Experiment set2H31 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1460 -5.4 -10.3 cAMP-binding protein compare
Dsui_3034 -4.9 -27.2 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_1176 -4.7 -10.4 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_1177 -4.1 -12.3 Ethylbenzene dehydrogenase compare
Dsui_2189 -3.9 -3.8 acyl-CoA synthetase (NDP forming) compare
Dsui_1581 -3.9 -3.7 response regulator compare
Dsui_1647 -3.9 -9.5 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_1978 -3.8 -2.6 putative lipoprotein compare
Dsui_3220 -3.8 -2.6 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_3081 -3.8 -2.5 chaperone protein DnaK compare
Dsui_1170 -3.7 -1.9 heme exporter protein CcmD compare
Dsui_1970 -3.6 -5.4 metalloendopeptidase-like membrane protein compare
Dsui_0745 -3.4 -2.3 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_2368 -3.0 -3.8 serine O-acetyltransferase compare
Dsui_1577 -2.9 -2.7 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0675 -2.8 -3.7 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_0099 -2.7 -3.3 putative periplasmic or secreted lipoprotein compare
Dsui_0401 -2.7 -3.1 nucleoside-diphosphate-sugar epimerase compare
Dsui_1445 -2.4 -4.6 succinyl-CoA synthetase, beta subunit compare
Dsui_2673 -2.4 -3.7 hypothetical protein compare
Dsui_1827 -2.4 -2.2 hypothetical protein compare
Dsui_3139 -2.4 -4.9 outer membrane assembly lipoprotein YfgL compare
Dsui_1578 -2.3 -5.7 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3207 -2.3 -1.9 ankyrin repeat-containing protein compare
Dsui_3110 -2.3 -7.4 nitric oxide reductase large subunit compare
Dsui_1969 -2.3 -7.9 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_3102 -2.2 -2.6 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_2717 -2.2 -4.5 RNA polymerase-binding protein DksA compare
Dsui_3240 -2.1 -8.7 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0507 -2.0 -4.5 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_1446 -2.0 -3.7 succinyl-CoA synthetase, alpha subunit compare
Dsui_3080 -2.0 -2.0 molecular chaperone GrpE (heat shock protein) compare
Dsui_3109 -1.9 -5.2 cytochrome c, mono- and diheme variants family compare
Dsui_0685 -1.9 -3.0 glutathione S-transferase compare
Dsui_1576 -1.9 -2.2 dihydrolipoamide dehydrogenase compare
Dsui_2981 -1.9 -1.2 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_0004 -1.8 -6.3 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_0259 -1.8 -4.1 sulfate ABC transporter, permease protein CysW compare
Dsui_0508 -1.7 -12.3 periplasmic nitrate reductase, large subunit compare
Dsui_2151 -1.7 -4.0 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_1084 -1.7 -9.5 bacteriophage protein gp37 compare
Dsui_2154 -1.7 -3.2 molybdopterin converting factor, large subunit compare
Dsui_3054 -1.7 -2.7 phosphate ABC transporter, permease protein PstA compare
Dsui_1321 -1.7 -7.6 ABC-type uncharacterized transport system, permease component compare
Dsui_2560 -1.7 -3.3 zonula occludens toxin compare
Dsui_2153 -1.7 -8.5 molybdopterin converting factor, subunit 1 compare
Dsui_2295 -1.6 -2.4 transcriptional regulator compare
Dsui_0465 -1.6 -3.3 ADP-heptose:LPS heptosyltransferase compare
Dsui_0650 -1.6 -3.9 hypothetical protein compare
Dsui_2816 -1.6 -3.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0964 -1.5 -5.7 putative lipid carrier protein compare
Dsui_0255 -1.5 -1.7 hypothetical protein compare
Dsui_2286 -1.5 -2.7 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2152 -1.4 -4.0 molybdenum cofactor synthesis domain protein compare
Dsui_2466 -1.4 -2.6 ATP dependent DNA ligase-like protein compare
Dsui_3299 -1.4 -8.5 Peroxiredoxin compare
Dsui_1399 -1.4 -6.1 conserved hypothetical integral membrane protein compare
Dsui_2687 -1.4 -6.7 RIP metalloprotease RseP compare
Dsui_0260 -1.4 -5.3 sulfate ABC transporter, permease protein CysT compare
Dsui_3305 -1.4 -8.3 parallel beta-helix repeat (two copies) compare
Dsui_1393 -1.4 -3.0 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0608 -1.4 -4.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_3169 -1.4 -3.8 putative metal-binding protein compare
Dsui_3414 -1.4 -6.1 FAD/FMN-dependent dehydrogenase compare
Dsui_2902 -1.3 -1.6 hypothetical protein compare
Dsui_1640 -1.3 -3.1 hypothetical protein compare
Dsui_1968 -1.3 -6.3 5''/3''-nucleotidase SurE compare
Dsui_1642 -1.3 -6.0 hypothetical protein compare
Dsui_1403 -1.3 -2.6 putative NTP binding protein (contains STAS domain) compare
Dsui_3300 -1.3 -8.5 ABC-2 type transporter compare
Dsui_3301 -1.3 -5.9 NosL compare
Dsui_2563 -1.2 -2.7 hypothetical protein compare
Dsui_1947 -1.2 -1.3 nucleotide sugar dehydrogenase compare
Dsui_1670 -1.2 -2.3 cytochrome c peroxidase compare
Dsui_0992 -1.2 -2.0 putative membrane protein compare
Dsui_0509 -1.2 -5.2 MauM/NapG family ferredoxin-type protein compare
Dsui_0500 -1.2 -3.4 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1402 -1.1 -3.7 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2567 -1.1 -8.0 hypothetical protein compare
Dsui_1096 -1.1 -7.5 glutamate synthase family protein compare
Dsui_3521 -1.1 -4.0 membrane-fusion protein compare
Dsui_3392 -1.1 -5.2 carboxylate-amine ligase, YbdK family compare
Dsui_2433 -1.1 -5.7 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_3150 -1.1 -2.9 electron transfer flavoprotein, beta subunit compare
Dsui_0258 -1.1 -4.1 sulfate ABC transporter, ATP-binding protein compare
Dsui_0460 -1.1 -2.6 ADP-heptose:LPS heptosyltransferase compare
Dsui_3302 -1.1 -4.8 ABC-type multidrug transport system, ATPase component compare
Dsui_3523 -1.1 -2.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1236 -1.1 -6.2 molybdenum cofactor synthesis domain protein compare
Dsui_2767 -1.0 -2.0 glutaredoxin-like protein compare
Dsui_2034 -1.0 -2.3 DNA gyrase inhibitor compare
Dsui_0007 -1.0 -1.3 cold shock protein compare
Dsui_2086 -1.0 -2.1 cytochrome c compare
Dsui_3415 -1.0 -5.3 FAD/FMN-dependent dehydrogenase compare
Dsui_1525 -1.0 -6.0 sulfate/thiosulfate-binding protein compare
Dsui_0811 -1.0 -4.5 hypothetical protein compare
Dsui_2180 -1.0 -1.6 hypothetical protein compare
Dsui_3393 -1.0 -3.6 Kef-type K+ transport system, membrane component compare
Dsui_1398 -1.0 -4.4 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1377 -1.0 -3.6 phasin family protein compare
Dsui_2259 -1.0 -2.1 hypothetical protein compare
Dsui_0520 -1.0 -7.5 transcriptional regulator compare
Dsui_1929 -1.0 -4.0 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_1641 -1.0 -3.7 SirA-like protein compare
Dsui_2501 -1.0 -2.5 TniQ protein compare
Dsui_0614 -1.0 -2.0 hypothetical protein compare
Dsui_0452 -1.0 -1.9 iojap-like ribosome-associated protein compare
Dsui_3520 -1.0 -7.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_2651 -1.0 -1.7 ankyrin repeat-containing protein compare
Dsui_3126 -1.0 -4.3 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3524 -0.9 -3.5 signal transduction histidine kinase compare
Dsui_1325 -0.9 -2.4 ADP-ribose pyrophosphatase compare
Dsui_1928 -0.9 -3.0 cytochrome c, mono- and diheme variants family compare
Dsui_2745 -0.9 -1.9 methyl-accepting chemotaxis protein compare
Dsui_1930 -0.9 -4.2 transcriptional regulator compare
Dsui_0613 -0.9 -1.1 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_3522 -0.9 -3.4 outer membrane protein compare
Dsui_3096 -0.9 -2.7 NADH dehydrogenase, FAD-containing subunit compare
Dsui_1392 -0.9 -2.7 type II secretory pathway, component PulF compare
Dsui_0962 -0.8 -5.9 collagenase-like protease compare
Dsui_0176 -0.8 -1.9 ribosome modulation factor compare
Dsui_3306 -0.8 -5.2 hypothetical protein compare
Dsui_2694 -0.8 -1.9 ribosomal protein S2 compare
Dsui_2668 -0.8 -2.3 putative phosphatase compare
Dsui_3304 -0.8 -5.9 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_3318 -0.8 -5.2 cytochrome c, mono- and diheme variants family compare
Dsui_1221 -0.8 -2.9 hypothetical protein compare
Dsui_0740 -0.8 -4.6 methionine biosynthesis protein MetW compare
Dsui_3120 -0.8 -2.2 cAMP-binding protein compare
Dsui_3303 -0.8 -5.5 ferredoxin-type protein, NapH/MauN family compare
Dsui_1931 -0.8 -2.9 transcriptional regulator compare
Dsui_2948 -0.8 -1.5 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0706 -0.8 -1.2 hypothetical protein compare
Dsui_2224 -0.8 -2.0 hypothetical protein compare
Dsui_2604 -0.8 -2.4 hypothetical protein compare
Dsui_2306 -0.8 -2.2 transcriptional regulator compare
Dsui_1541 -0.8 -2.7 cytochrome c553 compare
Dsui_3117 -0.8 -2.2 hypothetical protein compare
Dsui_2908 -0.8 -2.9 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0747 -0.8 -2.3 glutamate--cysteine ligase compare
Dsui_2562 -0.8 -1.3 hypothetical protein compare
Dsui_2457 -0.8 -3.7 GTP-binding protein LepA compare
Dsui_3416 -0.8 -0.9 transcriptional regulator compare
Dsui_0510 -0.8 -3.0 ferredoxin-type protein, NapH/MauN family compare
Dsui_2549 -0.8 -3.7 hypothetical protein compare
Dsui_1097 -0.7 -2.0 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_0810 -0.7 -3.1 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_0751 -0.7 -4.4 Eco57I restriction endonuclease compare
Dsui_3307 -0.7 -4.2 cytochrome c553 compare
Dsui_0469 -0.7 -1.2 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_3448 -0.7 -2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1676 -0.7 -2.7 biopolymer transport protein compare
Dsui_3033 -0.7 -4.1 acetate kinase compare
Dsui_2047 -0.7 -1.9 chromate transporter, chromate ion transporter family compare
Dsui_0474 -0.7 -1.8 universal stress protein UspA-like protein compare
Dsui_1583 -0.7 -4.5 (4Fe-4S) cluster-containing protein compare
Dsui_0893 -0.7 -1.6 rare lipoprotein A compare
Dsui_2427 -0.7 -3.5 molybdenum cofactor biosynthesis protein A compare
Dsui_1094 -0.7 -1.6 shikimate kinase compare
Dsui_1463 -0.7 -2.2 transcriptional activator of acetoin/glycerol metabolism compare
Dsui_2935 -0.7 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_0871 -0.7 -1.3 hypothetical protein compare
Dsui_2454 -0.7 -2.2 Positive regulator of sigma E activity compare
Dsui_0025 -0.7 -1.6 hypothetical protein compare
Dsui_2783 -0.7 -1.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1582 -0.7 -4.2 Fe-S oxidoreductase compare
Dsui_1932 -0.7 -2.7 transcriptional regulator compare
Dsui_1759 -0.7 -2.0 flagellar hook-basal body complex protein FliE compare
Dsui_2150 -0.7 -2.0 hypothetical protein compare
Dsui_2331 -0.7 -1.5 heat shock protein compare
Dsui_0087 -0.7 -5.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_2196 -0.7 -1.3 ATP-dependent Clp protease, proteolytic subunit ClpP compare
Dsui_3133 -0.7 -0.9 hypothetical protein compare
Dsui_2551 -0.7 -3.0 Helix-destabilising protein compare
Dsui_2920 -0.7 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_1042 -0.7 -2.0 metal-dependent hydrolase compare
Dsui_2826 -0.7 -1.4 hypothetical protein compare
Dsui_2031 -0.7 -1.3 putative thioesterase compare
Dsui_0935 -0.7 -2.0 cytochrome c5 compare
Dsui_1275 -0.7 -1.9 protein-export chaperone SecB compare
Dsui_1584 -0.7 -3.7 hypothetical protein compare
Dsui_3429 -0.6 -1.9 RND family efflux transporter, MFP subunit compare
Dsui_0967 -0.6 -2.0 hypothetical protein compare
Dsui_0086 -0.6 -4.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_0462 -0.6 -3.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_1400 -0.6 -2.6 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_2666 -0.6 -2.0 putative transcriptional regulator compare
Dsui_2590 -0.6 -2.3 Pilin accessory protein (PilO) compare
Dsui_3273 -0.6 -2.4 carbonic anhydrase compare
Dsui_0398 -0.6 -3.1 UDP-glucose-4-epimerase compare
Dsui_2499 -0.6 -1.5 MerE protein compare
Dsui_3032 -0.6 -3.4 phosphotransacetylase compare
Dsui_3319 -0.6 -2.2 uroporphyrin-III C-methyltransferase compare
Dsui_3467 -0.6 -1.1 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2965 -0.6 -0.9 cobalamin biosynthesis protein CbiG compare
Dsui_2891 -0.6 -2.0 hemerythrin-like metal-binding domain-containing protein compare
Dsui_2559 -0.6 -2.0 Protein of unknown function (DUF2523) compare
Dsui_2166 -0.6 -1.4 Fe2+-dicitrate sensor, membrane component compare
Dsui_3343 -0.6 -1.4 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_3014 -0.6 -1.1 outer membrane protein/peptidoglycan-associated (lipo)protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms