Experiment set2H32 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_3034 -4.8 -24.7 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_1581 -4.7 -4.5 response regulator compare
Dsui_1176 -4.4 -9.9 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_1576 -4.3 -2.9 dihydrolipoamide dehydrogenase compare
Dsui_1460 -4.2 -9.7 cAMP-binding protein compare
Dsui_1647 -4.1 -10.6 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_1177 -4.1 -8.6 Ethylbenzene dehydrogenase compare
Dsui_1827 -4.0 -2.7 hypothetical protein compare
Dsui_1445 -3.6 -4.3 succinyl-CoA synthetase, beta subunit compare
Dsui_1978 -3.5 -2.4 putative lipoprotein compare
Dsui_1577 -3.4 -2.3 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1970 -3.2 -5.3 metalloendopeptidase-like membrane protein compare
Dsui_1578 -3.1 -5.1 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_2189 -3.0 -4.1 acyl-CoA synthetase (NDP forming) compare
Dsui_3484 -3.0 -2.0 putative permease compare
Dsui_2368 -2.9 -3.5 serine O-acetyltransferase compare
Dsui_3110 -2.7 -7.3 nitric oxide reductase large subunit compare
Dsui_0675 -2.6 -3.0 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_0745 -2.5 -2.4 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_0004 -2.5 -6.8 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_3139 -2.4 -4.3 outer membrane assembly lipoprotein YfgL compare
Dsui_2717 -2.4 -4.2 RNA polymerase-binding protein DksA compare
Dsui_1446 -2.4 -3.9 succinyl-CoA synthetase, alpha subunit compare
Dsui_3102 -2.3 -3.1 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0469 -2.3 -2.6 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_0099 -2.1 -2.6 putative periplasmic or secreted lipoprotein compare
Dsui_1969 -2.0 -6.4 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_0499 -1.9 -2.8 DNA-directed RNA polymerase, omega subunit compare
Dsui_3393 -1.9 -3.7 Kef-type K+ transport system, membrane component compare
Dsui_3109 -1.9 -5.2 cytochrome c, mono- and diheme variants family compare
Dsui_0258 -1.9 -5.0 sulfate ABC transporter, ATP-binding protein compare
Dsui_0650 -1.9 -3.8 hypothetical protein compare
Dsui_3220 -1.8 -2.1 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_3352 -1.8 -2.9 cAMP-binding protein compare
Dsui_2153 -1.8 -7.2 molybdopterin converting factor, subunit 1 compare
Dsui_0465 -1.7 -2.7 ADP-heptose:LPS heptosyltransferase compare
Dsui_2154 -1.7 -4.6 molybdopterin converting factor, large subunit compare
Dsui_3467 -1.7 -2.5 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_3240 -1.7 -6.3 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_1321 -1.7 -5.9 ABC-type uncharacterized transport system, permease component compare
Dsui_2402 -1.7 -1.5 hypothetical protein compare
Dsui_2152 -1.7 -3.7 molybdenum cofactor synthesis domain protein compare
Dsui_3054 -1.7 -2.4 phosphate ABC transporter, permease protein PstA compare
Dsui_0871 -1.7 -2.0 hypothetical protein compare
Dsui_3457 -1.6 -1.4 K+ transporter compare
Dsui_0510 -1.6 -5.4 ferredoxin-type protein, NapH/MauN family compare
Dsui_1932 -1.6 -4.2 transcriptional regulator compare
Dsui_0255 -1.6 -1.5 hypothetical protein compare
Dsui_0007 -1.6 -1.2 cold shock protein compare
Dsui_2767 -1.6 -3.1 glutaredoxin-like protein compare
Dsui_0508 -1.6 -10.1 periplasmic nitrate reductase, large subunit compare
Dsui_0399 -1.6 -2.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_1084 -1.6 -9.0 bacteriophage protein gp37 compare
Dsui_2126 -1.6 -1.7 alanine dehydrogenase compare
Dsui_0260 -1.6 -5.9 sulfate ABC transporter, permease protein CysT compare
Dsui_0992 -1.5 -2.3 putative membrane protein compare
Dsui_2560 -1.5 -2.8 zonula occludens toxin compare
Dsui_0507 -1.5 -3.5 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_3300 -1.5 -9.7 ABC-2 type transporter compare
Dsui_3523 -1.4 -3.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1930 -1.4 -6.3 transcriptional regulator compare
Dsui_2816 -1.4 -3.1 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3414 -1.4 -6.3 FAD/FMN-dependent dehydrogenase compare
Dsui_1640 -1.4 -2.9 hypothetical protein compare
Dsui_2151 -1.4 -2.0 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_0964 -1.4 -4.8 putative lipid carrier protein compare
Dsui_0259 -1.4 -4.7 sulfate ABC transporter, permease protein CysW compare
Dsui_0509 -1.3 -5.3 MauM/NapG family ferredoxin-type protein compare
Dsui_2086 -1.3 -1.9 cytochrome c compare
Dsui_1947 -1.3 -1.5 nucleotide sugar dehydrogenase compare
Dsui_2687 -1.3 -5.8 RIP metalloprotease RseP compare
Dsui_3081 -1.3 -1.5 chaperone protein DnaK compare
Dsui_3299 -1.3 -7.3 Peroxiredoxin compare
Dsui_3301 -1.3 -5.6 NosL compare
Dsui_1235 -1.3 -1.4 hypothetical protein compare
Dsui_1642 -1.3 -5.8 hypothetical protein compare
Dsui_3375 -1.3 -1.1 hypothetical protein compare
Dsui_3305 -1.3 -7.8 parallel beta-helix repeat (two copies) compare
Dsui_1968 -1.2 -5.9 5''/3''-nucleotidase SurE compare
Dsui_3302 -1.2 -6.8 ABC-type multidrug transport system, ATPase component compare
Dsui_1641 -1.2 -4.0 SirA-like protein compare
Dsui_0999 -1.2 -2.5 MoxR-like ATPase compare
Dsui_0837 -1.2 -3.1 tRNA modification GTPase TrmE compare
Dsui_1584 -1.2 -4.9 hypothetical protein compare
Dsui_1096 -1.2 -6.9 glutamate synthase family protein compare
Dsui_1540 -1.2 -3.8 NAD(FAD)-dependent dehydrogenase compare
Dsui_1094 -1.2 -2.1 shikimate kinase compare
Dsui_2563 -1.1 -2.6 hypothetical protein compare
Dsui_1170 -1.1 -1.0 heme exporter protein CcmD compare
Dsui_0990 -1.1 -0.8 putative P-loop-containing kinase compare
Dsui_0401 -1.1 -1.8 nucleoside-diphosphate-sugar epimerase compare
Dsui_1400 -1.1 -4.0 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_3120 -1.1 -2.5 cAMP-binding protein compare
Dsui_0520 -1.1 -6.6 transcriptional regulator compare
Dsui_3520 -1.1 -8.3 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0252 -1.1 -1.9 TIGR00252 family protein compare
Dsui_1097 -1.1 -2.9 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_2752 -1.1 -1.9 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_1236 -1.1 -5.2 molybdenum cofactor synthesis domain protein compare
Dsui_1221 -1.1 -3.3 hypothetical protein compare
Dsui_2457 -1.1 -4.5 GTP-binding protein LepA compare
Dsui_3392 -1.1 -4.7 carboxylate-amine ligase, YbdK family compare
Dsui_2275 -1.1 -3.0 putative transcriptional regulator compare
Dsui_3524 -1.1 -2.7 signal transduction histidine kinase compare
Dsui_3306 -1.1 -7.0 hypothetical protein compare
Dsui_0174 -1.1 -1.2 hypothetical protein compare
Dsui_3521 -1.1 -4.3 membrane-fusion protein compare
Dsui_2567 -1.1 -7.9 hypothetical protein compare
Dsui_1398 -1.0 -2.2 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_3318 -1.0 -5.7 cytochrome c, mono- and diheme variants family compare
Dsui_2443 -1.0 -1.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_2433 -1.0 -4.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_3522 -1.0 -2.8 outer membrane protein compare
Dsui_1929 -1.0 -3.6 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_1525 -1.0 -5.6 sulfate/thiosulfate-binding protein compare
Dsui_0751 -1.0 -5.1 Eco57I restriction endonuclease compare
Dsui_2503 -1.0 -2.0 Mu transposase/integrase compare
Dsui_2673 -1.0 -2.3 hypothetical protein compare
Dsui_1377 -1.0 -2.3 phasin family protein compare
Dsui_1442 -1.0 -1.7 putative efflux protein, MATE family compare
Dsui_1928 -1.0 -2.6 cytochrome c, mono- and diheme variants family compare
Dsui_3080 -0.9 -1.1 molecular chaperone GrpE (heat shock protein) compare
Dsui_2651 -0.9 -1.4 ankyrin repeat-containing protein compare
Dsui_1198 -0.9 -3.9 apolipoprotein N-acyltransferase compare
Dsui_0393 -0.9 -1.9 glycosyltransferase compare
Dsui_3377 -0.9 -1.8 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2289 -0.9 -2.7 qaraquat-inducible protein B compare
Dsui_2158 -0.9 -1.8 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1402 -0.9 -1.6 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_3532 -0.9 -3.1 Protein of unknown function (DUF3106) compare
Dsui_0608 -0.9 -3.3 nucleoside-diphosphate-sugar epimerase compare
Dsui_1582 -0.9 -4.4 Fe-S oxidoreductase compare
Dsui_3455 -0.9 -3.5 HD-GYP domain-containing protein compare
Dsui_0747 -0.9 -2.3 glutamate--cysteine ligase compare
