0.9 isochorismate synthase family protein compare
Dsui_3440 +0.4 1.2 Protein of unknown function (DUF2892) compare
Dsui_2131 +0.4 2.6 tRNA-Arg compare
Dsui_0034 +0.4 2.2 flagellar capping protein compare
Dsui_2751 +0.4 3.4 cyanophycin synthetase compare
Dsui_3308 +0.4 2.2 cytochrome c553 compare
Dsui_3345 +0.4 2.2 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_1663 +0.4 1.7 ABC-type Co2+ transport system, periplasmic component compare
Dsui_3288 +0.4 1.9 anti-anti-sigma factor compare
Dsui_0864 +0.4 2.7 phosphate regulon sensor kinase PhoR compare
Dsui_1152 +0.4 2.1 Ni,Fe-hydrogenase I large subunit compare
Dsui_0382 +0.4 1.3 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0671 +0.4 1.8 arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase compare
Dsui_2352 +0.4 1.3 hypothetical protein compare
Dsui_2276 +0.4 1.6 Protein of unknown function (DUF2975) compare
Dsui_1707 +0.4 2.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1658 +0.4 1.3 uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Dsui_2052 +0.4 2.0 hypothetical protein compare
Dsui_2761 +0.4 1.1 hypothetical protein compare
Dsui_0690 +0.4 2.5 hypothetical protein compare
Dsui_0299 +0.4 1.7 acetyltransferase compare
Dsui_1303 +0.4 1.5 hypothetical protein compare
Dsui_2650 +0.4 2.6 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_2090 +0.4 0.9 transcriptional regulator compare
Dsui_3151 +0.4 0.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0429 +0.4 1.4 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_1521 +0.4 2.0 hypothetical protein compare
Dsui_1579 +0.4 2.2 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1700 +0.4 2.1 putative membrane protein compare
Dsui_3316 +0.4 1.7 Gram-negative bacterial tonB protein compare
Dsui_2541 +0.4 1.7 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1460 +0.4 2.4 cAMP-binding protein compare
Dsui_3309 +0.4 3.0 nitrous oxide reductase compare
Dsui_2181 +0.4 1.5 DNA-binding domain-containing protein, AraC-type compare
Dsui_3337 +0.4 2.8 hypothetical protein compare
Dsui_2319 +0.4 2.6 transcriptional regulator compare
Dsui_3001 +0.4 1.7 putative domain HDIG-containing protein compare
Dsui_0088 +0.4 1.8 tRNA-Ala compare
Dsui_3518 +0.4 2.1 putative membrane protein compare
Dsui_2656 +0.4 1.5 conserved hypothetical protein, YceG family compare


Specific Phenotypes

For 1 genes in this experiment

For anaerobic Sodium D,L-Lactate in Dechlorosoma suillum PS

For anaerobic Sodium D,L-Lactate across organisms