Experiment set2H30 for Dechlorosoma suillum PS

Compare to:

Anaerobic growth with lactate carbon source, nitrate electron acceptor

200 most important genes:

  gene name fitness t score description  
Dsui_1647 -6.2 -10.3 oxygen-independent coproporphyrinogen III oxidase compare
Dsui_1460 -5.1 -10.4 cAMP-binding protein compare
Dsui_3034 -5.0 -25.5 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent compare
Dsui_1176 -4.5 -9.9 periplasmic nitrate/nitrite reductase c-type cytochrome, NapC/NirT family compare
Dsui_0007 -4.4 -3.0 cold shock protein compare
Dsui_1576 -4.4 -3.0 dihydrolipoamide dehydrogenase compare
Dsui_2368 -4.2 -4.2 serine O-acetyltransferase compare
Dsui_1970 -4.1 -4.0 metalloendopeptidase-like membrane protein compare
Dsui_2189 -4.0 -2.7 acyl-CoA synthetase (NDP forming) compare
Dsui_0650 -3.9 -3.8 hypothetical protein compare
Dsui_0469 -3.8 -2.6 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_1177 -3.8 -10.6 Ethylbenzene dehydrogenase compare
Dsui_1978 -3.6 -2.4 putative lipoprotein compare
Dsui_1170 -3.5 -1.8 heme exporter protein CcmD compare
Dsui_1577 -3.5 -2.4 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0401 -3.0 -2.6 nucleoside-diphosphate-sugar epimerase compare
Dsui_1578 -2.8 -5.3 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3110 -2.6 -6.8 nitric oxide reductase large subunit compare
Dsui_1581 -2.6 -2.9 response regulator compare
Dsui_3102 -2.6 -3.4 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0613 -2.4 -1.8 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_3109 -2.3 -6.3 cytochrome c, mono- and diheme variants family compare
Dsui_1446 -2.3 -4.4 succinyl-CoA synthetase, alpha subunit compare
Dsui_0099 -2.3 -4.0 putative periplasmic or secreted lipoprotein compare
Dsui_3139 -2.2 -4.5 outer membrane assembly lipoprotein YfgL compare
Dsui_3081 -2.1 -2.0 chaperone protein DnaK compare
Dsui_2717 -2.1 -3.6 RNA polymerase-binding protein DksA compare
Dsui_1321 -2.1 -8.3 ABC-type uncharacterized transport system, permease component compare
Dsui_3240 -1.9 -9.9 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0992 -1.9 -1.6 putative membrane protein compare
Dsui_0507 -1.9 -2.4 uncharacterized protein involved in formation of periplasmic nitrate reductase compare
Dsui_1969 -1.8 -6.3 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_2556 -1.8 -4.8 hypothetical protein compare
Dsui_2816 -1.8 -4.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1640 -1.8 -4.2 hypothetical protein compare
Dsui_1445 -1.8 -3.4 succinyl-CoA synthetase, beta subunit compare
Dsui_0260 -1.8 -6.5 sulfate ABC transporter, permease protein CysT compare
Dsui_2154 -1.8 -3.4 molybdopterin converting factor, large subunit compare
Dsui_3523 -1.7 -3.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0004 -1.7 -6.0 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_0508 -1.7 -11.7 periplasmic nitrate reductase, large subunit compare
Dsui_0255 -1.6 -1.5 hypothetical protein compare
Dsui_1084 -1.6 -9.9 bacteriophage protein gp37 compare
Dsui_0510 -1.6 -3.8 ferredoxin-type protein, NapH/MauN family compare
Dsui_2687 -1.6 -5.9 RIP metalloprotease RseP compare
Dsui_3424 -1.6 -1.6 ATP:cob(I)alamin adenosyltransferase compare
Dsui_3126 -1.5 -5.2 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3054 -1.5 -2.1 phosphate ABC transporter, permease protein PstA compare
Dsui_2127 -1.5 -2.4 flavodoxin reductase family protein compare
Dsui_2673 -1.5 -3.2 hypothetical protein compare
Dsui_0811 -1.5 -5.2 hypothetical protein compare
Dsui_1004 -1.4 -0.9 conserved protein of DIM6/NTAB family compare
Dsui_3521 -1.4 -4.8 membrane-fusion protein compare
Dsui_1929 -1.4 -6.9 Prokaryotic membrane lipoprotein lipid attachment site/Cytochrome D1 heme domain protein compare
Dsui_0258 -1.4 -3.6 sulfate ABC transporter, ATP-binding protein compare
Dsui_0399 -1.4 -2.7 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_1096 -1.4 -7.4 glutamate synthase family protein compare
Dsui_3305 -1.4 -7.8 parallel beta-helix repeat (two copies) compare
Dsui_2868 -1.4 -2.7 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein compare
Dsui_3302 -1.3 -5.7 ABC-type multidrug transport system, ATPase component compare
Dsui_2668 -1.3 -3.0 putative phosphatase compare
Dsui_0509 -1.3 -5.3 MauM/NapG family ferredoxin-type protein compare
Dsui_2433 -1.3 -5.7 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_2027 -1.3 -2.3 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_2046 -1.3 -2.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3393 -1.3 -3.7 Kef-type K+ transport system, membrane component compare
Dsui_0460 -1.3 -2.6 ADP-heptose:LPS heptosyltransferase compare
Dsui_3327 -1.3 -2.2 cytochrome b compare
Dsui_1325 -1.3 -2.3 ADP-ribose pyrophosphatase compare
Dsui_0259 -1.3 -3.5 sulfate ABC transporter, permease protein CysW compare
Dsui_2703 -1.3 -2.9 chromosome segregation protein SMC compare
Dsui_0745 -1.2 -1.8 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_0032 -1.2 -2.0 NAD-dependent protein deacetylase, SIR2 family compare
Dsui_3299 -1.2 -6.5 Peroxiredoxin compare
Dsui_0432 -1.2 -2.7 hypothetical protein compare
Dsui_2152 -1.2 -2.8 molybdenum cofactor synthesis domain protein compare
Dsui_3392 -1.2 -4.9 carboxylate-amine ligase, YbdK family compare
Dsui_3415 -1.2 -4.7 FAD/FMN-dependent dehydrogenase compare
Dsui_3169 -1.2 -3.1 putative metal-binding protein compare
Dsui_3318 -1.2 -6.2 cytochrome c, mono- and diheme variants family compare
Dsui_3300 -1.2 -8.3 ABC-2 type transporter compare
Dsui_3069 -1.2 -2.5 putative membrane protein compare
Dsui_2153 -1.2 -4.3 molybdopterin converting factor, subunit 1 compare
Dsui_0600 -1.2 -1.2 TIGR00251 family protein compare
Dsui_2484 -1.2 -2.4 hydroxyacylglutathione hydrolase compare
Dsui_0608 -1.2 -4.4 nucleoside-diphosphate-sugar epimerase compare
Dsui_2567 -1.2 -8.7 hypothetical protein compare
Dsui_1641 -1.1 -2.8 SirA-like protein compare
Dsui_1398 -1.1 -2.4 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1642 -1.1 -5.3 hypothetical protein compare
Dsui_2260 -1.1 -2.6 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_1930 -1.1 -5.2 transcriptional regulator compare
Dsui_3414 -1.1 -4.1 FAD/FMN-dependent dehydrogenase compare
Dsui_0465 -1.1 -2.3 ADP-heptose:LPS heptosyltransferase compare
Dsui_0893 -1.1 -1.8 rare lipoprotein A compare
Dsui_1827 -1.1 -1.2 hypothetical protein compare
Dsui_1928 -1.1 -3.3 cytochrome c, mono- and diheme variants family compare
Dsui_0751 -1.1 -5.5 Eco57I restriction endonuclease compare
Dsui_0173 -1.1 -1.7 site-specific DNA methylase compare
Dsui_0520 -1.1 -6.4 transcriptional regulator compare
Dsui_1221 -1.1 -3.9 hypothetical protein compare
Dsui_2454 -1.1 -2.6 Positive regulator of sigma E activity compare
Dsui_1525 -1.1 -5.5 sulfate/thiosulfate-binding protein compare
Dsui_1236 -1.1 -5.1 molybdenum cofactor synthesis domain protein compare
Dsui_2599 -1.1 -2.1 hypothetical protein compare
Dsui_0651 -1.0 -2.1 tyrosine recombinase XerC compare
Dsui_1968 -1.0 -5.5 5''/3''-nucleotidase SurE compare
Dsui_2882 -1.0 -2.4 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_3301 -1.0 -4.6 NosL compare
Dsui_3467 -1.0 -1.9 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_3524 -1.0 -3.5 signal transduction histidine kinase compare
Dsui_2386 -1.0 -1.8 pyruvate-formate lyase-activating enzyme compare
Dsui_0962 -1.0 -6.1 collagenase-like protease compare
Dsui_3080 -1.0 -1.2 molecular chaperone GrpE (heat shock protein) compare
Dsui_2275 -1.0 -2.6 putative transcriptional regulator compare
Dsui_3377 -1.0 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0024 -1.0 -2.0 cytochrome c556 compare
Dsui_1235 -1.0 -2.0 hypothetical protein compare
Dsui_0675 -1.0 -1.6 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_1992 -1.0 -1.6 ribosomal protein L9 compare
Dsui_2151 -1.0 -2.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_2199 -1.0 -1.3 bacterial nucleoid DNA-binding protein compare
Dsui_0477 -0.9 -2.1 tol-pal system protein YbgF compare
Dsui_0003 -0.9 -2.8 putative Zn-dependent protease compare
Dsui_2694 -0.9 -1.8 ribosomal protein S2 compare
Dsui_1037 -0.9 -1.0 ribosomal protein L25, Ctc-form compare
Dsui_3306 -0.9 -5.7 hypothetical protein compare
Dsui_1401 -0.9 -3.6 surface lipoprotein compare
Dsui_3457 -0.9 -1.0 K+ transporter compare
Dsui_3319 -0.9 -2.4 uroporphyrin-III C-methyltransferase compare
Dsui_3290 -0.9 -1.4 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_0747 -0.9 -2.4 glutamate--cysteine ligase compare
Dsui_1947 -0.9 -1.1 nucleotide sugar dehydrogenase compare
Dsui_1759 -0.9 -2.3 flagellar hook-basal body complex protein FliE compare
Dsui_3304 -0.9 -5.4 NADH:ubiquinone oxidoreductase chain I-like protein compare
Dsui_3033 -0.9 -5.8 acetate kinase compare
Dsui_0963 -0.9 -3.2 collagenase-like protease compare
Dsui_2933 -0.9 -2.1 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0740 -0.9 -3.8 methionine biosynthesis protein MetW compare
Dsui_1402 -0.9 -2.4 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1857 -0.8 -1.4 putative permease, DMT superfamily compare
Dsui_3253 -0.8 -3.8 Protein of unknown function (DUF3579) compare
Dsui_1540 -0.8 -3.1 NAD(FAD)-dependent dehydrogenase compare
Dsui_1932 -0.8 -2.6 transcriptional regulator compare
Dsui_0391 -0.8 -1.2 Protein of unknown function (DUF3426) compare
Dsui_2745 -0.8 -1.6 methyl-accepting chemotaxis protein compare
Dsui_3120 -0.8 -2.5 cAMP-binding protein compare
Dsui_2306 -0.8 -1.7 transcriptional regulator compare
Dsui_2767 -0.8 -1.6 glutaredoxin-like protein compare
Dsui_3520 -0.8 -5.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1403 -0.8 -1.7 putative NTP binding protein (contains STAS domain) compare
Dsui_3307 -0.8 -4.0 cytochrome c553 compare
Dsui_1400 -0.8 -3.8 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_3375 -0.8 -0.8 hypothetical protein compare
Dsui_3220 -0.8 -1.1 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_2457 -0.8 -3.3 GTP-binding protein LepA compare
Dsui_0533 -0.8 -1.9 cobyrinic acid a,c-diamide synthase compare
Dsui_1465 -0.8 -2.5 hypothetical protein compare
Dsui_2549 -0.8 -4.9 hypothetical protein compare
Dsui_3343 -0.8 -1.6 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_1399 -0.8 -3.5 conserved hypothetical integral membrane protein compare
Dsui_2181 -0.8 -2.0 DNA-binding domain-containing protein, AraC-type compare
Dsui_1591 -0.8 -1.1 Xaa-Pro aminopeptidase compare
Dsui_2191 -0.8 -1.4 squalene-associated FAD-dependent desaturase compare
Dsui_2240 -0.8 -1.9 PAS domain S-box compare
Dsui_3532 -0.8 -3.6 Protein of unknown function (DUF3106) compare
Dsui_1002 -0.8 -1.4 prolyl oligopeptidase family protein compare
Dsui_1582 -0.8 -3.1 Fe-S oxidoreductase compare
Dsui_2651 -0.7 -1.0 ankyrin repeat-containing protein compare
Dsui_2873 -0.7 -0.9 Peroxiredoxin compare
Dsui_3522 -0.7 -2.6 outer membrane protein compare
Dsui_1583 -0.7 -4.4 (4Fe-4S) cluster-containing protein compare
Dsui_2404 -0.7 -1.7 ribosomal-protein-alanine acetyltransferase compare
Dsui_1198 -0.7 -3.4 apolipoprotein N-acyltransferase compare
Dsui_2487 -0.7 -2.8 hypothetical protein compare
Dsui_0964 -0.7 -2.5 putative lipid carrier protein compare
Dsui_2908 -0.7 -2.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0086 -0.7 -4.8 nucleoside-diphosphate-sugar epimerase compare
Dsui_3273 -0.7 -2.4 carbonic anhydrase compare
Dsui_2604 -0.7 -2.1 hypothetical protein compare
Dsui_0810 -0.7 -3.5 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_3032 -0.7 -4.6 phosphotransacetylase compare
Dsui_1931 -0.7 -3.3 transcriptional regulator compare
Dsui_3506 -0.7 -3.1 putative permease, DMT superfamily compare
Dsui_2041 -0.7 -1.4 enoyl-CoA hydratase/carnithine racemase compare
Dsui_0246 -0.7 -4.0 mraZ protein compare
Dsui_2197 -0.7 -4.4 endopeptidase Clp ATP-binding regulatory subunit ClpX compare
Dsui_2150 -0.7 -1.5 hypothetical protein compare
Dsui_2501 -0.7 -1.6 TniQ protein compare
Dsui_1377 -0.7 -3.7 phasin family protein compare
Dsui_1674 -0.7 -1.9 EAL domain-containing protein compare
Dsui_2496 -0.7 -1.3 Membrane transport protein MerF compare
Dsui_0087 -0.7 -4.7 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_2783 -0.7 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0005 -0.7 -4.1 putative secreted protein compare
Dsui_1860 -0.7 -1.7 methyl-accepting chemotaxis protein compare
Dsui_2086 -0.6 -1.2 cytochrome c compare
Dsui_2401 -0.6 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1541 -0.6 -3.3 cytochrome c553 compare
Dsui_0624 -0.6 -1.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in anaerobic experiments

For anaerobic Sodium D,L-Lactate across organisms