Dsui_1370 -0.9 -2.7 putative permease, DMT superfamily compare
Dsui_3319 -0.9 -3.2 uroporphyrin-III C-methyltransferase compare
Dsui_1687 -0.9 -2.4 nitrogen regulatory protein PII compare
Dsui_0740 -0.9 -4.2 methionine biosynthesis protein MetW compare
Dsui_0901 -0.9 -2.3 hypothetical protein compare
Dsui_2306 -0.9 -1.7 transcriptional regulator compare
Dsui_2694 -0.9 -1.7 ribosomal protein S2 compare
Dsui_1399 -0.9 -3.3 conserved hypothetical integral membrane protein compare
Dsui_1041 -0.9 -3.3 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase compare
Dsui_2781 -0.9 -1.9 PAS domain S-box compare
Dsui_0963 -0.9 -3.1 collagenase-like protease compare
Dsui_3415 -0.9 -4.6 FAD/FMN-dependent dehydrogenase compare
Dsui_0679 -0.8 -3.5 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_2098 -0.8 -0.8 hypothetical protein compare
Dsui_3096 -0.8 -2.4 NADH dehydrogenase, FAD-containing subunit compare
Dsui_3253 -0.8 -3.2 Protein of unknown function (DUF3579) compare
Dsui_3118 -0.8 -2.0 polyferredoxin compare
Dsui_0569 -0.8 -1.7 hypothetical protein compare
Dsui_1541 -0.8 -3.4 cytochrome c553 compare
Dsui_0414 -0.8 -2.0 oligopeptide/dipeptide ABC transporter, ATP-binding protein compare
Dsui_0860 -0.8 -2.0 hypothetical protein compare
Dsui_1583 -0.8 -5.6 (4Fe-4S) cluster-containing protein compare
Dsui_2025 -0.8 -2.2 RND family efflux transporter, MFP subunit compare
Dsui_1248 -0.8 -1.0 protein containing C-terminal region/beta chain of methionyl-tRNA synthetase compare
Dsui_1796 -0.8 -4.9 phage/plasmid-related protein TIGR03299 compare
Dsui_0454 -0.8 -1.1 hypothetical protein compare
Dsui_3169 -0.8 -2.4 putative metal-binding protein compare
Dsui_0192 -0.8 -1.9 hypothetical protein compare
Dsui_3443 -0.8 -2.1 RND family efflux transporter, MFP subunit compare
Dsui_0962 -0.8 -5.3 collagenase-like protease compare
Dsui_3304 -0.8 -4.4 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_2549 -0.7 -3.4 hypothetical protein compare
Dsui_0477 -0.7 -1.8 tol-pal system protein YbgF compare
Dsui_1931 -0.7 -3.5 transcriptional regulator compare
Dsui_2666 -0.7 -1.8 putative transcriptional regulator compare
Dsui_2956 -0.7 -1.0 ABC-type cobalt transport system, periplasmic component compare
Dsui_2197 -0.7 -5.2 endopeptidase Clp ATP-binding regulatory subunit ClpX compare
Dsui_2902 -0.7 -0.9 hypothetical protein compare
Dsui_3126 -0.7 -3.3 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3207 -0.7 -0.8 ankyrin repeat-containing protein compare
Dsui_2085 -0.7 -1.8 NADPH-dependent FMN reductase compare
Dsui_2259 -0.7 -0.9 hypothetical protein compare
Dsui_3495 -0.7 -0.9 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_1055 -0.7 -1.7 sporulation related protein compare
Dsui_2884 -0.7 -1.8 dethiobiotin synthase compare
Dsui_2821 -0.7 -2.3 K+ transport system, NAD-binding component compare
Dsui_2454 -0.7 -2.3 Positive regulator of sigma E activity compare
Dsui_0086 -0.7 -4.3 nucleoside-diphosphate-sugar epimerase compare
Dsui_0176 -0.7 -2.2 ribosome modulation factor compare
Dsui_3303 -0.7 -4.6 ferredoxin-type protein, NapH/MauN family compare
Dsui_2341 -0.7 -2.4 ABC-type multidrug transport system, ATPase component compare
Dsui_1645 -0.7 -2.3 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1845 -0.7 -2.2 phosphate/sulfate permease compare
Dsui_2427 -0.7 -3.5 molybdenum cofactor biosynthesis protein A compare
Dsui_3349 -0.7 -1.4 hypothetical protein compare
Dsui_3032 -0.7 -3.9 phosphotransacetylase compare
Dsui_3072 -0.7 -1.8 DNA repair protein RecN compare
Dsui_1759 -0.7 -2.0 flagellar hook-basal body complex protein FliE compare
Dsui_3117 -0.7 -1.3 hypothetical protein compare
Dsui_0023 -0.7 -1.3 acetylornithine/succinylornithine aminotransferase compare
Dsui_3343 -0.7 -1.4 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_0193 -0.7 -3.2 putative phage protein, putative large terminase compare
Dsui_0005 -0.7 -2.9 putative secreted protein compare
Dsui_2745 -0.7 -1.3 methyl-accepting chemotaxis protein compare
Dsui_3307 -0.7 -3.9 cytochrome c553 compare
Dsui_0137 -0.7 -3.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms