Experiment set2H32 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2077 +1.3 6.3 cAMP-binding protein compare
Dsui_3130 +1.2 2.1 tRNA-Leu compare
Dsui_2756 +0.9 1.7 hypothetical protein compare
Dsui_2276 +0.8 2.5 Protein of unknown function (DUF2975) compare
Dsui_1534 +0.7 1.1 ribosomal protein L33 compare
Dsui_2315 +0.7 2.3 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_2873 +0.7 1.2 Peroxiredoxin compare
Dsui_1530 +0.7 1.2 hypothetical protein compare
Dsui_1590 +0.7 1.3 hypothetical protein compare
Dsui_2607 +0.6 2.0 hypothetical protein compare
Dsui_2424 +0.6 1.7 hypothetical protein compare
Dsui_3295 +0.6 2.6 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_0417 +0.6 1.9 gamma-glutamyltransferase compare
Dsui_3232 +0.6 1.5 activator of osmoprotectant transporter ProP compare
Dsui_0554 +0.6 1.8 uncharacterized conserved small protein containing a coiled-coil domain compare
Dsui_0418 +0.6 2.4 putative Na+-dependent transporter compare
Dsui_0456 +0.6 2.7 homoserine kinase, Neisseria type compare
Dsui_1955 +0.6 2.5 3'-5' exonuclease compare
Dsui_1251 +0.6 1.0 acylphosphatase compare
Dsui_2243 +0.6 2.2 hypothetical protein compare
Dsui_3458 +0.6 1.6 septum site-determining protein MinC compare
Dsui_3194 +0.6 2.4 pseudouridylate synthase I compare
Dsui_2199 +0.5 1.1 bacterial nucleoid DNA-binding protein compare
Dsui_0184 +0.5 1.1 putative transcriptional regulator compare
Dsui_2198 +0.5 2.6 ATP-dependent protease La compare
Dsui_3206 +0.5 1.4 putative metal-binding protein compare
Dsui_3154 +0.5 2.3 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2191 +0.5 1.3 squalene-associated FAD-dependent desaturase compare
Dsui_2076 +0.5 1.7 cytochrome c, mono- and diheme variants family compare
Dsui_2911 +0.5 1.4 cation/cationic drug transporter compare
Dsui_3133 +0.5 0.9 hypothetical protein compare
Dsui_0018 +0.5 2.3 putative permease compare
Dsui_0637 +0.5 3.6 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_1819 +0.5 1.8 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1711 +0.5 3.2 methylase of chemotaxis methyl-accepting protein compare
Dsui_1297 +0.5 1.7 biotin synthetase compare
Dsui_2935 +0.5 1.4 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1451 +0.5 1.7 FHA domain-containing protein compare
Dsui_0014 +0.5 2.5 putative membrane protein compare
Dsui_2407 +0.5 1.3 beta-propeller domain-containing protein, methanol dehydrogenase compare
Dsui_2004 +0.5 2.7 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_0327 +0.5 1.9 transcriptional regulator compare
Dsui_2230 +0.5 1.6 conserved hypothetical integral membrane protein compare
Dsui_0685 +0.5 0.6 glutathione S-transferase compare
Dsui_1367 +0.5 2.8 crcB protein compare
Dsui_2927 +0.5 1.0 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_2539 +0.5 1.3 polyhydroxyalkanoate synthesis repressor PhaR compare
Dsui_2103 +0.5 3.0 hypothetical protein compare
Dsui_1443 +0.5 1.6 phenylacetate-CoA ligase compare
Dsui_2802 +0.5 2.1 flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family compare
Dsui_2476 +0.5 1.0 hypothetical protein compare
Dsui_2606 +0.5 1.5 soluble lytic murein transglycosylase-like protein compare
Dsui_2977 +0.5 1.7 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1233 +0.5 2.9 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Dsui_2032 +0.5 1.0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1588 +0.4 2.4 aminoglycoside phosphotransferase compare
Dsui_2809 +0.4 1.0 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0131 +0.4 3.8 phosphoenolpyruvate carboxykinase (GTP) compare
Dsui_3351 +0.4 1.0 cytochrome c peroxidase compare
Dsui_0613 +0.4 0.7 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_3099 +0.4 1.1 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_2959 +0.4 1.4 precorrin-4 C11-methyltransferase compare
Dsui_1658 +0.4 1.6 uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Dsui_2533 +0.4 0.8 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_0106 +0.4 1.6 hypothetical protein compare
Dsui_2007 +0.4 1.0 putative solute:sodium symporter small subunit compare
Dsui_0301 +0.4 0.8 histidine kinase compare
Dsui_1262 +0.4 3.2 TRAP transporter, DctM subunit compare
Dsui_2045 +0.4 1.4 hypothetical protein compare
Dsui_2600 +0.4 1.2 hypothetical protein compare
Dsui_2582 +0.4 2.5 hypothetical protein compare
Dsui_2046 +0.4 1.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3105 +0.4 2.9 CBS domain-containing protein compare
Dsui_1663 +0.4 1.7 ABC-type Co2+ transport system, periplasmic component compare
Dsui_3016 +0.4 1.5 hypothetical protein compare
Dsui_2634 +0.4 2.8 cytochrome c, mono- and diheme variants family compare
Dsui_1714 +0.4 1.8 anti-anti-sigma factor compare
Dsui_0996 +0.4 1.4 soluble lytic murein transglycosylase-like protein compare
Dsui_2378 +0.4 0.8 hypothetical protein compare
Dsui_2612 +0.4 1.7 hypothetical protein compare
Dsui_0691 +0.4 1.4 hypothetical protein compare
Dsui_3171 +0.4 0.8 putative protein-disulfide isomerase compare
Dsui_3107 +0.4 2.3 Zn-dependent hydrolase, glyoxylase compare
Dsui_1877 +0.4 1.4 NADH:flavin oxidoreductase compare
Dsui_2398 +0.4 1.2 hypothetical protein compare
Dsui_2359 +0.4 1.0 hypothetical protein compare
Dsui_2268 +0.4 1.0 putative lactoylglutathione lyase compare
Dsui_0573 +0.4 1.0 ferredoxin-like protein compare
Dsui_3006 +0.4 1.1 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_2369 +0.4 1.5 iron-sulfur cluster assembly transcription factor IscR compare
Dsui_2706 +0.4 1.0 adenine phosphoribosyltransferase compare
Dsui_2297 +0.4 1.6 acetoacetyl-CoA synthase compare
Dsui_0088 +0.4 2.2 tRNA-Ala compare
Dsui_3333 +0.4 1.9 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2430 +0.4 1.2 tRNA-Asn compare
Dsui_1664 +0.4 1.3 putative periplasmic protein compare
Dsui_3285 +0.4 2.7 histidine kinase,HAMP domain-containing protein,histidine kinase compare
Dsui_0289 +0.4 1.1 putative membrane protein compare
Dsui_2349 +0.4 1.7 Zn-dependent hydrolase, glyoxylase compare
Dsui_1206 +0.4 1.6 hypothetical protein compare
Dsui_0658 +0.4 0.8 chemotaxis signal transduction protein compare
Dsui_0606 +0.4 1.4 putative N6-adenine-specific DNA methylase compare
Dsui_2775 +0.4 1.3 hypothetical protein compare
Dsui_3332 +0.4 1.7 glutathione S-transferase compare
Dsui_2924 +0.4 1.1 hypothetical protein compare
Dsui_0493 +0.4 1.5 hypothetical protein compare
Dsui_0653 +0.3 2.1 putative SAM-dependent methyltransferase compare
Dsui_2888 +0.3 1.7 stress-induced morphogen compare
Dsui_0574 +0.3 2.2 flavin-dependent dehydrogenase compare
Dsui_0978 +0.3 1.2 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_3209 +0.3 1.0 putative esterase of the alpha/beta hydrolase fold protein compare
Dsui_0380 +0.3 1.7 hypothetical protein compare
Dsui_0299 +0.3 1.3 acetyltransferase compare
Dsui_2220 +0.3 0.7 hypothetical protein compare
Dsui_1505 +0.3 1.3 phage-related lysozyme (muraminidase) compare
Dsui_0188 +0.3 1.7 hypothetical protein compare
Dsui_0737 +0.3 1.1 hypothetical protein compare
Dsui_2995 +0.3 0.6 hypothetical protein compare
Dsui_3315 +0.3 1.6 biopolymer transport protein compare
Dsui_1242 +0.3 1.5 hypothetical protein compare
Dsui_2060 +0.3 0.9 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_2921 +0.3 0.9 isochorismate synthase family protein compare
Dsui_2438 +0.3 1.8 haloacid dehalogenase superfamily enzyme, subfamily IA compare
Dsui_3388 +0.3 2.2 hypothetical protein compare
Dsui_0654 +0.3 1.9 hypothetical protein compare
Dsui_0638 +0.3 2.2 ABC-type polar amino acid transport system, ATPase component compare
Dsui_0695 +0.3 2.2 putative ATPase of the PP-loop superfamily implicated in cell cycle control compare
Dsui_0550 +0.3 1.8 nitrogenase molybdenum-iron cofactor biosynthesis protein NifE compare
Dsui_2484 +0.3 1.1 hydroxyacylglutathione hydrolase compare
Dsui_3111 +0.3 1.8 hypothetical protein compare
Dsui_1703 +0.3 2.0 ADP-ribose pyrophosphatase compare
Dsui_3456 +0.3 1.3 hypothetical protein compare
Dsui_0210 +0.3 1.4 hypothetical protein compare
Dsui_1832 +0.3 1.2 nitrate ABC transporter, permease protein compare
Dsui_1707 +0.3 2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3278 +0.3 1.8 molybdenum cofactor biosynthesis protein A compare
Dsui_2492 +0.3 1.0 site-specific recombinase, DNA invertase Pin compare
Dsui_0636 +0.3 2.4 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Dsui_1890 +0.3 1.4 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2367 +0.3 2.0 RNA methyltransferase, TrmH family, group 1 compare
Dsui_1005 +0.3 1.0 tRNA-Gly compare
Dsui_1911 +0.3 1.4 ParB-like partition protein compare
Dsui_2976 +0.3 1.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_3411 +0.3 1.7 hypothetical protein compare
Dsui_3151 +0.3 0.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2342 +0.3 0.9 multidrug resistance efflux pump compare
Dsui_3463 +0.3 1.4 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component compare
Dsui_1868 +0.3 1.8 HD-GYP domain-containing protein compare
Dsui_3260 +0.3 2.4 vacuolar-type H(+)-translocating pyrophosphatase compare
Dsui_0330 +0.3 2.4 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_1923 +0.3 2.1 ribonucleotide reductase, beta subunit compare
Dsui_1646 +0.3 1.0 cAMP-binding protein compare
Dsui_1351 +0.3 1.3 DNA/RNA helicase, superfamily II compare
Dsui_1537 +0.3 0.6 DNA repair protein radc compare
Dsui_0406 +0.3 1.0 Rhodanese-related sulfurtransferase compare
Dsui_2069 +0.3 1.8 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2123 +0.3 0.6 EAL domain-containing protein compare
Dsui_0578 +0.3 2.0 homocitrate synthase NifV compare
Dsui_3205 +0.3 1.7 pseudouridine synthase, RluA family compare
Dsui_3144 +0.3 1.4 type IV pilus biogenesis/stability protein PilW compare
Dsui_3026 +0.3 0.8 hydrogenase maturation protease compare
Dsui_1037 +0.3 0.4 ribosomal protein L25, Ctc-form compare
Dsui_1151 +0.3 1.7 transcriptional regulator compare
Dsui_0863 +0.3 1.7 phosphate regulon transcriptional regulatory protein PhoB compare
Dsui_3402 +0.3 0.8 putative amidohydrolase compare
Dsui_2131 +0.3 1.9 tRNA-Arg compare
Dsui_3361 +0.3 0.8 hypothetical protein compare
Dsui_3112 +0.3 1.9 hypothetical protein compare
Dsui_1704 +0.3 1.5 flagellar motor stator protein MotA compare
Dsui_3007 +0.3 0.6 hydrogenase assembly chaperone HypC/HupF compare
Dsui_3527 +0.3 0.9 ketol-acid reductoisomerase compare
Dsui_1745 +0.3 1.1 flagellar biosynthetic protein FliQ compare
Dsui_2913 +0.3 1.1 dihydroxynaphthoate synthase compare
Dsui_3482 +0.3 1.6 Na+/H+ dicarboxylate symporter compare
Dsui_0635 +0.3 2.0 periplasmic component of amino acid ABC-type transporter/signal transduction system compare
Dsui_0651 +0.3 0.8 tyrosine recombinase XerC compare
Dsui_2235 +0.3 1.2 hypothetical protein compare
Dsui_1526 +0.3 1.9 hypothetical protein compare
Dsui_3289 +0.3 1.6 hypothetical protein compare
Dsui_3023 +0.3 1.8 phosphate/sulfate permease compare
Dsui_3496 +0.3 1.7 sulfite oxidase-like oxidoreductase compare
Dsui_1266 +0.3 0.5 transcriptional regulator NrdR compare
Dsui_0577 +0.3 0.8 Nitrogen fixation protein NifW compare
Dsui_0051 +0.3 1.5 cob(II)yrinic acid a,c-diamide reductase compare
Dsui_2955 +0.3 1.3 cobalamin biosynthesis protein CbiM compare
Dsui_0872 +0.3 1.9 exodeoxyribonuclease III compare
Dsui_1362 +0.3 1.5 protein of unknown function (DUF1987) compare
Dsui_0008 +0.3 2.1 hypothetical protein compare
Dsui_1234 +0.3 1.9 putative Zn-dependent protease-like protein compare
Dsui_0681 +0.3 1.4 ABC-type Fe3+-hydroxamate transport system, periplasmic component compare
Dsui_2566 +0.3 2.7 hypothetical protein compare
Dsui_2141 +0.3 1.0 flagellar motor protein compare
Dsui_2581 +0.3 2.4 putative HD superfamily hydrolase compare
Dsui_0582 +0.3 1.1 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Dsui_1777 +0.3 1.4 uncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein compare
Dsui_2260 +0.3 0.6 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_1775 +0.3 2.4 type I secretion membrane fusion protein, HlyD family compare
Dsui_3329 +0.3 1.3 hypothetical protein compare
Dsui_0494 +0.3 1.4 ribonuclease PH compare
Dsui_0589 +0.3 1.2 putative GTPase, G3E family compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms